RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 ADD1P35611 737 aaKnown RBP11.34□□□□□ -0.59
TCF4-240ENST00000568673 ADD2P35612 726 aa11.34□□□□□ -0.59
TCF4-240ENST00000568673 HAND2P61296 217 aa11.34□□□□□ -0.59
TCF4-240ENST00000568673 CAMK4Q16566 473 aa11.34□□□□□ -0.59
TCF4-240ENST00000568673 AKAP11Q9UKA4 1901 aa11.34□□□□□ -0.59
TCF4-240ENST00000568673 EIF5P55010 431 aaKnown RBP11.34□□□□□ -0.59
TCF4-240ENST00000568673 SLC9C2Q5TAH2 1124 aa11.34□□□□□ -0.59
TCF4-240ENST00000568673 ATL3Q6DD88 541 aa11.34□□□□□ -0.59
TCF4-240ENST00000568673 RBM43Q6ZSC3 357 aaKnown RBP11.34□□□□□ -0.59
TCF4-240ENST00000568673 MB21D2Q8IYB1 491 aaPredicted RBP11.34□□□□□ -0.59
TCF4-240ENST00000568673 TNMDQ9H2S6 317 aa11.34□□□□□ -0.59
TCF4-240ENST00000568673 NAP1L2Q9ULW6 460 aaPredicted RBP11.34□□□□□ -0.59
TCF4-240ENST00000568673 NWD2Q9ULI1 1742 aa11.34□□□□□ -0.59
TCF4-240ENST00000568673 UBE3CQ15386 1083 aa11.33□□□□□ -0.6
TCF4-240ENST00000568673 CCDC102BQ68D86 513 aa11.33□□□□□ -0.6
TCF4-240ENST00000568673 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.33□□□□□ -0.6
TCF4-240ENST00000568673 NCOA7Q8NI08 942 aa11.33□□□□□ -0.6
TCF4-240ENST00000568673 RCOR1Q9UKL0 485 aa11.33□□□□□ -0.6
TCF4-240ENST00000568673 MROH5Q6ZUA9 1318 aa11.33□□□□□ -0.6
TCF4-240ENST00000568673 PRC1O43663 620 aa11.33□□□□□ -0.6
TCF4-240ENST00000568673 NR1I2O75469 434 aa11.33□□□□□ -0.6
TCF4-240ENST00000568673 UQCRFS1P1P0C7P4 283 aa11.33□□□□□ -0.6
TCF4-240ENST00000568673 ARID4AP29374 1257 aaPredicted RBP11.33□□□□□ -0.6
TCF4-240ENST00000568673 FAM200AQ8TCP9 573 aa11.33□□□□□ -0.6
TCF4-240ENST00000568673 BICD2Q8TD16 824 aa11.33□□□□□ -0.6
TCF4-240ENST00000568673 LPIN2Q92539 896 aa11.33□□□□□ -0.6
TCF4-240ENST00000568673 CLSTN2Q9H4D0 955 aa11.33□□□□□ -0.6
TCF4-240ENST00000568673 THRAP3Q9Y2W1 955 aaKnown RBP11.33□□□□□ -0.6
TCF4-240ENST00000568673 COL22A1Q8NFW1 1626 aaPredicted RBP11.33□□□□□ -0.6
TCF4-240ENST00000568673 MYH7P12883 1935 aa11.32□□□□□ -0.6
TCF4-240ENST00000568673 WDR19Q8NEZ3 1342 aa11.32□□□□□ -0.6
TCF4-240ENST00000568673 COL16A1Q07092 1604 aaPredicted RBP11.32□□□□□ -0.6
TCF4-240ENST00000568673 DHX16O60231 1041 aaKnown RBP11.32□□□□□ -0.6
TCF4-240ENST00000568673 FDPSP14324 419 aaKnown RBP11.32□□□□□ -0.6
TCF4-240ENST00000568673 FGFR2P21802 821 aa11.32□□□□□ -0.6
TCF4-240ENST00000568673 TYRO3Q06418 890 aa11.32□□□□□ -0.6
TCF4-240ENST00000568673 PUM3Q15397 648 aaKnown RBP11.32□□□□□ -0.6
TCF4-240ENST00000568673 INTS5Q6P9B9 1019 aaKnown RBP11.32□□□□□ -0.6
TCF4-240ENST00000568673 RALYLQ86SE5 291 aaKnown RBP11.32□□□□□ -0.6
TCF4-240ENST00000568673 GPHNQ9NQX3 736 aaPredicted RBP11.32□□□□□ -0.6
TCF4-240ENST00000568673 MRVI1Q9Y6F6 885 aa11.32□□□□□ -0.6
TCF4-240ENST00000568673 CARMIL3Q8ND23 1372 aa11.32□□□□□ -0.6
TCF4-240ENST00000568673 ATRNO75882 1429 aa11.32□□□□□ -0.6
TCF4-240ENST00000568673 PHKA1P46020 1223 aa11.32□□□□□ -0.6
TCF4-240ENST00000568673 DDB1Q16531 1140 aa11.32□□□□□ -0.6
TCF4-240ENST00000568673 CKAP2LQ8IYA6 745 aa11.32□□□□□ -0.6
TCF4-240ENST00000568673 ZNF396Q96N95 335 aaPredicted RBP11.32□□□□□ -0.6
TCF4-240ENST00000568673 PIH1D3Q9NQM4 214 aaKnown RBP11.32□□□□□ -0.6
TCF4-240ENST00000568673 ROBO1Q9Y6N7 1651 aa11.32□□□□□ -0.6
TCF4-240ENST00000568673 IDH1O75874 414 aaKnown RBP11.31□□□□□ -0.6
TCF4-240ENST00000568673 ANTXR2P58335 489 aa11.31□□□□□ -0.6
TCF4-240ENST00000568673 CEBPZQ03701 1054 aaKnown RBP11.31□□□□□ -0.6
TCF4-240ENST00000568673 SUSD4Q5VX71 490 aa11.31□□□□□ -0.6
TCF4-240ENST00000568673 CCDC87Q9NVE4 849 aa11.31□□□□□ -0.6
TCF4-240ENST00000568673 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.31□□□□□ -0.6
TCF4-240ENST00000568673 AHDC1Q5TGY3 1603 aaPredicted RBP11.31□□□□□ -0.6
TCF4-240ENST00000568673 SPATA31A1Q5TZJ5 1347 aa11.31□□□□□ -0.6
TCF4-240ENST00000568673 KLF18A0A0U1RQI7 1052 aa11.31□□□□□ -0.6
TCF4-240ENST00000568673 ATP6V1AP38606 617 aa11.31□□□□□ -0.6
TCF4-240ENST00000568673 TRDNQ13061 729 aa11.31□□□□□ -0.6
TCF4-240ENST00000568673 USP28Q96RU2 1077 aa11.31□□□□□ -0.6
TCF4-240ENST00000568673 HPS5Q9UPZ3 1129 aa11.31□□□□□ -0.6
TCF4-240ENST00000568673 ZNF532Q9HCE3 1301 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 TCRBV5S4A2TA0A5A2 114 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 AP5Z1O43299 807 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 PPFIA3O75145 1194 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 PDE6AP16499 860 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 CRKLP46109 303 aaKnown RBP11.3□□□□□ -0.6
TCF4-240ENST00000568673 FOSBP53539 338 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 HELBQ8NG08 1087 aaPredicted RBP11.3□□□□□ -0.6
TCF4-240ENST00000568673 UTP14AQ9BVJ6 771 aaKnown RBP11.3□□□□□ -0.6
TCF4-240ENST00000568673 NBPF3Q9H094 633 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 SLIT2O94813 1529 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 DOT1LQ8TEK3 1739 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 WNK3Q9BYP7 1800 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 LOC102724428A0A0B4J2F2 783 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 GOLGA8BA8MQT2 603 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 TERF1P54274 439 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 SIK1P57059 783 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 GUCY1B3Q02153 619 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 PARP10Q53GL7 1025 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 ILDR1Q86SU0 546 aaPredicted RBP11.3□□□□□ -0.6
TCF4-240ENST00000568673 MPHOSPH8Q99549 860 aa11.3□□□□□ -0.6
TCF4-240ENST00000568673 CAMTA2O94983 1202 aa11.29□□□□□ -0.6
TCF4-240ENST00000568673 APPP05067 770 aa11.29□□□□□ -0.6
TCF4-240ENST00000568673 SLC5A1P13866 664 aa11.29□□□□□ -0.6
TCF4-240ENST00000568673 KIAA2012Q0VF49 1180 aa11.29□□□□□ -0.6
TCF4-240ENST00000568673 ANO6Q4KMQ2 910 aa11.29□□□□□ -0.6
TCF4-240ENST00000568673 SASS6Q6UVJ0 657 aa11.29□□□□□ -0.6
TCF4-240ENST00000568673 SPATA5Q8NB90 893 aa11.29□□□□□ -0.6
TCF4-240ENST00000568673 STRBPQ96SI9 672 aaKnown RBP11.29□□□□□ -0.6
TCF4-240ENST00000568673 FTOQ9C0B1 505 aaKnown RBP eCLIP11.29□□□□□ -0.6
TCF4-240ENST00000568673 WWC3Q9ULE0 1092 aa11.29□□□□□ -0.6
TCF4-240ENST00000568673 LRP5O75197 1615 aa11.29□□□□□ -0.6
TCF4-240ENST00000568673 MYH15Q9Y2K3 1946 aa11.29□□□□□ -0.6
TCF4-240ENST00000568673 CPLX1O14810 134 aa11.28□□□□□ -0.6
TCF4-240ENST00000568673 CTAGE5O15320 804 aa11.28□□□□□ -0.6
TCF4-240ENST00000568673 ADAMTS2O95450 1211 aa11.28□□□□□ -0.6
TCF4-240ENST00000568673 CAVIN2O95810 425 aa11.28□□□□□ -0.6
TCF4-240ENST00000568673 ALX1Q15699 326 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms