RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 ZNF594Q96JF6 807 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-221ENST00000567935 NYXQ9GZU5 481 aa17.62■□□□□ 0.41
COMMD4-221ENST00000567935 GREM2Q9H772 168 aa17.62■□□□□ 0.41
COMMD4-221ENST00000567935 RIPOR2Q9Y4F9 1068 aa17.62■□□□□ 0.41
COMMD4-221ENST00000567935 A0A1B0GUL7 405 aa17.61■□□□□ 0.41
COMMD4-221ENST00000567935 SRGNP10124 158 aa17.61■□□□□ 0.41
COMMD4-221ENST00000567935 LRRFIP1Q32MZ4 808 aaKnown RBP17.61■□□□□ 0.41
COMMD4-221ENST00000567935 CCDC93Q567U6 631 aa17.61■□□□□ 0.41
COMMD4-221ENST00000567935 LDHAL6AQ6ZMR3 332 aa17.61■□□□□ 0.41
COMMD4-221ENST00000567935 FSD1Q9BTV5 496 aa17.61■□□□□ 0.41
COMMD4-221ENST00000567935 DDX60Q8IY21 1712 aaKnown RBP17.61■□□□□ 0.41
COMMD4-221ENST00000567935 K7ELQ4 463 aaPredicted RBP17.6■□□□□ 0.41
COMMD4-221ENST00000567935 FZD9O00144 591 aa17.6■□□□□ 0.41
COMMD4-221ENST00000567935 MCM2P49736 904 aa17.6■□□□□ 0.41
COMMD4-221ENST00000567935 FKBP4Q02790 459 aaKnown RBP eCLIP17.6■□□□□ 0.41
COMMD4-221ENST00000567935 CCDC158Q5M9N0 1113 aa17.6■□□□□ 0.41
COMMD4-221ENST00000567935 OLFM4Q6UX06 510 aa17.6■□□□□ 0.41
COMMD4-221ENST00000567935 NEUROD6Q96NK8 337 aa17.6■□□□□ 0.41
COMMD4-221ENST00000567935 PUS3Q9BZE2 481 aaKnown RBP17.6■□□□□ 0.41
COMMD4-221ENST00000567935 CNNM1Q9NRU3 951 aa17.6■□□□□ 0.41
COMMD4-221ENST00000567935 MROH5Q6ZUA9 1318 aa17.6■□□□□ 0.41
COMMD4-221ENST00000567935 RIC1Q4ADV7 1423 aa17.6■□□□□ 0.41
COMMD4-221ENST00000567935 TRPM7Q96QT4 1865 aa17.6■□□□□ 0.41
COMMD4-221ENST00000567935 HSPA4P34932 840 aa17.59■□□□□ 0.41
COMMD4-221ENST00000567935 METTL24Q5JXM2 366 aa17.59■□□□□ 0.41
COMMD4-221ENST00000567935 CIAPIN1Q6FI81 312 aa17.59■□□□□ 0.41
COMMD4-221ENST00000567935 CWC27Q6UX04 472 aaKnown RBP17.59■□□□□ 0.41
COMMD4-221ENST00000567935 SYNE4Q8N205 404 aa17.59■□□□□ 0.41
COMMD4-221ENST00000567935 MASTLQ96GX5 879 aa17.59■□□□□ 0.41
COMMD4-221ENST00000567935 ATP2B3Q16720 1220 aa17.58■□□□□ 0.4
COMMD4-221ENST00000567935 SLC10A5Q5PT55 438 aa17.58■□□□□ 0.4
COMMD4-221ENST00000567935 SAPCD2Q86UD0 394 aa17.58■□□□□ 0.4
COMMD4-221ENST00000567935 GPC2Q8N158 579 aa17.58■□□□□ 0.4
COMMD4-221ENST00000567935 ZNF512BQ96KM6 892 aaPredicted RBP17.58■□□□□ 0.4
COMMD4-221ENST00000567935 LSG1Q9H089 658 aaKnown RBP17.58■□□□□ 0.4
COMMD4-221ENST00000567935 TIMM10P62072 90 aa17.57■□□□□ 0.4
COMMD4-221ENST00000567935 SF3B3Q15393 1217 aaKnown RBP17.57■□□□□ 0.4
COMMD4-221ENST00000567935 GORABQ5T7V8 394 aa17.57■□□□□ 0.4
COMMD4-221ENST00000567935 CNBD1Q8NA66 436 aa17.57■□□□□ 0.4
COMMD4-221ENST00000567935 KBTBD3Q8NAB2 608 aa17.57■□□□□ 0.4
COMMD4-221ENST00000567935 CDC5LQ99459 802 aaKnown RBP17.57■□□□□ 0.4
COMMD4-221ENST00000567935 PDE8BO95263 885 aa17.56■□□□□ 0.4
COMMD4-221ENST00000567935 IFIT1P09914 478 aaKnown RBP17.56■□□□□ 0.4
COMMD4-221ENST00000567935 HCLS1P14317 486 aaPredicted RBP17.56■□□□□ 0.4
COMMD4-221ENST00000567935 IGHMBP2P38935 993 aaKnown RBP17.56■□□□□ 0.4
COMMD4-221ENST00000567935 EPS15P42566 896 aa17.56■□□□□ 0.4
COMMD4-221ENST00000567935 VGLL2Q8N8G2 317 aa17.56■□□□□ 0.4
COMMD4-221ENST00000567935 CCDC85AQ96PX6 553 aaPredicted RBP17.56■□□□□ 0.4
COMMD4-221ENST00000567935 ZIC5Q96T25 663 aa17.56■□□□□ 0.4
COMMD4-221ENST00000567935 SETDB2Q96T68 719 aa17.56■□□□□ 0.4
COMMD4-221ENST00000567935 MPHOSPH8Q99549 860 aa17.56■□□□□ 0.4
COMMD4-221ENST00000567935 CIZ1Q9ULV3 898 aaPredicted RBP17.56■□□□□ 0.4
COMMD4-221ENST00000567935 MED23Q9ULK4 1368 aa17.55■□□□□ 0.4
COMMD4-221ENST00000567935 CCDC171Q6TFL3 1326 aa17.55■□□□□ 0.4
COMMD4-221ENST00000567935 IARSP41252 1262 aaKnown RBP17.55■□□□□ 0.4
COMMD4-221ENST00000567935 NMIQ13287 307 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-221ENST00000567935 PUM3Q15397 648 aaKnown RBP17.55■□□□□ 0.4
COMMD4-221ENST00000567935 TTC39AQ5SRH9 613 aa17.55■□□□□ 0.4
COMMD4-221ENST00000567935 XAGE2Q96GT9 111 aa17.55■□□□□ 0.4
COMMD4-221ENST00000567935 ANTXR1Q9H6X2 564 aa17.55■□□□□ 0.4
COMMD4-221ENST00000567935 PAG1Q9NWQ8 432 aa17.55■□□□□ 0.4
COMMD4-221ENST00000567935 GJA3Q9Y6H8 435 aa17.55■□□□□ 0.4
COMMD4-221ENST00000567935 ARAP2Q8WZ64 1704 aa17.55■□□□□ 0.4
COMMD4-221ENST00000567935 SCNN1DP51172 638 aa17.54■□□□□ 0.4
COMMD4-221ENST00000567935 LPIN2Q92539 896 aa17.54■□□□□ 0.4
COMMD4-221ENST00000567935 KCNB2Q92953 911 aa17.54■□□□□ 0.4
COMMD4-221ENST00000567935 DNAJC2Q99543 621 aaKnown RBP17.54■□□□□ 0.4
COMMD4-221ENST00000567935 CHMP5Q9NZZ3 219 aa17.54■□□□□ 0.4
COMMD4-221ENST00000567935 COL4A5P29400 1685 aa17.54■□□□□ 0.4
COMMD4-221ENST00000567935 NPHP1O15259 732 aa17.53■□□□□ 0.4
COMMD4-221ENST00000567935 CELF2O95319 508 aaKnown RBP17.53■□□□□ 0.4
COMMD4-221ENST00000567935 ZFYP08048 801 aaPredicted RBP17.53■□□□□ 0.4
COMMD4-221ENST00000567935 UQCRFS1P1P0C7P4 283 aa17.53■□□□□ 0.4
COMMD4-221ENST00000567935 GTF2E1P29083 439 aaPredicted RBP17.53■□□□□ 0.4
COMMD4-221ENST00000567935 LMOD1P29536 600 aaPredicted RBP17.53■□□□□ 0.4
COMMD4-221ENST00000567935 ST5P78524 1137 aa17.53■□□□□ 0.4
COMMD4-221ENST00000567935 TPTE2Q6XPS3 522 aa17.53■□□□□ 0.4
COMMD4-221ENST00000567935 IL25Q9H293 177 aa17.53■□□□□ 0.4
COMMD4-221ENST00000567935 HELLSQ9NRZ9 838 aa17.53■□□□□ 0.4
COMMD4-221ENST00000567935 FAM177BA6PVY3 158 aa17.52■□□□□ 0.4
COMMD4-221ENST00000567935 HSP90AA1P07900 732 aaKnown RBP17.52■□□□□ 0.4
COMMD4-221ENST00000567935 SLC5A1P13866 664 aa17.52■□□□□ 0.4
COMMD4-221ENST00000567935 RNF20Q5VTR2 975 aa17.52■□□□□ 0.4
COMMD4-221ENST00000567935 MAP4K1Q92918 833 aa17.52■□□□□ 0.4
COMMD4-221ENST00000567935 ZKSCAN1P17029 563 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-221ENST00000567935 FGFR2P21802 821 aa17.51■□□□□ 0.39
COMMD4-221ENST00000567935 TTF1Q15361 905 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-221ENST00000567935 MCMDC2Q4G0Z9 681 aa17.51■□□□□ 0.39
COMMD4-221ENST00000567935 NBPF5PQ86XG9 351 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-221ENST00000567935 HHIPL1Q96JK4 782 aa17.51■□□□□ 0.39
COMMD4-221ENST00000567935 FAM227BQ96M60 508 aa17.51■□□□□ 0.39
COMMD4-221ENST00000567935 TM6SF1Q9BZW5 370 aa17.51■□□□□ 0.39
COMMD4-221ENST00000567935 HMG20BQ9P0W2 317 aa17.51■□□□□ 0.39
COMMD4-221ENST00000567935 A0A0D9SFI3 127 aa17.5■□□□□ 0.39
COMMD4-221ENST00000567935 GOLIM4O00461 696 aa17.5■□□□□ 0.39
COMMD4-221ENST00000567935 NEK4P51957 841 aa17.5■□□□□ 0.39
COMMD4-221ENST00000567935 HABP4Q5JVS0 413 aaKnown RBP17.5■□□□□ 0.39
COMMD4-221ENST00000567935 USP50Q70EL3 339 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-221ENST00000567935 ANKRD18AQ8IVF6 992 aa17.5■□□□□ 0.39
COMMD4-221ENST00000567935 RTKN2Q8IZC4 609 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms