RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 AIDAQ96BJ3 306 aa15.73■□□□□ 0.11
LINC00563-201ENST00000566370 ZNF396Q96N95 335 aaPredicted RBP15.73■□□□□ 0.11
LINC00563-201ENST00000566370 RBSNQ9H1K0 784 aa15.73■□□□□ 0.11
LINC00563-201ENST00000566370 GNL3LQ9NVN8 582 aaKnown RBP15.73■□□□□ 0.11
LINC00563-201ENST00000566370 ZMYM6O95789 1325 aa15.72■□□□□ 0.11
LINC00563-201ENST00000566370 GNAT2P19087 354 aa15.72■□□□□ 0.11
LINC00563-201ENST00000566370 APOBRQ0VD83 1088 aa15.72■□□□□ 0.11
LINC00563-201ENST00000566370 VPS72Q15906 364 aa15.72■□□□□ 0.11
LINC00563-201ENST00000566370 CPLX2Q6PUV4 134 aaKnown RBP15.72■□□□□ 0.11
LINC00563-201ENST00000566370 CHAMP1Q96JM3 812 aa15.72■□□□□ 0.11
LINC00563-201ENST00000566370 NSFL1CQ9UNZ2 370 aaKnown RBP15.72■□□□□ 0.11
LINC00563-201ENST00000566370 AKAP11Q9UKA4 1901 aa15.72■□□□□ 0.11
LINC00563-201ENST00000566370 DDX60Q8IY21 1712 aaKnown RBP15.71■□□□□ 0.11
LINC00563-201ENST00000566370 ESPNB1AK53 854 aa15.71■□□□□ 0.11
LINC00563-201ENST00000566370 APPP05067 770 aa15.71■□□□□ 0.11
LINC00563-201ENST00000566370 HCLS1P14317 486 aaPredicted RBP15.71■□□□□ 0.11
LINC00563-201ENST00000566370 FGFR2P21802 821 aa15.71■□□□□ 0.11
LINC00563-201ENST00000566370 SCRN1Q12765 414 aa15.71■□□□□ 0.11
LINC00563-201ENST00000566370 SCARF1Q14162 830 aa15.71■□□□□ 0.11
LINC00563-201ENST00000566370 SPATA5Q8NB90 893 aa15.71■□□□□ 0.11
LINC00563-201ENST00000566370 RGS22Q8NE09 1264 aa15.71■□□□□ 0.11
LINC00563-201ENST00000566370 NGLY1Q96IV0 654 aa15.71■□□□□ 0.11
LINC00563-201ENST00000566370 NACAP1Q9BZK3 213 aa15.71■□□□□ 0.11
LINC00563-201ENST00000566370 NYXQ9GZU5 481 aa15.71■□□□□ 0.11
LINC00563-201ENST00000566370 DDX19AQ9NUU7 478 aaKnown RBP15.71■□□□□ 0.11
LINC00563-201ENST00000566370 CNTNAP4Q9C0A0 1308 aa15.7■□□□□ 0.1
LINC00563-201ENST00000566370 PTPDC1A2A3K4 754 aa15.7■□□□□ 0.1
LINC00563-201ENST00000566370 FAM177BA6PVY3 158 aa15.7■□□□□ 0.1
LINC00563-201ENST00000566370 CPLX1O14810 134 aa15.7■□□□□ 0.1
LINC00563-201ENST00000566370 PRC1O43663 620 aa15.7■□□□□ 0.1
LINC00563-201ENST00000566370 CDKL5O76039 1030 aa15.7■□□□□ 0.1
LINC00563-201ENST00000566370 NTSR2O95665 410 aa15.7■□□□□ 0.1
LINC00563-201ENST00000566370 FGAP02671 866 aa15.7■□□□□ 0.1
LINC00563-201ENST00000566370 MSNP26038 577 aaKnown RBP15.7■□□□□ 0.1
LINC00563-201ENST00000566370 ITPK1Q13572 414 aa15.7■□□□□ 0.1
LINC00563-201ENST00000566370 FERMT3Q86UX7 667 aa15.7■□□□□ 0.1
LINC00563-201ENST00000566370 ZNF532Q9HCE3 1301 aa15.7■□□□□ 0.1
LINC00563-201ENST00000566370 CHGBP05060 677 aa15.69■□□□□ 0.1
LINC00563-201ENST00000566370 PDE6AP16499 860 aa15.69■□□□□ 0.1
LINC00563-201ENST00000566370 GTF2E1P29083 439 aaPredicted RBP15.69■□□□□ 0.1
LINC00563-201ENST00000566370 PHKA1P46020 1223 aa15.69■□□□□ 0.1
LINC00563-201ENST00000566370 EVCP57679 992 aa15.69■□□□□ 0.1
LINC00563-201ENST00000566370 ALX1Q15699 326 aa15.69■□□□□ 0.1
LINC00563-201ENST00000566370 ANKRD18AQ8IVF6 992 aa15.69■□□□□ 0.1
LINC00563-201ENST00000566370 NSUN7Q8NE18 718 aaKnown RBP15.69■□□□□ 0.1
LINC00563-201ENST00000566370 LRRC2Q9BYS8 371 aa15.69■□□□□ 0.1
LINC00563-201ENST00000566370 PUS7LQ9H0K6 701 aaKnown RBP15.69■□□□□ 0.1
LINC00563-201ENST00000566370 CNNM2Q9H8M5 875 aa15.69■□□□□ 0.1
LINC00563-201ENST00000566370 CCDC39Q9UFE4 941 aa15.69■□□□□ 0.1
LINC00563-201ENST00000566370 DOCK2Q92608 1830 aa15.69■□□□□ 0.1
LINC00563-201ENST00000566370 CCDC192P0DO97 292 aa15.68■□□□□ 0.1
LINC00563-201ENST00000566370 PDIA3P30101 505 aaKnown RBP15.68■□□□□ 0.1
LINC00563-201ENST00000566370 CLCN1P35523 988 aa15.68■□□□□ 0.1
LINC00563-201ENST00000566370 DDX11Q96FC9 970 aa15.68■□□□□ 0.1
LINC00563-201ENST00000566370 NUP62CLQ9H1M0 184 aa15.68■□□□□ 0.1
LINC00563-201ENST00000566370 CARMIL3Q8ND23 1372 aa15.68■□□□□ 0.1
LINC00563-201ENST00000566370 SCN7AQ01118 1682 aa15.68■□□□□ 0.1
LINC00563-201ENST00000566370 JAK2O60674 1132 aa15.68■□□□□ 0.1
LINC00563-201ENST00000566370 RESTQ13127 1097 aa15.68■□□□□ 0.1
LINC00563-201ENST00000566370 FAM98CQ17RN3 349 aaKnown RBP15.68■□□□□ 0.1
LINC00563-201ENST00000566370 RC3H1Q5TC82 1133 aaKnown RBP15.68■□□□□ 0.1
LINC00563-201ENST00000566370 MB21D2Q8IYB1 491 aaPredicted RBP15.68■□□□□ 0.1
LINC00563-201ENST00000566370 BICD2Q8TD16 824 aa15.68■□□□□ 0.1
LINC00563-201ENST00000566370 TMEM87BQ96K49 555 aa15.68■□□□□ 0.1
LINC00563-201ENST00000566370 PIH1D3Q9NQM4 214 aaKnown RBP15.68■□□□□ 0.1
LINC00563-201ENST00000566370 SPATA31A6Q5VVP1 1343 aa15.67■□□□□ 0.1
LINC00563-201ENST00000566370 KLF18A0A0U1RQI7 1052 aa15.67■□□□□ 0.1
LINC00563-201ENST00000566370 GOLGA8BA8MQT2 603 aa15.67■□□□□ 0.1
LINC00563-201ENST00000566370 HAND2P61296 217 aa15.67■□□□□ 0.1
LINC00563-201ENST00000566370 CCT2P78371 535 aaKnown RBP15.67■□□□□ 0.1
LINC00563-201ENST00000566370 MAP3K11Q16584 847 aa15.67■□□□□ 0.1
LINC00563-201ENST00000566370 SLFNL1Q499Z3 407 aa15.67■□□□□ 0.1
LINC00563-201ENST00000566370 CAVIN4Q5BKX8 364 aa15.67■□□□□ 0.1
LINC00563-201ENST00000566370 TTLL5Q6EMB2 1281 aa15.67■□□□□ 0.1
LINC00563-201ENST00000566370 PI16Q6UXB8 463 aa15.67■□□□□ 0.1
LINC00563-201ENST00000566370 ZSCAN30Q86W11 494 aa15.67■□□□□ 0.1
LINC00563-201ENST00000566370 HELBQ8NG08 1087 aaPredicted RBP15.67■□□□□ 0.1
LINC00563-201ENST00000566370 LEO1Q8WVC0 666 aaPredicted RBP15.67■□□□□ 0.1
LINC00563-201ENST00000566370 PDLIM2Q96JY6 352 aa15.67■□□□□ 0.1
LINC00563-201ENST00000566370 KRT23Q9C075 422 aa15.67■□□□□ 0.1
LINC00563-201ENST00000566370 NAPBQ9H115 298 aa15.67■□□□□ 0.1
LINC00563-201ENST00000566370 MYH15Q9Y2K3 1946 aa15.66■□□□□ 0.1
LINC00563-201ENST00000566370 PATL2C9JE40 543 aaKnown RBP15.66■□□□□ 0.1
LINC00563-201ENST00000566370 UBAP1LF5GYI3 381 aa15.66■□□□□ 0.1
LINC00563-201ENST00000566370 PTMAP06454 111 aaKnown RBP15.66■□□□□ 0.1
LINC00563-201ENST00000566370 UBE4AQ14139 1066 aa15.66■□□□□ 0.1
LINC00563-201ENST00000566370 SART3Q15020 963 aaKnown RBP15.66■□□□□ 0.1
LINC00563-201ENST00000566370 SYNE3Q6ZMZ3 975 aa15.66■□□□□ 0.1
LINC00563-201ENST00000566370 TTC6Q86TZ1 520 aa15.66■□□□□ 0.1
LINC00563-201ENST00000566370 C8orf37Q96NL8 207 aa15.66■□□□□ 0.1
LINC00563-201ENST00000566370 RNF41Q9H4P4 317 aaPredicted RBP15.66■□□□□ 0.1
LINC00563-201ENST00000566370 MYH14Q7Z406 1995 aaKnown RBP15.65■□□□□ 0.1
LINC00563-201ENST00000566370 ZPR1O75312 459 aa15.65■□□□□ 0.1
LINC00563-201ENST00000566370 CHRNDQ07001 517 aa15.65■□□□□ 0.1
LINC00563-201ENST00000566370 SF3B3Q15393 1217 aaKnown RBP15.65■□□□□ 0.1
LINC00563-201ENST00000566370 TMED8Q6PL24 325 aaPredicted RBP15.65■□□□□ 0.1
LINC00563-201ENST00000566370 MAGEB6Q8N7X4 407 aa15.65■□□□□ 0.1
LINC00563-201ENST00000566370 TNMDQ9H2S6 317 aa15.65■□□□□ 0.1
LINC00563-201ENST00000566370 LRP2BPQ9P2M1 347 aa15.65■□□□□ 0.1
LINC00563-201ENST00000566370 ANGEL1Q9UNK9 670 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms