RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 TTBK2Q6IQ55 1244 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 CKAP2LQ8IYA6 745 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 NKD1Q969G9 470 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 NSUN5Q96P11 429 aaKnown RBP3.88□□□□□ -1.79
CHD9-209ENST00000564255 MUC3BQ9H195 1237 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 ZNF408Q9H9D4 720 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 DACH1Q9UI36 760 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 EFR3BQ9Y2G0 817 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 PAGE1O75459 146 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 SSBP05455 408 aaKnown RBP eCLIP3.88□□□□□ -1.79
CHD9-209ENST00000564255 ATP11AP98196 1134 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 PCSK7Q16549 785 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 SNAP47Q5SQN1 464 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 FAM196AQ6ZSG2 479 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 RAB44Q7Z6P3 723 aaPredicted RBP3.88□□□□□ -1.79
CHD9-209ENST00000564255 ADAM19Q9H013 955 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 ZSWIM4Q9H7M6 989 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 PHF24Q9UPV7 400 aa3.88□□□□□ -1.79
CHD9-209ENST00000564255 ST8SIA5O15466 376 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 ETFBP38117 255 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 FAM160A1Q05DH4 1040 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 NEUROD1Q13562 356 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 NFE2L2Q16236 605 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 SDE2Q6IQ49 451 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 GTPBP3Q969Y2 492 aaKnown RBP3.87□□□□□ -1.79
CHD9-209ENST00000564255 SPACA7Q96KW9 195 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 MDFIQ99750 246 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 SENP2Q9HC62 589 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 SIRPGQ9P1W8 387 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 J3QW42 95 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 SIN3BO75182 1162 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 NME2P22392 152 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 CTBSQ01459 385 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 RASIP1Q5U651 963 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 GOLM1Q8NBJ4 401 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 TNFRSF25Q93038 417 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 POP1Q99575 1024 aaKnown RBP3.87□□□□□ -1.79
CHD9-209ENST00000564255 AVENQ9NQS1 362 aaPredicted RBP3.87□□□□□ -1.79
CHD9-209ENST00000564255 DNAJB12Q9NXW2 375 aaKnown RBP3.87□□□□□ -1.79
CHD9-209ENST00000564255 SOX13Q9UN79 622 aa3.87□□□□□ -1.79
CHD9-209ENST00000564255 CDK11AQ9UQ88 783 aaPredicted RBP3.87□□□□□ -1.79
CHD9-209ENST00000564255 FAM221AA4D161 298 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 ZNF468Q5VIY5 522 aaPredicted RBP3.86□□□□□ -1.79
CHD9-209ENST00000564255 EGFLAMQ63HQ2 1017 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 SCARA3Q6AZY7 606 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 TRIM42Q8IWZ5 723 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 BSNDQ8WZ55 320 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 SHDQ96IW2 340 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 TRIM47Q96LD4 638 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 TMEM39AQ9NV64 488 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 PRKAG3Q9UGI9 489 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 PCDHB5Q9Y5E4 795 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 C2CD2LO14523 706 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 B3GALT4O96024 378 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 GHRHP01286 108 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 CRKP46108 304 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 MLLT1Q03111 559 aaPredicted RBP3.86□□□□□ -1.79
CHD9-209ENST00000564255 ADAMTSL4Q6UY14 1074 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 HFE2Q6ZVN8 426 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 ANKS3Q6ZW76 656 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 JAZF1Q86VZ6 243 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 NLGN1Q8N2Q7 840 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 NANOS1Q8WY41 292 aaKnown RBP3.86□□□□□ -1.79
CHD9-209ENST00000564255 UBP1Q9NZI7 540 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 CYP8B1Q9UNU6 501 aa3.86□□□□□ -1.79
CHD9-209ENST00000564255 F13A1P00488 732 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 PCDH1Q08174 1060 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 MPP2Q14168 576 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 LRP10Q7Z4F1 713 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 VN1R5Q7Z5H4 357 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 SYT9Q86SS6 491 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 ASAP3Q8TDY4 903 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 GATAD2BQ8WXI9 593 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 TTC9Q92623 222 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 MRFAP1L1Q96HT8 127 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 SRRTQ9BXP5 876 aaKnown RBP3.85□□□□□ -1.79
CHD9-209ENST00000564255 UBE2OQ9C0C9 1292 aaKnown RBP3.85□□□□□ -1.79
CHD9-209ENST00000564255 CLEC4MQ9H2X3 399 aaPredicted RBP3.85□□□□□ -1.79
CHD9-209ENST00000564255 FRRS1LQ9P0K9 344 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 GPN3Q9UHW5 284 aaPredicted RBP3.85□□□□□ -1.79
CHD9-209ENST00000564255 SAMM50Q9Y512 469 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 ADARB2-AS1A8MUL3 147 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 K7ELQ4 463 aaPredicted RBP3.85□□□□□ -1.79
CHD9-209ENST00000564255 CILPO75339 1184 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 SMNDC1O75940 238 aaKnown RBP eCLIP3.85□□□□□ -1.79
CHD9-209ENST00000564255 PPP2R3AQ06190 1150 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 RAB33AQ14088 237 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 ZNF423Q2M1K9 1284 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 BNC2Q6ZN30 1099 aaPredicted RBP3.85□□□□□ -1.79
CHD9-209ENST00000564255 OR6P1Q8NGX9 317 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 RBSNQ9H1K0 784 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 CACNA2D2Q9NY47 1150 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 KLF15Q9UIH9 416 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 SLC6A14Q9UN76 642 aa3.85□□□□□ -1.79
CHD9-209ENST00000564255 PPFIA3O75145 1194 aa3.84□□□□□ -1.79
CHD9-209ENST00000564255 NCLP19338 710 aaKnown RBP3.84□□□□□ -1.79
CHD9-209ENST00000564255 ARNTP27540 789 aa3.84□□□□□ -1.79
CHD9-209ENST00000564255 GIPRP48546 466 aa3.84□□□□□ -1.79
CHD9-209ENST00000564255 APOBRQ0VD83 1088 aa3.84□□□□□ -1.79
CHD9-209ENST00000564255 BMS1Q14692 1282 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms