RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 HNRNPH2P55795 449 aaKnown RBP14.4□□□□□ -0.1
COMMD4-209ENST00000564068 AMOTL1Q8IY63 956 aa14.4□□□□□ -0.1
COMMD4-209ENST00000564068 GDAP1L1Q96MZ0 367 aa14.4□□□□□ -0.1
COMMD4-209ENST00000564068 SEC62Q99442 399 aaKnown RBP14.4□□□□□ -0.1
COMMD4-209ENST00000564068 MPHOSPH8Q99549 860 aa14.4□□□□□ -0.1
COMMD4-209ENST00000564068 KCNF1Q9H3M0 494 aa14.4□□□□□ -0.1
COMMD4-209ENST00000564068 GOLGA8FQ08AF8 430 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 GOLGA8DPQ0D2H9 430 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 ATL3Q6DD88 541 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 KIF6Q6ZMV9 814 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 CCDC196A0A1B0GTZ2 297 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 SSBP05455 408 aaKnown RBP eCLIP14.39□□□□□ -0.11
COMMD4-209ENST00000564068 HLTFQ14527 1009 aaKnown RBP eCLIP14.39□□□□□ -0.11
COMMD4-209ENST00000564068 KMT5BQ4FZB7 885 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 RRAGBQ5VZM2 374 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 KIAA0232Q92628 1395 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 A0A1B0GUL7 405 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 CLCN6P51797 869 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 TMEM87AQ8NBN3 555 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 C19orf44Q9H6X5 657 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 LUC7LQ9NQ29 371 aaKnown RBP14.39□□□□□ -0.11
COMMD4-209ENST00000564068 NFE2L3Q9Y4A8 694 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 ZEB2O60315 1214 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 NLRP12P59046 1061 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 CCDC144BQ3MJ40 725 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 BRAPQ7Z569 592 aa14.39□□□□□ -0.11
COMMD4-209ENST00000564068 USP27XA6NNY8 438 aa14.38□□□□□ -0.11
COMMD4-209ENST00000564068 AKR1B15C9JRZ8 316 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-209ENST00000564068 KANK3Q6NY19 840 aa14.38□□□□□ -0.11
COMMD4-209ENST00000564068 KRT28Q7Z3Y7 464 aa14.38□□□□□ -0.11
COMMD4-209ENST00000564068 TRMT44Q8IYL2 757 aaKnown RBP14.38□□□□□ -0.11
COMMD4-209ENST00000564068 LRRC59Q96AG4 307 aaKnown RBP14.38□□□□□ -0.11
COMMD4-209ENST00000564068 PPP1R13BQ96KQ4 1090 aa14.38□□□□□ -0.11
COMMD4-209ENST00000564068 LGR6Q9HBX8 967 aa14.38□□□□□ -0.11
COMMD4-209ENST00000564068 USO1O60763 962 aaKnown RBP14.38□□□□□ -0.11
COMMD4-209ENST00000564068 TRIM21P19474 475 aaKnown RBP14.38□□□□□ -0.11
COMMD4-209ENST00000564068 FKBP15Q5T1M5 1219 aa14.38□□□□□ -0.11
COMMD4-209ENST00000564068 CCT6AP40227 531 aaKnown RBP14.38□□□□□ -0.11
COMMD4-209ENST00000564068 LONRF3Q496Y0 759 aa14.38□□□□□ -0.11
COMMD4-209ENST00000564068 IGSF22Q8N9C0 903 aa14.38□□□□□ -0.11
COMMD4-209ENST00000564068 LLPHQ9BRT6 129 aaKnown RBP14.38□□□□□ -0.11
COMMD4-209ENST00000564068 IFIT5Q13325 482 aaKnown RBP14.37□□□□□ -0.11
COMMD4-209ENST00000564068 DPCR1Q3MIW9 517 aa14.37□□□□□ -0.11
COMMD4-209ENST00000564068 TDRD12Q587J7 1177 aaKnown RBP14.37□□□□□ -0.11
COMMD4-209ENST00000564068 NAA16Q6N069 864 aaPredicted RBP14.37□□□□□ -0.11
COMMD4-209ENST00000564068 PCDHA7Q9UN72 937 aa14.37□□□□□ -0.11
COMMD4-209ENST00000564068 ELP1O95163 1332 aa14.37□□□□□ -0.11
COMMD4-209ENST00000564068 RANBP6O60518 1105 aaKnown RBP14.37□□□□□ -0.11
COMMD4-209ENST00000564068 MTIF2P46199 727 aaKnown RBP14.37□□□□□ -0.11
COMMD4-209ENST00000564068 ATRIPQ8WXE1 791 aa14.37□□□□□ -0.11
COMMD4-209ENST00000564068 SUCLG2Q96I99 432 aa14.37□□□□□ -0.11
COMMD4-209ENST00000564068 GPR161Q8N6U8 529 aaKnown RBP14.37□□□□□ -0.11
COMMD4-209ENST00000564068 TAF4BQ92750 862 aa14.37□□□□□ -0.11
COMMD4-209ENST00000564068 ST7Q9NRC1 585 aa14.37□□□□□ -0.11
COMMD4-209ENST00000564068 PRDM4Q9UKN5 801 aa14.37□□□□□ -0.11
COMMD4-209ENST00000564068 KCNH3Q9ULD8 1083 aa14.37□□□□□ -0.11
COMMD4-209ENST00000564068 NDUFA8P51970 172 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 CHRNA2Q15822 529 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 CACNA2D4Q7Z3S7 1137 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 MAATS1Q7Z4T9 603 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 FLT4P35916 1363 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 PPARDQ03181 441 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 SYCP1Q15431 976 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 ADALQ6DHV7 355 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 ANKRD24Q8TF21 1146 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 NCOA3Q9Y6Q9 1424 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 MAP4K1Q92918 833 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 ZCCHC17Q9NP64 241 aaKnown RBP14.36□□□□□ -0.11
COMMD4-209ENST00000564068 EFCAB8A8MWE9 144 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 AKR1B10O60218 316 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 PNMA6AP0CW24 399 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-209ENST00000564068 GYS2P54840 703 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 PNOCQ13519 176 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 LDHAL6AQ6ZMR3 332 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 CTAGE1Q96RT6 745 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 TBX22Q9Y458 520 aa14.36□□□□□ -0.11
COMMD4-209ENST00000564068 MAP3K5Q99683 1374 aa14.35□□□□□ -0.11
COMMD4-209ENST00000564068 FANCLQ9NW38 375 aa14.35□□□□□ -0.11
COMMD4-209ENST00000564068 PPP2R2CQ9Y2T4 447 aa14.35□□□□□ -0.11
COMMD4-209ENST00000564068 POLR2DO15514 142 aaKnown RBP14.35□□□□□ -0.11
COMMD4-209ENST00000564068 ERLIN2O94905 339 aa14.35□□□□□ -0.11
COMMD4-209ENST00000564068 KRT18P05783 430 aaKnown RBP14.35□□□□□ -0.11
COMMD4-209ENST00000564068 SF3B2Q13435 895 aaKnown RBP14.35□□□□□ -0.11
COMMD4-209ENST00000564068 CCDC96Q2M329 555 aa14.35□□□□□ -0.11
COMMD4-209ENST00000564068 MICALCLQ6ZW33 695 aa14.35□□□□□ -0.11
COMMD4-209ENST00000564068 KRI1Q8N9T8 703 aaKnown RBP14.35□□□□□ -0.11
COMMD4-209ENST00000564068 TRIM47Q96LD4 638 aa14.35□□□□□ -0.11
COMMD4-209ENST00000564068 TRPM1Q7Z4N2 1603 aa14.35□□□□□ -0.11
COMMD4-209ENST00000564068 PTCH1Q13635 1447 aa14.35□□□□□ -0.11
COMMD4-209ENST00000564068 GOLGA6L7A0A1B0GV03 622 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 RNF113AO15541 343 aaKnown RBP14.34□□□□□ -0.11
COMMD4-209ENST00000564068 SLC9C2Q5TAH2 1124 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 TICAM2Q86XR7 235 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 OTUD6BQ8N6M0 293 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 IL17REQ8NFR9 667 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 VPS16Q9H269 839 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 PSDA5PKW4 1024 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-209ENST00000564068 KCNQ3O43525 872 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 PFKFB1P16118 471 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 NLRP5P59047 1200 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms