RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 KCNB2Q92953 911 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 SMTNL1A8MU46 457 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 KIF28PB7ZC32 967 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 RNF113AO15541 343 aaKnown RBP10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 ZSCAN20P17040 1043 aaPredicted RBP10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 IMMTQ16891 758 aaKnown RBP10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 ZNF827Q17R98 1081 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 SLC4A8Q2Y0W8 1093 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 IL17RAQ96F46 866 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 EPC1Q9H2F5 836 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 SENP2Q9HC62 589 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 FMN2Q9NZ56 1722 aa10.43□□□□□ -0.74
HDGFL3-206ENST00000568294 hCG_1642624A0A1W2PR95 340 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 COBLO75128 1261 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 ILDR1Q86SU0 546 aaPredicted RBP10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 DHX40Q8IX18 779 aaKnown RBP10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 PRDM11Q9NQV5 511 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 CNNM1Q9NRU3 951 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 CARMIL3Q8ND23 1372 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 B4E1Z4 1266 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 SPTLC2O15270 562 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 FGAP02671 866 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 SFPQP23246 707 aaKnown RBP eCLIP10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 TRDNQ13061 729 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 PNOCQ13519 176 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 XAGE2Q96GT9 111 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 CGNQ9P2M7 1197 aaKnown RBP10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 ZNF213O14771 459 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 FDPSP14324 419 aaKnown RBP10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 SNW1Q13573 536 aaKnown RBP10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 ERCC6LQ2NKX8 1250 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 ATG9AQ7Z3C6 839 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 NKX2-3Q8TAU0 364 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 NUP133Q8WUM0 1156 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 DNAI1Q9UI46 699 aa10.42□□□□□ -0.74
HDGFL3-206ENST00000568294 EYA2O00167 538 aa10.41□□□□□ -0.74
HDGFL3-206ENST00000568294 TRMT44Q8IYL2 757 aaKnown RBP10.41□□□□□ -0.74
HDGFL3-206ENST00000568294 NAT10Q9H0A0 1025 aaKnown RBP10.41□□□□□ -0.74
HDGFL3-206ENST00000568294 SLC9C2Q5TAH2 1124 aa10.41□□□□□ -0.74
HDGFL3-206ENST00000568294 KLHL10Q6JEL2 608 aa10.41□□□□□ -0.74
HDGFL3-206ENST00000568294 ALG1Q9BT22 464 aa10.41□□□□□ -0.74
HDGFL3-206ENST00000568294 MTMR7Q9Y216 660 aa10.41□□□□□ -0.74
HDGFL3-206ENST00000568294 GPAA1O43292 621 aa10.4□□□□□ -0.74
HDGFL3-206ENST00000568294 URI1O94763 535 aaPredicted RBP10.4□□□□□ -0.74
HDGFL3-206ENST00000568294 ZNF202O95125 648 aa10.4□□□□□ -0.74
HDGFL3-206ENST00000568294 FOXO4P98177 505 aa10.4□□□□□ -0.74
HDGFL3-206ENST00000568294 GRAMD1CQ8IYS0 662 aa10.4□□□□□ -0.74
HDGFL3-206ENST00000568294 PLBD2Q8NHP8 589 aa10.4□□□□□ -0.74
HDGFL3-206ENST00000568294 POLR3GO15318 223 aaPredicted RBP10.4□□□□□ -0.74
HDGFL3-206ENST00000568294 FOXN1O15353 648 aa10.4□□□□□ -0.74
HDGFL3-206ENST00000568294 PFKFB1P16118 471 aa10.4□□□□□ -0.74
HDGFL3-206ENST00000568294 ZMYM1Q5SVZ6 1142 aa10.4□□□□□ -0.74
HDGFL3-206ENST00000568294 CPLX3Q8WVH0 158 aa10.4□□□□□ -0.74
HDGFL3-206ENST00000568294 ZFP91Q96JP5 570 aaPredicted RBP10.4□□□□□ -0.74
HDGFL3-206ENST00000568294 SLC26A6Q9BXS9 759 aa10.4□□□□□ -0.74
HDGFL3-206ENST00000568294 CDK11BP21127 795 aaKnown RBP10.4□□□□□ -0.75
HDGFL3-206ENST00000568294 IL15P40933 162 aaPredicted RBP10.4□□□□□ -0.75
HDGFL3-206ENST00000568294 LDHAL6AQ6ZMR3 332 aa10.4□□□□□ -0.75
HDGFL3-206ENST00000568294 KIF18AQ8NI77 898 aa10.4□□□□□ -0.75
HDGFL3-206ENST00000568294 RCOR1Q9UKL0 485 aa10.4□□□□□ -0.75
HDGFL3-206ENST00000568294 KDM6AO15550 1401 aaPredicted RBP10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 RGPD2P0DJD1 1756 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 HMGB1P09429 215 aaKnown RBP10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 GTF2F1P35269 517 aaKnown RBP eCLIP10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 METAP2P50579 478 aaKnown RBP eCLIP10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 CTDSPL2Q05D32 466 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 MYSM1Q5VVJ2 828 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 USPL1Q5W0Q7 1092 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 DPF2Q92785 391 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 DCAF5Q96JK2 942 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 KCNJ14Q9UNX9 436 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 NALCNQ8IZF0 1738 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 TOPAZ1Q8N9V7 1692 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 TMEM232C9JQI7 657 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 SYKP43405 635 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 EVA1CP58658 441 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 TPM4P67936 248 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 DMTNQ08495 405 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 NAA16Q6N069 864 aaPredicted RBP10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 FBXO38Q6PIJ6 1188 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 SMARCC2Q8TAQ2 1214 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 UTP14AQ9BVJ6 771 aaKnown RBP10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 ANKARQ7Z5J8 1434 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 CCZ1BP86790 482 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 CCZ1P86791 482 aaPredicted RBP10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 IFIT5Q13325 482 aaKnown RBP10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 KMT5BQ4FZB7 885 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 MIGA1Q8NAN2 632 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 LINC00301Q8NCQ3 95 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 KIAA1468Q9P260 1216 aa10.39□□□□□ -0.75
HDGFL3-206ENST00000568294 MROH7-TTC4A0A0A0MT08 1334 aa10.38□□□□□ -0.75
HDGFL3-206ENST00000568294 WDHD1O75717 1129 aaPredicted RBP10.38□□□□□ -0.75
HDGFL3-206ENST00000568294 TRIM29Q14134 588 aa10.38□□□□□ -0.75
HDGFL3-206ENST00000568294 TBC1D2BQ9UPU7 963 aa10.38□□□□□ -0.75
HDGFL3-206ENST00000568294 UTYO14607 1347 aa10.38□□□□□ -0.75
HDGFL3-206ENST00000568294 CTAGE5O15320 804 aa10.38□□□□□ -0.75
HDGFL3-206ENST00000568294 NRDCO43847 1150 aa10.38□□□□□ -0.75
HDGFL3-206ENST00000568294 STX17P56962 302 aa10.38□□□□□ -0.75
HDGFL3-206ENST00000568294 UBASH3AP57075 661 aa10.38□□□□□ -0.75
HDGFL3-206ENST00000568294 KARSQ15046 597 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms