RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 LINC01387J3KSC0 135 aa9.5□□□□□ -0.89
CYLD-213ENST00000568744 ITPKAP23677 461 aa9.5□□□□□ -0.89
CYLD-213ENST00000568744 PCDH1Q08174 1060 aa9.5□□□□□ -0.89
CYLD-213ENST00000568744 MSL1Q68DK7 614 aa9.5□□□□□ -0.89
CYLD-213ENST00000568744 FAM117BQ6P1L5 589 aa9.5□□□□□ -0.89
CYLD-213ENST00000568744 DMRTC2Q8IXT2 367 aaPredicted RBP9.5□□□□□ -0.89
CYLD-213ENST00000568744 CACTIN-AS1Q8N1I8 211 aa9.5□□□□□ -0.89
CYLD-213ENST00000568744 SLC7A3Q8WY07 619 aa9.5□□□□□ -0.89
CYLD-213ENST00000568744 CLEC4MQ9H2X3 399 aaPredicted RBP9.5□□□□□ -0.89
CYLD-213ENST00000568744 ZNF576Q9H609 170 aa9.5□□□□□ -0.89
CYLD-213ENST00000568744 SOX13Q9UN79 622 aa9.5□□□□□ -0.89
CYLD-213ENST00000568744 PPME1Q9Y570 386 aa9.5□□□□□ -0.89
CYLD-213ENST00000568744 RANGAP1P46060 587 aaPredicted RBP9.49□□□□□ -0.89
CYLD-213ENST00000568744 IKBKEQ14164 716 aa9.49□□□□□ -0.89
CYLD-213ENST00000568744 TAF1CQ15572 869 aaPredicted RBP9.49□□□□□ -0.89
CYLD-213ENST00000568744 TRAPPC3LQ5T215 181 aa9.49□□□□□ -0.89
CYLD-213ENST00000568744 ZFYVE1Q9HBF4 777 aa9.49□□□□□ -0.89
CYLD-213ENST00000568744 ARHGEF15O94989 841 aa9.48□□□□□ -0.89
CYLD-213ENST00000568744 DGKGP49619 791 aa9.48□□□□□ -0.89
CYLD-213ENST00000568744 VN1R5Q7Z5H4 357 aa9.48□□□□□ -0.89
CYLD-213ENST00000568744 PRDM6Q9NQX0 595 aa9.48□□□□□ -0.89
CYLD-213ENST00000568744 H3BRJ5 948 aa9.47□□□□□ -0.89
CYLD-213ENST00000568744 BAG6P46379 1132 aa9.47□□□□□ -0.89
CYLD-213ENST00000568744 SNRPNP63162 240 aaKnown RBP9.47□□□□□ -0.89
CYLD-213ENST00000568744 PTPN12Q05209 780 aaKnown RBP9.47□□□□□ -0.89
CYLD-213ENST00000568744 CCDC85BQ15834 202 aaPredicted RBP9.47□□□□□ -0.89
CYLD-213ENST00000568744 SCAMP3O14828 347 aaKnown RBP9.46□□□□□ -0.9
CYLD-213ENST00000568744 NID1P14543 1247 aa9.46□□□□□ -0.9
CYLD-213ENST00000568744 INSM1Q01101 510 aaPredicted RBP9.46□□□□□ -0.9
CYLD-213ENST00000568744 ZNF423Q2M1K9 1284 aa9.46□□□□□ -0.9
CYLD-213ENST00000568744 CARD10Q9BWT7 1032 aa9.46□□□□□ -0.9
CYLD-213ENST00000568744 SEC31BQ9NQW1 1179 aa9.46□□□□□ -0.9
CYLD-213ENST00000568744 PPM1HQ9ULR3 514 aa9.46□□□□□ -0.9
CYLD-213ENST00000568744 ESRRAP11474 423 aaPredicted RBP9.45□□□□□ -0.9
CYLD-213ENST00000568744 TCF3P15923 654 aa9.45□□□□□ -0.9
CYLD-213ENST00000568744 ZNF76P36508 570 aa9.45□□□□□ -0.9
CYLD-213ENST00000568744 ARL4DP49703 201 aa9.45□□□□□ -0.9
CYLD-213ENST00000568744 FAAP100Q0VG06 881 aa9.45□□□□□ -0.9
CYLD-213ENST00000568744 MAP3K11Q16584 847 aa9.45□□□□□ -0.9
CYLD-213ENST00000568744 C9orf131Q5VYM1 1079 aa9.45□□□□□ -0.9
CYLD-213ENST00000568744 PODNQ7Z5L7 613 aa9.45□□□□□ -0.9
CYLD-213ENST00000568744 CEP44Q9C0F1 390 aa9.45□□□□□ -0.9
CYLD-213ENST00000568744 MKL2Q9ULH7 1088 aa9.45□□□□□ -0.9
CYLD-213ENST00000568744 USP31Q70CQ4 1352 aa9.45□□□□□ -0.9
CYLD-213ENST00000568744 SOX1O00570 391 aaPredicted RBP9.44□□□□□ -0.9
CYLD-213ENST00000568744 HOXB4P17483 251 aaPredicted RBP9.44□□□□□ -0.9
CYLD-213ENST00000568744 GSTM4Q03013 218 aa9.44□□□□□ -0.9
CYLD-213ENST00000568744 PPP2R3AQ06190 1150 aa9.44□□□□□ -0.9
CYLD-213ENST00000568744 RPS26P11Q5JNZ5 115 aaPredicted RBP9.44□□□□□ -0.9
CYLD-213ENST00000568744 HGSNATQ68CP4 663 aa9.44□□□□□ -0.9
CYLD-213ENST00000568744 PLVAPQ9BX97 442 aa9.44□□□□□ -0.9
CYLD-213ENST00000568744 FSCN2O14926 492 aa9.43□□□□□ -0.9
CYLD-213ENST00000568744 ST13P50502 369 aaKnown RBP9.43□□□□□ -0.9
CYLD-213ENST00000568744 COL9A3Q14050 684 aaPredicted RBP9.43□□□□□ -0.9
CYLD-213ENST00000568744 LDLRAD1Q5T700 205 aa9.43□□□□□ -0.9
CYLD-213ENST00000568744 DDX54Q8TDD1 881 aaKnown RBP9.43□□□□□ -0.9
CYLD-213ENST00000568744 RNF34Q969K3 372 aa9.43□□□□□ -0.9
CYLD-213ENST00000568744 TMEM39AQ9NV64 488 aa9.43□□□□□ -0.9
CYLD-213ENST00000568744 CNTNAP5Q8WYK1 1306 aa9.42□□□□□ -0.9
CYLD-213ENST00000568744 PIK3R2O00459 728 aa9.42□□□□□ -0.9
CYLD-213ENST00000568744 GNB5O14775 395 aa9.42□□□□□ -0.9
CYLD-213ENST00000568744 B3GALT4O96024 378 aa9.42□□□□□ -0.9
CYLD-213ENST00000568744 CELA3AP09093 270 aa9.42□□□□□ -0.9
CYLD-213ENST00000568744 RAC1P63000 192 aa9.42□□□□□ -0.9
CYLD-213ENST00000568744 PIP4K2BP78356 416 aa9.42□□□□□ -0.9
CYLD-213ENST00000568744 C19orf57Q0VDD7 668 aa9.42□□□□□ -0.9
CYLD-213ENST00000568744 TRIM11Q96F44 468 aa9.42□□□□□ -0.9
CYLD-213ENST00000568744 GGT7Q9UJ14 662 aa9.42□□□□□ -0.9
CYLD-213ENST00000568744 ADAMTS8Q9UP79 889 aa9.42□□□□□ -0.9
CYLD-213ENST00000568744 F6X3S4 739 aa9.41□□□□□ -0.9
CYLD-213ENST00000568744 FAM229AH3BQW9 127 aa9.41□□□□□ -0.9
CYLD-213ENST00000568744 LORP23490 312 aaPredicted RBP9.41□□□□□ -0.9
CYLD-213ENST00000568744 LINC00114Q6XXX2 140 aa9.41□□□□□ -0.9
CYLD-213ENST00000568744 SV2BQ7L1I2 683 aa9.41□□□□□ -0.9
CYLD-213ENST00000568744 HS2ST1Q7LGA3 356 aa9.41□□□□□ -0.9
CYLD-213ENST00000568744 NECAB3Q96P71 396 aaPredicted RBP9.41□□□□□ -0.9
CYLD-213ENST00000568744 TRIM56Q9BRZ2 755 aaKnown RBP9.41□□□□□ -0.9
CYLD-213ENST00000568744 SPDYE3A6NKU9 549 aa9.4□□□□□ -0.9
CYLD-213ENST00000568744 HDLBPQ00341 1268 aaKnown RBP9.4□□□□□ -0.9
CYLD-213ENST00000568744 FANCCQ00597 558 aa9.4□□□□□ -0.9
CYLD-213ENST00000568744 TRIM28Q13263 835 aaKnown RBP9.4□□□□□ -0.9
CYLD-213ENST00000568744 SETDB1Q15047 1291 aa9.4□□□□□ -0.9
CYLD-213ENST00000568744 BEND7Q8N7W2 519 aaPredicted RBP9.4□□□□□ -0.9
CYLD-213ENST00000568744 KLHDC7BQ96G42 594 aa9.4□□□□□ -0.9
CYLD-213ENST00000568744 CBX8Q9HC52 389 aa9.4□□□□□ -0.9
CYLD-213ENST00000568744 METTL5Q9NRN9 209 aaKnown RBP9.4□□□□□ -0.9
CYLD-213ENST00000568744 A0A0A0MRY4 1105 aa9.39□□□□□ -0.91
CYLD-213ENST00000568744 ENC1O14682 589 aa9.39□□□□□ -0.91
CYLD-213ENST00000568744 NLRP12P59046 1061 aa9.39□□□□□ -0.91
CYLD-213ENST00000568744 WNT8BQ93098 351 aa9.39□□□□□ -0.91
CYLD-213ENST00000568744 USP26Q9BXU7 913 aa9.39□□□□□ -0.91
CYLD-213ENST00000568744 OSGEPQ9NPF4 335 aa9.39□□□□□ -0.91
CYLD-213ENST00000568744 SAMM50Q9Y512 469 aa9.39□□□□□ -0.91
CYLD-213ENST00000568744 PAGE1O75459 146 aa9.38□□□□□ -0.91
CYLD-213ENST00000568744 LMNB1P20700 586 aa9.38□□□□□ -0.91
CYLD-213ENST00000568744 PRRT3Q5FWE3 981 aa9.38□□□□□ -0.91
CYLD-213ENST00000568744 RELL1Q8IUW5 271 aa9.38□□□□□ -0.91
CYLD-213ENST00000568744 MAP4K3Q8IVH8 894 aa9.38□□□□□ -0.91
CYLD-213ENST00000568744 SULF2Q8IWU5 870 aa9.38□□□□□ -0.91
CYLD-213ENST00000568744 KLHL23Q8NBE8 558 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms