RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 IFIT5Q13325 482 aaKnown RBP20.07■□□□□ 0.8
HERPUD1-215ENST00000568676 SUPT20HL1Q3ZLR7 823 aa20.07■□□□□ 0.8
HERPUD1-215ENST00000568676 ZNF804AQ7Z570 1209 aa20.07■□□□□ 0.8
HERPUD1-215ENST00000568676 SLC10A4Q96EP9 437 aa20.07■□□□□ 0.8
HERPUD1-215ENST00000568676 IL1R1P14778 569 aa20.06■□□□□ 0.8
HERPUD1-215ENST00000568676 PRKG1Q13976 671 aa20.06■□□□□ 0.8
HERPUD1-215ENST00000568676 IRS2Q9Y4H2 1338 aa20.05■□□□□ 0.8
HERPUD1-215ENST00000568676 CACNA1FO60840 1977 aa20.05■□□□□ 0.8
HERPUD1-215ENST00000568676 INTS3Q68E01 1043 aaKnown RBP20.04■□□□□ 0.8
HERPUD1-215ENST00000568676 OTUD7BQ6GQQ9 843 aa20.04■□□□□ 0.8
HERPUD1-215ENST00000568676 IFNL1Q8IU54 200 aa20.04■□□□□ 0.8
HERPUD1-215ENST00000568676 SPDYE2BA6NHP3 402 aa20.03■□□□□ 0.8
HERPUD1-215ENST00000568676 SPDYE6P0CI01 402 aa20.03■□□□□ 0.8
HERPUD1-215ENST00000568676 IREB2P48200 963 aaKnown RBP20.03■□□□□ 0.8
HERPUD1-215ENST00000568676 CERS5Q8N5B7 392 aa20.03■□□□□ 0.8
HERPUD1-215ENST00000568676 ECM29Q5VYK3 1845 aa20.03■□□□□ 0.8
HERPUD1-215ENST00000568676 LAMB1P07942 1786 aa20.03■□□□□ 0.8
HERPUD1-215ENST00000568676 TNFAIP1Q13829 316 aa20.02■□□□□ 0.8
HERPUD1-215ENST00000568676 CFAP100Q494V2 611 aa20.02■□□□□ 0.8
HERPUD1-215ENST00000568676 GCC1Q96CN9 775 aa20.02■□□□□ 0.8
HERPUD1-215ENST00000568676 WNK4Q96J92 1243 aa20.02■□□□□ 0.8
HERPUD1-215ENST00000568676 TAF5LO75529 589 aa20.01■□□□□ 0.79
HERPUD1-215ENST00000568676 FOXO4P98177 505 aa20.01■□□□□ 0.79
HERPUD1-215ENST00000568676 ERO1AQ96HE7 468 aa20.01■□□□□ 0.79
HERPUD1-215ENST00000568676 FANCIQ9NVI1 1328 aa20.01■□□□□ 0.79
HERPUD1-215ENST00000568676 SSC5DA1L4H1 1573 aa20■□□□□ 0.79
HERPUD1-215ENST00000568676 VAMP4O75379 141 aa20■□□□□ 0.79
HERPUD1-215ENST00000568676 CCDC57Q2TAC2 916 aa20■□□□□ 0.79
HERPUD1-215ENST00000568676 WDR63Q8IWG1 891 aa20■□□□□ 0.79
HERPUD1-215ENST00000568676 ANKRD13AQ8IZ07 590 aa20■□□□□ 0.79
HERPUD1-215ENST00000568676 R3HDMLQ9H3Y0 253 aa20■□□□□ 0.79
HERPUD1-215ENST00000568676 CHMP3Q9Y3E7 222 aa20■□□□□ 0.79
HERPUD1-215ENST00000568676 TRIM17Q9Y577 477 aa20■□□□□ 0.79
HERPUD1-215ENST00000568676 BEND3Q5T5X7 828 aa19.99■□□□□ 0.79
HERPUD1-215ENST00000568676 LDHAL6AQ6ZMR3 332 aa19.99■□□□□ 0.79
HERPUD1-215ENST00000568676 HELBQ8NG08 1087 aaPredicted RBP19.99■□□□□ 0.79
HERPUD1-215ENST00000568676 PRMT6Q96LA8 375 aaPredicted RBP19.99■□□□□ 0.79
HERPUD1-215ENST00000568676 FAM205AQ6ZU69 1335 aa19.99■□□□□ 0.79
HERPUD1-215ENST00000568676 CLRN2A0PK11 232 aa19.98■□□□□ 0.79
HERPUD1-215ENST00000568676 F8W031 263 aaPredicted RBP19.98■□□□□ 0.79
HERPUD1-215ENST00000568676 TAF7LQ5H9L4 462 aa19.98■□□□□ 0.79
HERPUD1-215ENST00000568676 OTOP1Q7RTM1 612 aa19.98■□□□□ 0.79
HERPUD1-215ENST00000568676 CLMNQ96JQ2 1002 aa19.98■□□□□ 0.79
HERPUD1-215ENST00000568676 VEZTQ9HBM0 779 aa19.98■□□□□ 0.79
HERPUD1-215ENST00000568676 TESPA1A2RU30 521 aaPredicted RBP19.97■□□□□ 0.79
HERPUD1-215ENST00000568676 SNAP23O00161 211 aa19.97■□□□□ 0.79
HERPUD1-215ENST00000568676 IGF2BP3O00425 579 aaKnown RBP eCLIP19.97■□□□□ 0.79
HERPUD1-215ENST00000568676 RBM5P52756 815 aaKnown RBP eCLIP19.97■□□□□ 0.79
HERPUD1-215ENST00000568676 RASA3Q14644 834 aa19.97■□□□□ 0.79
HERPUD1-215ENST00000568676 NBPF12Q5TAG4 269 aaPredicted RBP19.97■□□□□ 0.79
HERPUD1-215ENST00000568676 LMBR1LQ6UX01 489 aa19.97■□□□□ 0.79
HERPUD1-215ENST00000568676 CNNM1Q9NRU3 951 aa19.97■□□□□ 0.79
HERPUD1-215ENST00000568676 SERPINA10Q9UK55 444 aa19.97■□□□□ 0.79
HERPUD1-215ENST00000568676 FZD1Q9UP38 647 aa19.97■□□□□ 0.79
HERPUD1-215ENST00000568676 A0A1B0GUL6 1792 aa19.97■□□□□ 0.79
HERPUD1-215ENST00000568676 GRM8O00222 908 aa19.96■□□□□ 0.79
HERPUD1-215ENST00000568676 USP2O75604 605 aaPredicted RBP19.96■□□□□ 0.79
HERPUD1-215ENST00000568676 UBE4AQ14139 1066 aa19.96■□□□□ 0.79
HERPUD1-215ENST00000568676 ARHGEF6Q15052 776 aa19.95■□□□□ 0.78
HERPUD1-215ENST00000568676 SPDYE2Q495Y8 402 aa19.95■□□□□ 0.78
HERPUD1-215ENST00000568676 TDRD7Q8NHU6 1098 aaKnown RBP19.95■□□□□ 0.78
HERPUD1-215ENST00000568676 PTPN22Q9Y2R2 807 aa19.95■□□□□ 0.78
HERPUD1-215ENST00000568676 PCDHAC2Q9Y5I4 1007 aa19.95■□□□□ 0.78
HERPUD1-215ENST00000568676 ALDH1L1O75891 902 aa19.94■□□□□ 0.78
HERPUD1-215ENST00000568676 EXOSC9Q06265 439 aaKnown RBP19.94■□□□□ 0.78
HERPUD1-215ENST00000568676 CRHR2Q13324 411 aa19.94■□□□□ 0.78
HERPUD1-215ENST00000568676 MFSD14BQ5SR56 506 aa19.94■□□□□ 0.78
HERPUD1-215ENST00000568676 C9orf78Q9NZ63 289 aaPredicted RBP19.94■□□□□ 0.78
HERPUD1-215ENST00000568676 F6X3S4 739 aa19.93■□□□□ 0.78
HERPUD1-215ENST00000568676 HIBADHP31937 336 aaKnown RBP19.93■□□□□ 0.78
HERPUD1-215ENST00000568676 TNNI2P48788 182 aa19.93■□□□□ 0.78
HERPUD1-215ENST00000568676 SP3Q02447 781 aa19.93■□□□□ 0.78
HERPUD1-215ENST00000568676 CCDC184Q52MB2 194 aa19.93■□□□□ 0.78
HERPUD1-215ENST00000568676 EFCC1Q9HA90 598 aa19.93■□□□□ 0.78
HERPUD1-215ENST00000568676 TTF2Q9UNY4 1162 aaKnown RBP19.93■□□□□ 0.78
HERPUD1-215ENST00000568676 PLIN1O60240 522 aa19.92■□□□□ 0.78
HERPUD1-215ENST00000568676 ARMC5Q96C12 935 aa19.92■□□□□ 0.78
HERPUD1-215ENST00000568676 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.92■□□□□ 0.78
HERPUD1-215ENST00000568676 ZNF70Q9UC06 446 aaPredicted RBP19.92■□□□□ 0.78
HERPUD1-215ENST00000568676 GJA5P36382 358 aa19.91■□□□□ 0.78
HERPUD1-215ENST00000568676 EPHA10Q5JZY3 1008 aa19.91■□□□□ 0.78
HERPUD1-215ENST00000568676 OPTNQ96CV9 577 aa19.91■□□□□ 0.78
HERPUD1-215ENST00000568676 ZNF594Q96JF6 807 aaPredicted RBP19.91■□□□□ 0.78
HERPUD1-215ENST00000568676 RBBP6Q7Z6E9 1792 aaKnown RBP19.9■□□□□ 0.78
HERPUD1-215ENST00000568676 WDHD1O75717 1129 aaPredicted RBP19.9■□□□□ 0.78
HERPUD1-215ENST00000568676 GTF2A2P52657 109 aa19.9■□□□□ 0.78
HERPUD1-215ENST00000568676 HDLBPQ00341 1268 aaKnown RBP19.9■□□□□ 0.78
HERPUD1-215ENST00000568676 DZIP1LQ8IYY4 767 aaKnown RBP19.9■□□□□ 0.78
HERPUD1-215ENST00000568676 CD99L2Q8TCZ2 262 aa19.9■□□□□ 0.78
HERPUD1-215ENST00000568676 FAM84BQ96KN1 310 aaPredicted RBP19.9■□□□□ 0.78
HERPUD1-215ENST00000568676 PTPN18Q99952 460 aa19.9■□□□□ 0.78
HERPUD1-215ENST00000568676 SRCIN1Q9C0H9 1055 aa19.9■□□□□ 0.78
HERPUD1-215ENST00000568676 JAG2Q9Y219 1238 aa19.9■□□□□ 0.78
HERPUD1-215ENST00000568676 MROH5Q6ZUA9 1318 aa19.9■□□□□ 0.78
HERPUD1-215ENST00000568676 TBC1D22AQ8WUA7 517 aa19.89■□□□□ 0.77
HERPUD1-215ENST00000568676 ARAP2Q8WZ64 1704 aa19.89■□□□□ 0.77
HERPUD1-215ENST00000568676 MS4A4AQ96JQ5 239 aa19.89■□□□□ 0.77
HERPUD1-215ENST00000568676 TDRD3Q9H7E2 651 aaKnown RBP19.89■□□□□ 0.77
HERPUD1-215ENST00000568676 ELP3Q9H9T3 547 aa19.89■□□□□ 0.77
HERPUD1-215ENST00000568676 ZFYVE28Q9HCC9 887 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms