RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 A0A1W2PPZ6 126 aa6□□□□□ -1.45
HMGB1P6-201ENST00000569046 SOX1O00570 391 aaPredicted RBP6□□□□□ -1.45
HMGB1P6-201ENST00000569046 ADAM11O75078 769 aa6□□□□□ -1.45
HMGB1P6-201ENST00000569046 WISP1O95388 367 aa6□□□□□ -1.45
HMGB1P6-201ENST00000569046 GATA4P43694 442 aa6□□□□□ -1.45
HMGB1P6-201ENST00000569046 MAP4K3Q8IVH8 894 aa6□□□□□ -1.45
HMGB1P6-201ENST00000569046 GLIS3Q8NEA6 775 aa6□□□□□ -1.45
HMGB1P6-201ENST00000569046 FOXD4L4Q8WXT5 416 aaPredicted RBP6□□□□□ -1.45
HMGB1P6-201ENST00000569046 SLC7A3Q8WY07 619 aa6□□□□□ -1.45
HMGB1P6-201ENST00000569046 GZF1Q9H116 711 aaPredicted RBP6□□□□□ -1.45
HMGB1P6-201ENST00000569046 EHD4Q9H223 541 aa6□□□□□ -1.45
HMGB1P6-201ENST00000569046 ABCB6Q9NP58 842 aa6□□□□□ -1.45
HMGB1P6-201ENST00000569046 ALX3O95076 343 aa5.99□□□□□ -1.45
HMGB1P6-201ENST00000569046 P4HBP07237 508 aaKnown RBP5.99□□□□□ -1.45
HMGB1P6-201ENST00000569046 ESRRAP11474 423 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P6-201ENST00000569046 NOS3P29474 1203 aa5.99□□□□□ -1.45
HMGB1P6-201ENST00000569046 CD68P34810 354 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P6-201ENST00000569046 MAPK8P45983 427 aa5.99□□□□□ -1.45
HMGB1P6-201ENST00000569046 CABP4P57796 275 aa5.99□□□□□ -1.45
HMGB1P6-201ENST00000569046 PIP4K2BP78356 416 aa5.99□□□□□ -1.45
HMGB1P6-201ENST00000569046 DOC2BQ14184 412 aa5.99□□□□□ -1.45
HMGB1P6-201ENST00000569046 GRM2Q14416 872 aa5.99□□□□□ -1.45
HMGB1P6-201ENST00000569046 SEC31BQ9NQW1 1179 aa5.99□□□□□ -1.45
HMGB1P6-201ENST00000569046 FAM177BA6PVY3 158 aa5.98□□□□□ -1.45
HMGB1P6-201ENST00000569046 GADD45BO75293 160 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P6-201ENST00000569046 IREB2P48200 963 aaKnown RBP5.98□□□□□ -1.45
HMGB1P6-201ENST00000569046 NRG1Q02297 640 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P6-201ENST00000569046 IKBKEQ14164 716 aa5.98□□□□□ -1.45
HMGB1P6-201ENST00000569046 ZNF423Q2M1K9 1284 aa5.98□□□□□ -1.45
HMGB1P6-201ENST00000569046 PRPF40BQ6NWY9 871 aaKnown RBP5.98□□□□□ -1.45
HMGB1P6-201ENST00000569046 FAM117BQ6P1L5 589 aa5.98□□□□□ -1.45
HMGB1P6-201ENST00000569046 DNAJC14Q6Y2X3 702 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P6-201ENST00000569046 TXNRD3Q86VQ6 643 aa5.98□□□□□ -1.45
HMGB1P6-201ENST00000569046 AGGF1Q8N302 714 aaeCLIP5.98□□□□□ -1.457e-10■■■■■ 44.1
HMGB1P6-201ENST00000569046 KLHL23Q8NBE8 558 aa5.98□□□□□ -1.45
HMGB1P6-201ENST00000569046 WFDC12Q8WWY7 111 aa5.98□□□□□ -1.45
HMGB1P6-201ENST00000569046 WNT8BQ93098 351 aa5.98□□□□□ -1.45
HMGB1P6-201ENST00000569046 MRPL18Q9H0U6 180 aaKnown RBP5.98□□□□□ -1.45
HMGB1P6-201ENST00000569046 TPSG1Q9NRR2 321 aa5.98□□□□□ -1.45
HMGB1P6-201ENST00000569046 CECR2Q9BXF3 1484 aa5.97□□□□□ -1.45
HMGB1P6-201ENST00000569046 ANKRD33BA6NCL7 494 aa5.97□□□□□ -1.45
HMGB1P6-201ENST00000569046 F8W735 103 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P6-201ENST00000569046 ITPKAP23677 461 aa5.97□□□□□ -1.45
HMGB1P6-201ENST00000569046 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.97□□□□□ -1.45
HMGB1P6-201ENST00000569046 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.97□□□□□ -1.45
HMGB1P6-201ENST00000569046 TMEM130Q8N3G9 435 aa5.97□□□□□ -1.45
HMGB1P6-201ENST00000569046 UBASH3BQ8TF42 649 aa5.97□□□□□ -1.45
HMGB1P6-201ENST00000569046 SSBP4Q9BWG4 385 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P6-201ENST00000569046 ZNF576Q9H609 170 aa5.97□□□□□ -1.45
HMGB1P6-201ENST00000569046 OSGEPQ9NPF4 335 aa5.97□□□□□ -1.45
HMGB1P6-201ENST00000569046 TMEM238LA0A1B0GVL6 79 aa5.96□□□□□ -1.46
HMGB1P6-201ENST00000569046 FURINP09958 794 aa5.96□□□□□ -1.46
HMGB1P6-201ENST00000569046 NLRP12P59046 1061 aa5.96□□□□□ -1.46
HMGB1P6-201ENST00000569046 PCDH1Q08174 1060 aa5.96□□□□□ -1.46
HMGB1P6-201ENST00000569046 C19orf57Q0VDD7 668 aa5.96□□□□□ -1.46
HMGB1P6-201ENST00000569046 SUZ12Q15022 739 aaKnown RBP5.96□□□□□ -1.46
HMGB1P6-201ENST00000569046 KIAA1211Q6ZU35 1233 aa5.96□□□□□ -1.46
HMGB1P6-201ENST00000569046 MEGF10Q96KG7 1140 aa5.96□□□□□ -1.46
HMGB1P6-201ENST00000569046 BCO2Q9BYV7 579 aa5.96□□□□□ -1.46
HMGB1P6-201ENST00000569046 CLEC4MQ9H2X3 399 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P6-201ENST00000569046 AKTIPQ9H8T0 292 aa5.96□□□□□ -1.46
HMGB1P6-201ENST00000569046 NLRP2Q9NX02 1062 aa5.96□□□□□ -1.46
HMGB1P6-201ENST00000569046 DUOXA2Q1HG44 320 aa5.95□□□□□ -1.46
HMGB1P6-201ENST00000569046 NXPE4Q6UWF7 544 aa5.95□□□□□ -1.46
HMGB1P6-201ENST00000569046 ACAD11Q709F0 780 aa5.95□□□□□ -1.46
HMGB1P6-201ENST00000569046 OSBPL7Q9BZF2 842 aa5.95□□□□□ -1.46
HMGB1P6-201ENST00000569046 NRSN2Q9GZP1 204 aa5.95□□□□□ -1.46
HMGB1P6-201ENST00000569046 RNF19AQ9NV58 838 aa5.95□□□□□ -1.46
HMGB1P6-201ENST00000569046 DLGAP3O95886 979 aa5.94□□□□□ -1.46
HMGB1P6-201ENST00000569046 LDHBP07195 334 aaKnown RBP5.94□□□□□ -1.46
HMGB1P6-201ENST00000569046 FCGRTP55899 365 aa5.94□□□□□ -1.46
HMGB1P6-201ENST00000569046 GSTM4Q03013 218 aa5.94□□□□□ -1.46
HMGB1P6-201ENST00000569046 FAAP100Q0VG06 881 aa5.94□□□□□ -1.46
HMGB1P6-201ENST00000569046 RSPO4Q2I0M5 234 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P6-201ENST00000569046 Q6ZS46 218 aa5.94□□□□□ -1.46
HMGB1P6-201ENST00000569046 NPAS4Q8IUM7 802 aa5.94□□□□□ -1.46
HMGB1P6-201ENST00000569046 DCAF11Q8TEB1 546 aa5.94□□□□□ -1.46
HMGB1P6-201ENST00000569046 SOX17Q9H6I2 414 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P6-201ENST00000569046 TRAK1Q9UPV9 953 aa5.94□□□□□ -1.46
HMGB1P6-201ENST00000569046 SCRIBQ14160 1630 aa5.93□□□□□ -1.46
HMGB1P6-201ENST00000569046 B3GALT4O96024 378 aa5.93□□□□□ -1.46
HMGB1P6-201ENST00000569046 CTSBP07858 339 aa5.93□□□□□ -1.46
HMGB1P6-201ENST00000569046 ARL4DP49703 201 aa5.93□□□□□ -1.46
HMGB1P6-201ENST00000569046 ZNF157P51786 506 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P6-201ENST00000569046 PTPN12Q05209 780 aaKnown RBP5.93□□□□□ -1.46
HMGB1P6-201ENST00000569046 NKAPLQ5M9Q1 402 aa5.93□□□□□ -1.46
HMGB1P6-201ENST00000569046 DZIP1LQ8IYY4 767 aaKnown RBP5.93□□□□□ -1.46
HMGB1P6-201ENST00000569046 FBF1Q8TES7 1133 aa5.93□□□□□ -1.46
HMGB1P6-201ENST00000569046 UBL7Q96S82 380 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P6-201ENST00000569046 LOC100289279A0A1B0GTE1 492 aa5.92□□□□□ -1.46
HMGB1P6-201ENST00000569046 ECEL1O95672 775 aa5.92□□□□□ -1.46
HMGB1P6-201ENST00000569046 ITGB7P26010 798 aa5.92□□□□□ -1.46
HMGB1P6-201ENST00000569046 CCDC27Q2M243 656 aa5.92□□□□□ -1.46
HMGB1P6-201ENST00000569046 ALG1LQ6GMV1 187 aa5.92□□□□□ -1.46
HMGB1P6-201ENST00000569046 C3orf58Q8NDZ4 430 aa5.92□□□□□ -1.46
HMGB1P6-201ENST00000569046 TP53INP1Q96A56 240 aa5.92□□□□□ -1.46
HMGB1P6-201ENST00000569046 TRIM56Q9BRZ2 755 aaKnown RBP5.92□□□□□ -1.46
HMGB1P6-201ENST00000569046 USP26Q9BXU7 913 aa5.92□□□□□ -1.46
HMGB1P6-201ENST00000569046 EIF4G1Q04637 1599 aaKnown RBP5.92□□□□□ -1.46
HMGB1P6-201ENST00000569046 GLB1P16278 677 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms