RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 ZBTB7BO15156 539 aaPredicted RBP15.36■□□□□ 0.05
VPS9D1-207ENST00000568691 PPP1R12BO60237 982 aaPredicted RBP15.36■□□□□ 0.05
VPS9D1-207ENST00000568691 PDE8AO60658 829 aa15.36■□□□□ 0.05
VPS9D1-207ENST00000568691 PCCAP05165 728 aaPredicted RBP15.36■□□□□ 0.05
VPS9D1-207ENST00000568691 CCT4P50991 539 aaKnown RBP15.36■□□□□ 0.05
VPS9D1-207ENST00000568691 RIPK4P57078 832 aa15.36■□□□□ 0.05
VPS9D1-207ENST00000568691 HDGFL1Q5TGJ6 251 aa15.36■□□□□ 0.05
VPS9D1-207ENST00000568691 TTLL5Q6EMB2 1281 aa15.36■□□□□ 0.05
VPS9D1-207ENST00000568691 OTUD7BQ6GQQ9 843 aa15.36■□□□□ 0.05
VPS9D1-207ENST00000568691 MTMR14Q8NCE2 650 aa15.36■□□□□ 0.05
VPS9D1-207ENST00000568691 ELP3Q9H9T3 547 aa15.36■□□□□ 0.05
VPS9D1-207ENST00000568691 CLRN2A0PK11 232 aa15.35■□□□□ 0.05
VPS9D1-207ENST00000568691 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.35■□□□□ 0.05
VPS9D1-207ENST00000568691 OPTNQ96CV9 577 aa15.35■□□□□ 0.05
VPS9D1-207ENST00000568691 IRS2Q9Y4H2 1338 aa15.35■□□□□ 0.05
VPS9D1-207ENST00000568691 NEFMP07197 916 aa15.34■□□□□ 0.05
VPS9D1-207ENST00000568691 MMP14P50281 582 aa15.34■□□□□ 0.05
VPS9D1-207ENST00000568691 GTF2IP78347 998 aa15.34■□□□□ 0.05
VPS9D1-207ENST00000568691 TAF1CQ15572 869 aaPredicted RBP15.34■□□□□ 0.05
VPS9D1-207ENST00000568691 PRMT6Q96LA8 375 aaPredicted RBP15.34■□□□□ 0.05
VPS9D1-207ENST00000568691 PHAXQ9H814 394 aaKnown RBP15.34■□□□□ 0.05
VPS9D1-207ENST00000568691 BSDC1Q9NW68 430 aaPredicted RBP15.34■□□□□ 0.05
VPS9D1-207ENST00000568691 DBF4Q9UBU7 674 aaPredicted RBP15.34■□□□□ 0.05
VPS9D1-207ENST00000568691 PPP2R3BQ9Y5P8 575 aa15.34■□□□□ 0.05
VPS9D1-207ENST00000568691 VCANP13611 3396 aa15.33■□□□□ 0.05
VPS9D1-207ENST00000568691 LACTBP83111 547 aaPredicted RBP15.33■□□□□ 0.04
VPS9D1-207ENST00000568691 WDR43Q15061 677 aaKnown RBP eCLIP15.33■□□□□ 0.04
VPS9D1-207ENST00000568691 DLGAP5Q15398 846 aa15.33■□□□□ 0.04
VPS9D1-207ENST00000568691 ANKRD13AQ8IZ07 590 aa15.33■□□□□ 0.04
VPS9D1-207ENST00000568691 MYD88Q99836 296 aa15.33■□□□□ 0.04
VPS9D1-207ENST00000568691 GREM2Q9H772 168 aa15.33■□□□□ 0.04
VPS9D1-207ENST00000568691 SPTBN5Q9NRC6 3674 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-207ENST00000568691 SPDYE2BA6NHP3 402 aa15.32■□□□□ 0.04
VPS9D1-207ENST00000568691 SPDYE6P0CI01 402 aa15.32■□□□□ 0.04
VPS9D1-207ENST00000568691 TMPOP42166 694 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-207ENST00000568691 IREB2P48200 963 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-207ENST00000568691 TTLL11Q8NHH1 800 aa15.32■□□□□ 0.04
VPS9D1-207ENST00000568691 TEPSINQ96N21 525 aa15.32■□□□□ 0.04
VPS9D1-207ENST00000568691 COL25A1Q9BXS0 654 aaPredicted RBP15.32■□□□□ 0.04
VPS9D1-207ENST00000568691 ZFYVE28Q9HCC9 887 aa15.32■□□□□ 0.04
VPS9D1-207ENST00000568691 MAPK8IP3Q9UPT6 1336 aa15.32■□□□□ 0.04
VPS9D1-207ENST00000568691 CCL15-CCL14A0A0B4J2E2 113 aa15.31■□□□□ 0.04
VPS9D1-207ENST00000568691 SNAP23O00161 211 aa15.31■□□□□ 0.04
VPS9D1-207ENST00000568691 GJA8P48165 433 aa15.31■□□□□ 0.04
VPS9D1-207ENST00000568691 CTSWP56202 376 aa15.31■□□□□ 0.04
VPS9D1-207ENST00000568691 RASA3Q14644 834 aa15.31■□□□□ 0.04
VPS9D1-207ENST00000568691 CCL15Q16663 113 aa15.31■□□□□ 0.04
VPS9D1-207ENST00000568691 SUPT20HL1Q3ZLR7 823 aa15.31■□□□□ 0.04
VPS9D1-207ENST00000568691 CFAP100Q494V2 611 aa15.31■□□□□ 0.04
VPS9D1-207ENST00000568691 CCDC191Q8NCU4 936 aa15.31■□□□□ 0.04
VPS9D1-207ENST00000568691 HYPKQ9NX55 129 aa15.31■□□□□ 0.04
VPS9D1-207ENST00000568691 A0A1W2PPC1 479 aa15.3■□□□□ 0.04
VPS9D1-207ENST00000568691 TLR2O60603 784 aa15.3■□□□□ 0.04
VPS9D1-207ENST00000568691 ECM2O94769 699 aaPredicted RBP15.3■□□□□ 0.04
VPS9D1-207ENST00000568691 HOXB7P09629 217 aa15.3■□□□□ 0.04
VPS9D1-207ENST00000568691 Q7L0L9 218 aa15.3■□□□□ 0.04
VPS9D1-207ENST00000568691 STAP2Q9UGK3 403 aa15.3■□□□□ 0.04
VPS9D1-207ENST00000568691 TRIM35Q9UPQ4 493 aa15.3■□□□□ 0.04
VPS9D1-207ENST00000568691 SPEF2Q9C093 1822 aa15.29■□□□□ 0.04
VPS9D1-207ENST00000568691 GJB1P08034 283 aa15.29■□□□□ 0.04
VPS9D1-207ENST00000568691 VGLL4Q14135 290 aa15.29■□□□□ 0.04
VPS9D1-207ENST00000568691 RIC3Q7Z5B4 369 aa15.29■□□□□ 0.04
VPS9D1-207ENST00000568691 TRIM47Q96LD4 638 aa15.29■□□□□ 0.04
VPS9D1-207ENST00000568691 CDC5LQ99459 802 aaKnown RBP15.29■□□□□ 0.04
VPS9D1-207ENST00000568691 VEZTQ9HBM0 779 aa15.29■□□□□ 0.04
VPS9D1-207ENST00000568691 CD209Q9NNX6 404 aa15.29■□□□□ 0.04
VPS9D1-207ENST00000568691 LEMD3Q9Y2U8 911 aa15.29■□□□□ 0.04
VPS9D1-207ENST00000568691 ECM29Q5VYK3 1845 aa15.29■□□□□ 0.04
VPS9D1-207ENST00000568691 BTBD19C9JJ37 291 aa15.28■□□□□ 0.04
VPS9D1-207ENST00000568691 F8W031 263 aaPredicted RBP15.28■□□□□ 0.04
VPS9D1-207ENST00000568691 CCL5P13501 91 aa15.28■□□□□ 0.04
VPS9D1-207ENST00000568691 ARHGEF6Q15052 776 aa15.28■□□□□ 0.04
VPS9D1-207ENST00000568691 DUSP27Q5VZP5 1158 aa15.28■□□□□ 0.04
VPS9D1-207ENST00000568691 CWC25Q9NXE8 425 aaPredicted RBP15.28■□□□□ 0.04
VPS9D1-207ENST00000568691 IGKV5-2P06315 115 aa15.27■□□□□ 0.04
VPS9D1-207ENST00000568691 GTF2A2P52657 109 aa15.27■□□□□ 0.04
VPS9D1-207ENST00000568691 C17orf99Q6UX52 265 aa15.27■□□□□ 0.04
VPS9D1-207ENST00000568691 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.27■□□□□ 0.04
VPS9D1-207ENST00000568691 HTATIP2Q9BUP3 242 aa15.27■□□□□ 0.04
VPS9D1-207ENST00000568691 SRRDQ9UH36 339 aa15.27■□□□□ 0.04
VPS9D1-207ENST00000568691 ADGRA2Q96PE1 1338 aa15.26■□□□□ 0.03
VPS9D1-207ENST00000568691 HSP90B1P14625 803 aaKnown RBP15.26■□□□□ 0.03
VPS9D1-207ENST00000568691 OSBPP22059 807 aa15.26■□□□□ 0.03
VPS9D1-207ENST00000568691 METTL22Q9BUU2 404 aaPredicted RBP15.26■□□□□ 0.03
VPS9D1-207ENST00000568691 JAG2Q9Y219 1238 aa15.26■□□□□ 0.03
VPS9D1-207ENST00000568691 LAS1LQ9Y4W2 734 aaKnown RBP15.26■□□□□ 0.03
VPS9D1-207ENST00000568691 NR2E3Q9Y5X4 410 aa15.26■□□□□ 0.03
VPS9D1-207ENST00000568691 SPDYE5A6NIY4 337 aa15.25■□□□□ 0.03
VPS9D1-207ENST00000568691 GRK4P32298 578 aa15.25■□□□□ 0.03
VPS9D1-207ENST00000568691 PRMT2P55345 433 aa15.25■□□□□ 0.03
VPS9D1-207ENST00000568691 GOLGA2Q08379 1002 aa15.25■□□□□ 0.03
VPS9D1-207ENST00000568691 SPDYE2Q495Y8 402 aa15.25■□□□□ 0.03
VPS9D1-207ENST00000568691 DEFB123Q8N688 67 aa15.25■□□□□ 0.03
VPS9D1-207ENST00000568691 U2AF1L4Q8WU68 220 aaKnown RBP15.25■□□□□ 0.03
VPS9D1-207ENST00000568691 GDF15Q99988 308 aa15.25■□□□□ 0.03
VPS9D1-207ENST00000568691 MTMR10Q9NXD2 777 aa15.25■□□□□ 0.03
VPS9D1-207ENST00000568691 ZNF70Q9UC06 446 aaPredicted RBP15.25■□□□□ 0.03
VPS9D1-207ENST00000568691 STXBP5LQ9Y2K9 1186 aa15.25■□□□□ 0.03
VPS9D1-207ENST00000568691 RIPOR2Q9Y4F9 1068 aa15.25■□□□□ 0.03
VPS9D1-207ENST00000568691 SNCAIPQ9Y6H5 919 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms