RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 LLPHQ9BRT6 129 aaKnown RBP19.53■□□□□ 0.72
CCNF-204ENST00000564333 SCN7AQ01118 1682 aa19.52■□□□□ 0.72
CCNF-204ENST00000564333 UQCRFS1P1P0C7P4 283 aa19.52■□□□□ 0.72
CCNF-204ENST00000564333 ADD2P35612 726 aa19.52■□□□□ 0.72
CCNF-204ENST00000564333 PHKA1P46020 1223 aa19.52■□□□□ 0.72
CCNF-204ENST00000564333 CCDC102BQ68D86 513 aa19.52■□□□□ 0.72
CCNF-204ENST00000564333 SMARCC2Q8TAQ2 1214 aa19.52■□□□□ 0.72
CCNF-204ENST00000564333 LPIN2Q92539 896 aa19.52■□□□□ 0.72
CCNF-204ENST00000564333 SMARCC1Q92922 1105 aaPredicted RBP19.52■□□□□ 0.72
CCNF-204ENST00000564333 A0A1B0GUL6 1792 aa19.52■□□□□ 0.71
CCNF-204ENST00000564333 ZNF500O60304 480 aaPredicted RBP19.51■□□□□ 0.71
CCNF-204ENST00000564333 FGFR2P21802 821 aa19.51■□□□□ 0.71
CCNF-204ENST00000564333 PIH1D3Q9NQM4 214 aaKnown RBP19.51■□□□□ 0.71
CCNF-204ENST00000564333 CCDC39Q9UFE4 941 aa19.51■□□□□ 0.71
CCNF-204ENST00000564333 ELP1O95163 1332 aa19.51■□□□□ 0.71
CCNF-204ENST00000564333 HSP90AA2PQ14568 343 aaPredicted RBP19.51■□□□□ 0.71
CCNF-204ENST00000564333 FAM184AQ8NB25 1140 aa19.51■□□□□ 0.71
CCNF-204ENST00000564333 RTL9Q8NET4 1388 aa19.5■□□□□ 0.71
CCNF-204ENST00000564333 LETM1O95202 739 aaPredicted RBP19.5■□□□□ 0.71
CCNF-204ENST00000564333 NTSR2O95665 410 aa19.5■□□□□ 0.71
CCNF-204ENST00000564333 SLC5A1P13866 664 aa19.5■□□□□ 0.71
CCNF-204ENST00000564333 HAND2P61296 217 aa19.5■□□□□ 0.71
CCNF-204ENST00000564333 TTC6Q86TZ1 520 aa19.5■□□□□ 0.71
CCNF-204ENST00000564333 NSUN7Q8NE18 718 aaKnown RBP19.5■□□□□ 0.71
CCNF-204ENST00000564333 HELBQ8NG08 1087 aaPredicted RBP19.5■□□□□ 0.71
CCNF-204ENST00000564333 DDX11Q96FC9 970 aa19.5■□□□□ 0.71
CCNF-204ENST00000564333 NIP7Q9Y221 180 aaKnown RBP eCLIP19.5■□□□□ 0.71
CCNF-204ENST00000564333 FGAP02671 866 aa19.49■□□□□ 0.71
CCNF-204ENST00000564333 CCDC152Q4G0S7 254 aa19.49■□□□□ 0.71
CCNF-204ENST00000564333 FAM173BQ6P4H8 233 aa19.49■□□□□ 0.71
CCNF-204ENST00000564333 CHST3Q7LGC8 479 aa19.49■□□□□ 0.71
CCNF-204ENST00000564333 RNF214Q8ND24 703 aa19.49■□□□□ 0.71
CCNF-204ENST00000564333 PTPDC1A2A3K4 754 aa19.49■□□□□ 0.71
CCNF-204ENST00000564333 H3BQV1 296 aa19.49■□□□□ 0.71
CCNF-204ENST00000564333 IDH1O75874 414 aaKnown RBP19.49■□□□□ 0.71
CCNF-204ENST00000564333 HSPA1LP34931 641 aa19.49■□□□□ 0.71
CCNF-204ENST00000564333 HMGN5P82970 282 aaKnown RBP19.49■□□□□ 0.71
CCNF-204ENST00000564333 RESTQ13127 1097 aa19.49■□□□□ 0.71
CCNF-204ENST00000564333 SLC9C2Q5TAH2 1124 aa19.49■□□□□ 0.71
CCNF-204ENST00000564333 IFFO2Q5TF58 517 aa19.49■□□□□ 0.71
CCNF-204ENST00000564333 FBXO41Q8TF61 875 aa19.49■□□□□ 0.71
CCNF-204ENST00000564333 MPHOSPH8Q99549 860 aa19.49■□□□□ 0.71
CCNF-204ENST00000564333 KCNQ2O43526 872 aa19.48■□□□□ 0.71
CCNF-204ENST00000564333 UBE3CQ15386 1083 aa19.48■□□□□ 0.71
CCNF-204ENST00000564333 FBXL16Q8N461 479 aa19.48■□□□□ 0.71
CCNF-204ENST00000564333 ZNF274Q96GC6 653 aaPredicted RBP19.48■□□□□ 0.71
CCNF-204ENST00000564333 SEC31BQ9NQW1 1179 aa19.48■□□□□ 0.71
CCNF-204ENST00000564333 NAP1L2Q9ULW6 460 aaPredicted RBP19.48■□□□□ 0.71
CCNF-204ENST00000564333 ZNF652Q9Y2D9 606 aa19.48■□□□□ 0.71
CCNF-204ENST00000564333 CTDNEP1O95476 244 aa19.47■□□□□ 0.71
CCNF-204ENST00000564333 SCAND2PQ9GZW5 306 aaPredicted RBP19.47■□□□□ 0.71
CCNF-204ENST00000564333 KIF3AQ9Y496 699 aa19.47■□□□□ 0.71
CCNF-204ENST00000564333 CHD4Q14839 1912 aa19.47■□□□□ 0.71
CCNF-204ENST00000564333 PDE6AP16499 860 aa19.47■□□□□ 0.71
CCNF-204ENST00000564333 CCT2P78371 535 aaKnown RBP19.47■□□□□ 0.71
CCNF-204ENST00000564333 FAM98CQ17RN3 349 aaKnown RBP19.47■□□□□ 0.71
CCNF-204ENST00000564333 MB21D2Q8IYB1 491 aaPredicted RBP19.47■□□□□ 0.71
CCNF-204ENST00000564333 ZKSCAN5Q9Y2L8 839 aa19.47■□□□□ 0.71
CCNF-204ENST00000564333 COL4A1P02462 1669 aa19.47■□□□□ 0.71
CCNF-204ENST00000564333 ZNF532Q9HCE3 1301 aa19.46■□□□□ 0.71
CCNF-204ENST00000564333 SALL1Q9NSC2 1324 aa19.46■□□□□ 0.71
CCNF-204ENST00000564333 C4AP0C0L4 1744 aa19.46■□□□□ 0.71
CCNF-204ENST00000564333 C4BP0C0L5 1744 aa19.46■□□□□ 0.71
CCNF-204ENST00000564333 ZNF213O14771 459 aa19.46■□□□□ 0.71
CCNF-204ENST00000564333 PDIA3P30101 505 aaKnown RBP19.46■□□□□ 0.71
CCNF-204ENST00000564333 IGHMBP2P38935 993 aaKnown RBP19.46■□□□□ 0.71
CCNF-204ENST00000564333 WWC3Q9ULE0 1092 aa19.46■□□□□ 0.71
CCNF-204ENST00000564333 PRC1O43663 620 aa19.45■□□□□ 0.7
CCNF-204ENST00000564333 UVSSAQ2YD98 709 aa19.45■□□□□ 0.7
CCNF-204ENST00000564333 NAA16Q6N069 864 aaPredicted RBP19.45■□□□□ 0.7
CCNF-204ENST00000564333 RALYLQ86SE5 291 aaKnown RBP19.45■□□□□ 0.7
CCNF-204ENST00000564333 NCOA7Q8NI08 942 aa19.45■□□□□ 0.7
CCNF-204ENST00000564333 CHMP4CQ96CF2 233 aa19.45■□□□□ 0.7
CCNF-204ENST00000564333 SPATA32Q96LK8 384 aa19.45■□□□□ 0.7
CCNF-204ENST00000564333 ZSCAN16Q9H4T2 348 aaPredicted RBP19.45■□□□□ 0.7
CCNF-204ENST00000564333 NCOA5Q9HCD5 579 aaKnown RBP19.45■□□□□ 0.7
CCNF-204ENST00000564333 EVCP57679 992 aa19.45■□□□□ 0.7
CCNF-204ENST00000564333 SPATA5Q8NB90 893 aa19.45■□□□□ 0.7
CCNF-204ENST00000564333 LINC00116Q8NCU8 138 aa19.45■□□□□ 0.7
CCNF-204ENST00000564333 BTAF1O14981 1849 aa19.44■□□□□ 0.7
CCNF-204ENST00000564333 BCL9LQ86UU0 1499 aa19.44■□□□□ 0.7
CCNF-204ENST00000564333 TIAM2Q8IVF5 1701 aa19.44■□□□□ 0.7
CCNF-204ENST00000564333 TCRBV5S4A2TA0A5A2 114 aa19.44■□□□□ 0.7
CCNF-204ENST00000564333 RASGRF1Q13972 1273 aa19.44■□□□□ 0.7
CCNF-204ENST00000564333 LEO1Q8WVC0 666 aaPredicted RBP19.44■□□□□ 0.7
CCNF-204ENST00000564333 WDR19Q8NEZ3 1342 aa19.44■□□□□ 0.7
CCNF-204ENST00000564333 NHSQ6T4R5 1651 aa19.44■□□□□ 0.7
CCNF-204ENST00000564333 GPHNQ9NQX3 736 aaPredicted RBP19.43■□□□□ 0.7
CCNF-204ENST00000564333 CARMIL3Q8ND23 1372 aa19.43■□□□□ 0.7
CCNF-204ENST00000564333 SNAP23O00161 211 aa19.43■□□□□ 0.7
CCNF-204ENST00000564333 FOSBP53539 338 aa19.43■□□□□ 0.7
CCNF-204ENST00000564333 ANTXR2P58335 489 aa19.43■□□□□ 0.7
CCNF-204ENST00000564333 VPS72Q15906 364 aa19.43■□□□□ 0.7
CCNF-204ENST00000564333 NBPF3Q9H094 633 aa19.43■□□□□ 0.7
CCNF-204ENST00000564333 TFIP11Q9UBB9 837 aaKnown RBP19.43■□□□□ 0.7
CCNF-204ENST00000564333 COL24A1Q17RW2 1714 aa19.43■□□□□ 0.7
CCNF-204ENST00000564333 THSD7AQ9UPZ6 1657 aa19.42■□□□□ 0.7
CCNF-204ENST00000564333 C8orf37Q96NL8 207 aa19.42■□□□□ 0.7
CCNF-204ENST00000564333 CNTNAP4Q9C0A0 1308 aa19.41■□□□□ 0.7
CCNF-204ENST00000564333 GOLGA8BA8MQT2 603 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms