RNA–Protein interactions for RNA: ENST00000564105.5

CTU2-204, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 1 (best)

Gene CTU2, Length 1,586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-204ENST00000564105 FRAT2O75474 233 aaPredicted RBP23.32■■□□□ 1.32
CTU2-204ENST00000564105 RASGRF1Q13972 1273 aa23.32■■□□□ 1.32
CTU2-204ENST00000564105 DCAF8Q5TAQ9 597 aa23.32■■□□□ 1.32
CTU2-204ENST00000564105 COA1Q9GZY4 146 aa23.32■■□□□ 1.32
CTU2-204ENST00000564105 VPS33BQ9H267 617 aa23.32■■□□□ 1.32
CTU2-204ENST00000564105 SNRKQ9NRH2 765 aa23.32■■□□□ 1.32
CTU2-204ENST00000564105 ZNF277Q9NRM2 450 aaPredicted RBP23.32■■□□□ 1.32
CTU2-204ENST00000564105 NDUFB9Q9Y6M9 179 aa23.32■■□□□ 1.32
CTU2-204ENST00000564105 TRIM6-TRIM34B2RNG4 842 aa23.31■■□□□ 1.32
CTU2-204ENST00000564105 SEMA3EO15041 775 aa23.31■■□□□ 1.32
CTU2-204ENST00000564105 DOK7Q18PE1 504 aa23.31■■□□□ 1.32
CTU2-204ENST00000564105 BMP2KLQ5H9B9 411 aa23.31■■□□□ 1.32
CTU2-204ENST00000564105 PI16Q6UXB8 463 aa23.31■■□□□ 1.32
CTU2-204ENST00000564105 TDRD7Q8NHU6 1098 aaKnown RBP23.31■■□□□ 1.32
CTU2-204ENST00000564105 HMG20BQ9P0W2 317 aa23.31■■□□□ 1.32
CTU2-204ENST00000564105 DENND2AQ9ULE3 1009 aa23.31■■□□□ 1.32
CTU2-204ENST00000564105 MYH2Q9UKX2 1941 aa23.31■■□□□ 1.32
CTU2-204ENST00000564105 COL1A1P02452 1464 aaPredicted RBP23.31■■□□□ 1.32
CTU2-204ENST00000564105 IL1R1P14778 569 aa23.31■■□□□ 1.32
CTU2-204ENST00000564105 SPATA5Q8NB90 893 aa23.31■■□□□ 1.32
CTU2-204ENST00000564105 COL4A5P29400 1685 aa23.3■■□□□ 1.32
CTU2-204ENST00000564105 ZBTB22O15209 634 aa23.3■■□□□ 1.32
CTU2-204ENST00000564105 IARSP41252 1262 aaKnown RBP23.3■■□□□ 1.32
CTU2-204ENST00000564105 ZAP70P43403 619 aa23.3■■□□□ 1.32
CTU2-204ENST00000564105 RASSF7Q02833 373 aa23.3■■□□□ 1.32
CTU2-204ENST00000564105 RILPL2Q969X0 211 aa23.3■■□□□ 1.32
CTU2-204ENST00000564105 DBNDD1Q9H9R9 158 aa23.3■■□□□ 1.32
CTU2-204ENST00000564105 LARGE2Q8N3Y3 721 aa23.29■■□□□ 1.32
CTU2-204ENST00000564105 EDC3Q96F86 508 aaKnown RBP23.29■■□□□ 1.32
CTU2-204ENST00000564105 PAG1Q9NWQ8 432 aa23.29■■□□□ 1.32
CTU2-204ENST00000564105 MAST2Q6P0Q8 1798 aa23.29■■□□□ 1.32
CTU2-204ENST00000564105 TIAM2Q8IVF5 1701 aa23.29■■□□□ 1.32
CTU2-204ENST00000564105 GOLIM4O00461 696 aa23.28■■□□□ 1.32
CTU2-204ENST00000564105 SDSP20132 328 aa23.28■■□□□ 1.32
CTU2-204ENST00000564105 CNTROBQ8N137 903 aa23.28■■□□□ 1.32
CTU2-204ENST00000564105 ECE2O60344 883 aa23.27■■□□□ 1.32
CTU2-204ENST00000564105 PODNQ7Z5L7 613 aa23.27■■□□□ 1.32
CTU2-204ENST00000564105 PDS5AQ29RF7 1337 aaKnown RBP23.27■■□□□ 1.32
CTU2-204ENST00000564105 KIF3CO14782 793 aa23.27■■□□□ 1.32
CTU2-204ENST00000564105 CYP2E1P05181 493 aaPredicted RBP23.27■■□□□ 1.32
CTU2-204ENST00000564105 CHAF1AQ13111 956 aaPredicted RBP23.27■■□□□ 1.32
CTU2-204ENST00000564105 EVI5LQ96CN4 794 aa23.27■■□□□ 1.32
CTU2-204ENST00000564105 ANTXR1Q9H6X2 564 aa23.27■■□□□ 1.32
CTU2-204ENST00000564105 C9orf131Q5VYM1 1079 aa23.26■■□□□ 1.31
CTU2-204ENST00000564105 TTF1Q15361 905 aaPredicted RBP23.25■■□□□ 1.31
CTU2-204ENST00000564105 JAG2Q9Y219 1238 aa23.25■■□□□ 1.31
CTU2-204ENST00000564105 NIM1KQ8IY84 436 aa23.24■■□□□ 1.31
CTU2-204ENST00000564105 FAM205AQ6ZU69 1335 aa23.24■■□□□ 1.31
CTU2-204ENST00000564105 PRELPP51888 382 aa23.23■■□□□ 1.31
CTU2-204ENST00000564105 GTF2IP78347 998 aa23.23■■□□□ 1.31
CTU2-204ENST00000564105 TBC1D9Q6ZT07 1266 aa23.23■■□□□ 1.31
CTU2-204ENST00000564105 WDR66Q8TBY9 1149 aa23.23■■□□□ 1.31
CTU2-204ENST00000564105 FSD1Q9BTV5 496 aa23.23■■□□□ 1.31
CTU2-204ENST00000564105 KBTBD3Q8NAB2 608 aa23.23■■□□□ 1.31
CTU2-204ENST00000564105 JDP2Q8WYK2 163 aa23.23■■□□□ 1.31
CTU2-204ENST00000564105 FBXW7Q969H0 707 aa23.23■■□□□ 1.31
CTU2-204ENST00000564105 PIH1D3Q9NQM4 214 aaKnown RBP23.23■■□□□ 1.31
CTU2-204ENST00000564105 YDJCA8MPS7 323 aa23.22■■□□□ 1.31
CTU2-204ENST00000564105 TTLL5Q6EMB2 1281 aa23.22■■□□□ 1.31
CTU2-204ENST00000564105 KCNQ5Q9NR82 932 aa23.22■■□□□ 1.31
CTU2-204ENST00000564105 ABCF2Q9UG63 623 aa23.22■■□□□ 1.31
CTU2-204ENST00000564105 LMNB1P20700 586 aa23.21■■□□□ 1.31
CTU2-204ENST00000564105 RNF181Q9P0P0 153 aa23.21■■□□□ 1.31
CTU2-204ENST00000564105 ZNRF3Q9ULT6 936 aa23.21■■□□□ 1.31
CTU2-204ENST00000564105 SALL1Q9NSC2 1324 aa23.21■■□□□ 1.31
CTU2-204ENST00000564105 ZGPATQ8N5A5 531 aaKnown RBP23.2■■□□□ 1.3
CTU2-204ENST00000564105 TBC1D22AQ8WUA7 517 aa23.2■■□□□ 1.3
CTU2-204ENST00000564105 NMRK2Q9NPI5 230 aa23.19■■□□□ 1.3
CTU2-204ENST00000564105 LRP2BPQ9P2M1 347 aa23.19■■□□□ 1.3
CTU2-204ENST00000564105 CDK5RAP2Q96SN8 1893 aa23.19■■□□□ 1.3
CTU2-204ENST00000564105 USP17L3A6NCW0 530 aa23.18■■□□□ 1.3
CTU2-204ENST00000564105 USP17L4A6NCW7 530 aa23.18■■□□□ 1.3
CTU2-204ENST00000564105 IDH1O75874 414 aaKnown RBP23.18■■□□□ 1.3
CTU2-204ENST00000564105 MFSD14BQ5SR56 506 aa23.18■■□□□ 1.3
CTU2-204ENST00000564105 STRIP1Q5VSL9 837 aa23.18■■□□□ 1.3
CTU2-204ENST00000564105 USP17L1Q7RTZ2 530 aa23.18■■□□□ 1.3
CTU2-204ENST00000564105 ECM29Q5VYK3 1845 aa23.18■■□□□ 1.3
CTU2-204ENST00000564105 RFX7Q2KHR2 1363 aa23.18■■□□□ 1.3
CTU2-204ENST00000564105 ADAMTSL1Q8N6G6 1762 aa23.18■■□□□ 1.3
CTU2-204ENST00000564105 CDC45O75419 566 aa23.18■■□□□ 1.3
CTU2-204ENST00000564105 ERICH6Q7L0X2 663 aa23.18■■□□□ 1.3
CTU2-204ENST00000564105 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.18■■□□□ 1.39e-8■■■□□ 18
CTU2-204ENST00000564105 MAP3K12Q12852 859 aa23.17■■□□□ 1.3
CTU2-204ENST00000564105 LRRFIP1Q32MZ4 808 aaKnown RBP23.17■■□□□ 1.3
CTU2-204ENST00000564105 SPTY2D1Q68D10 685 aaPredicted RBP23.17■■□□□ 1.3
CTU2-204ENST00000564105 RAI14Q9P0K7 980 aa23.17■■□□□ 1.3
CTU2-204ENST00000564105 RAD17O75943 681 aa23.16■■□□□ 1.3
CTU2-204ENST00000564105 PRDX5P30044 214 aa23.16■■□□□ 1.3
CTU2-204ENST00000564105 DACT2Q5SW24 774 aa23.16■■□□□ 1.3
CTU2-204ENST00000564105 HIP1O00291 1037 aa23.15■■□□□ 1.3
CTU2-204ENST00000564105 LDHBP07195 334 aaKnown RBP23.15■■□□□ 1.3
CTU2-204ENST00000564105 FKBP1AP62942 108 aaKnown RBP23.15■■□□□ 1.3
CTU2-204ENST00000564105 ZSCAN25Q6NSZ9 544 aa23.15■■□□□ 1.3
CTU2-204ENST00000564105 TICAM2Q86XR7 235 aa23.15■■□□□ 1.3
CTU2-204ENST00000564105 MXD3Q9BW11 206 aa23.15■■□□□ 1.3
CTU2-204ENST00000564105 CHMLP26374 656 aa23.14■■□□□ 1.3
CTU2-204ENST00000564105 CERS5Q8N5B7 392 aa23.14■■□□□ 1.3
CTU2-204ENST00000564105 DIAPH3Q9NSV4 1193 aa23.14■■□□□ 1.3
CTU2-204ENST00000564105 FZD9O00144 591 aa23.14■■□□□ 1.29
CTU2-204ENST00000564105 PSMD14O00487 310 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms