RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ANKRD18AQ8IVF6 992 aa10.1□□□□□ -0.79
HERPUD1-206ENST00000563343 MTMR14Q8NCE2 650 aa10.1□□□□□ -0.79
HERPUD1-206ENST00000563343 CCDC85AQ96PX6 553 aaPredicted RBP10.1□□□□□ -0.79
HERPUD1-206ENST00000563343 COA1Q9GZY4 146 aa10.1□□□□□ -0.79
HERPUD1-206ENST00000563343 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.1□□□□□ -0.79
HERPUD1-206ENST00000563343 MINPP1Q9UNW1 487 aa10.1□□□□□ -0.79
HERPUD1-206ENST00000563343 PPP2R3BQ9Y5P8 575 aa10.1□□□□□ -0.79
HERPUD1-206ENST00000563343 CHL1O00533 1208 aa10.09□□□□□ -0.79
HERPUD1-206ENST00000563343 MYCP01106 439 aaPredicted RBP10.09□□□□□ -0.79
HERPUD1-206ENST00000563343 PCCAP05165 728 aaPredicted RBP10.09□□□□□ -0.79
HERPUD1-206ENST00000563343 CCT4P50991 539 aaKnown RBP10.09□□□□□ -0.79
HERPUD1-206ENST00000563343 NBPF12Q5TAG4 269 aaPredicted RBP10.09□□□□□ -0.79
HERPUD1-206ENST00000563343 TTLL5Q6EMB2 1281 aa10.09□□□□□ -0.79
HERPUD1-206ENST00000563343 BRI3BPQ8WY22 251 aa10.09□□□□□ -0.79
HERPUD1-206ENST00000563343 JARID2Q92833 1246 aaPredicted RBP10.09□□□□□ -0.79
HERPUD1-206ENST00000563343 LRCH3Q96II8 777 aa10.09□□□□□ -0.79
HERPUD1-206ENST00000563343 ARHGAP39Q9C0H5 1083 aa10.09□□□□□ -0.79
HERPUD1-206ENST00000563343 DBF4Q9UBU7 674 aaPredicted RBP10.09□□□□□ -0.79
HERPUD1-206ENST00000563343 A0A1W2PPC1 479 aa10.08□□□□□ -0.8
HERPUD1-206ENST00000563343 ZBTB7BO15156 539 aaPredicted RBP10.08□□□□□ -0.8
HERPUD1-206ENST00000563343 KLRK1P26718 216 aa10.08□□□□□ -0.8
HERPUD1-206ENST00000563343 RIPK4P57078 832 aa10.08□□□□□ -0.8
HERPUD1-206ENST00000563343 MTFR1Q15390 333 aa10.08□□□□□ -0.8
HERPUD1-206ENST00000563343 HDGFL1Q5TGJ6 251 aa10.08□□□□□ -0.8
HERPUD1-206ENST00000563343 ANKRD13AQ8IZ07 590 aa10.08□□□□□ -0.8
HERPUD1-206ENST00000563343 CERS5Q8N5B7 392 aa10.08□□□□□ -0.8
HERPUD1-206ENST00000563343 DPF3Q92784 378 aa10.08□□□□□ -0.8
HERPUD1-206ENST00000563343 FBXW7Q969H0 707 aa10.08□□□□□ -0.8
HERPUD1-206ENST00000563343 OPTNQ96CV9 577 aa10.08□□□□□ -0.8
HERPUD1-206ENST00000563343 PCGF6Q9BYE7 350 aa10.08□□□□□ -0.8
HERPUD1-206ENST00000563343 BSDC1Q9NW68 430 aaPredicted RBP10.08□□□□□ -0.8
HERPUD1-206ENST00000563343 MAPK8IP3Q9UPT6 1336 aa10.07□□□□□ -0.8
HERPUD1-206ENST00000563343 IRS2Q9Y4H2 1338 aa10.07□□□□□ -0.8
HERPUD1-206ENST00000563343 HOXB7P09629 217 aa10.07□□□□□ -0.8
HERPUD1-206ENST00000563343 CTGFP29279 349 aa10.07□□□□□ -0.8
HERPUD1-206ENST00000563343 LACTBP83111 547 aaPredicted RBP10.07□□□□□ -0.8
HERPUD1-206ENST00000563343 ARHGEF6Q15052 776 aa10.07□□□□□ -0.8
HERPUD1-206ENST00000563343 TAF1CQ15572 869 aaPredicted RBP10.07□□□□□ -0.8
HERPUD1-206ENST00000563343 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.07□□□□□ -0.8
HERPUD1-206ENST00000563343 FAM43AQ8N2R8 423 aa10.07□□□□□ -0.8
HERPUD1-206ENST00000563343 CCDC191Q8NCU4 936 aa10.07□□□□□ -0.8
HERPUD1-206ENST00000563343 ZFYVE28Q9HCC9 887 aa10.07□□□□□ -0.8
HERPUD1-206ENST00000563343 HYPKQ9NX55 129 aa10.07□□□□□ -0.8
HERPUD1-206ENST00000563343 CLRN2A0PK11 232 aa10.06□□□□□ -0.8
HERPUD1-206ENST00000563343 HSP90B1P14625 803 aaKnown RBP10.06□□□□□ -0.8
HERPUD1-206ENST00000563343 TMPOP42166 694 aaKnown RBP10.06□□□□□ -0.8
HERPUD1-206ENST00000563343 GJA8P48165 433 aa10.06□□□□□ -0.8
HERPUD1-206ENST00000563343 IREB2P48200 963 aaKnown RBP10.06□□□□□ -0.8
HERPUD1-206ENST00000563343 GTF2IP78347 998 aa10.06□□□□□ -0.8
HERPUD1-206ENST00000563343 DLGAP5Q15398 846 aa10.06□□□□□ -0.8
HERPUD1-206ENST00000563343 SUPT20HL1Q3ZLR7 823 aa10.06□□□□□ -0.8
HERPUD1-206ENST00000563343 TTLL11Q8NHH1 800 aa10.06□□□□□ -0.8
HERPUD1-206ENST00000563343 PRMT6Q96LA8 375 aaPredicted RBP10.06□□□□□ -0.8
HERPUD1-206ENST00000563343 PHAXQ9H814 394 aaKnown RBP10.06□□□□□ -0.8
HERPUD1-206ENST00000563343 ELP3Q9H9T3 547 aa10.06□□□□□ -0.8
HERPUD1-206ENST00000563343 LEMD3Q9Y2U8 911 aa10.06□□□□□ -0.8
HERPUD1-206ENST00000563343 CCL15-CCL14A0A0B4J2E2 113 aa10.05□□□□□ -0.8
HERPUD1-206ENST00000563343 TLR2O60603 784 aa10.05□□□□□ -0.8
HERPUD1-206ENST00000563343 PRMT2P55345 433 aa10.05□□□□□ -0.8
HERPUD1-206ENST00000563343 CTSWP56202 376 aa10.05□□□□□ -0.8
HERPUD1-206ENST00000563343 CCL15Q16663 113 aa10.05□□□□□ -0.8
HERPUD1-206ENST00000563343 CDAN1Q8IWY9 1227 aa10.05□□□□□ -0.8
HERPUD1-206ENST00000563343 TEPSINQ96N21 525 aa10.05□□□□□ -0.8
HERPUD1-206ENST00000563343 CDC5LQ99459 802 aaKnown RBP10.05□□□□□ -0.8
HERPUD1-206ENST00000563343 MYD88Q99836 296 aa10.05□□□□□ -0.8
HERPUD1-206ENST00000563343 PNNQ9H307 717 aaKnown RBP10.05□□□□□ -0.8
HERPUD1-206ENST00000563343 GREM2Q9H772 168 aa10.05□□□□□ -0.8
HERPUD1-206ENST00000563343 GNRH1P01148 92 aa10.04□□□□□ -0.8
HERPUD1-206ENST00000563343 GJB1P08034 283 aa10.04□□□□□ -0.8
HERPUD1-206ENST00000563343 RASA3Q14644 834 aa10.04□□□□□ -0.8
HERPUD1-206ENST00000563343 CFAP100Q494V2 611 aa10.04□□□□□ -0.8
HERPUD1-206ENST00000563343 RIC3Q7Z5B4 369 aa10.04□□□□□ -0.8
HERPUD1-206ENST00000563343 HTATIP2Q9BUP3 242 aa10.04□□□□□ -0.8
HERPUD1-206ENST00000563343 COL25A1Q9BXS0 654 aaPredicted RBP10.04□□□□□ -0.8
HERPUD1-206ENST00000563343 CD209Q9NNX6 404 aa10.04□□□□□ -0.8
HERPUD1-206ENST00000563343 CWC25Q9NXE8 425 aaPredicted RBP10.04□□□□□ -0.8
HERPUD1-206ENST00000563343 DOCK3Q8IZD9 2030 aa10.04□□□□□ -0.8
HERPUD1-206ENST00000563343 GTF2A2P52657 109 aa10.03□□□□□ -0.8
HERPUD1-206ENST00000563343 VGLL4Q14135 290 aa10.03□□□□□ -0.8
HERPUD1-206ENST00000563343 GPR153Q6NV75 609 aa10.03□□□□□ -0.8
HERPUD1-206ENST00000563343 C17orf99Q6UX52 265 aa10.03□□□□□ -0.8
HERPUD1-206ENST00000563343 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.03□□□□□ -0.8
HERPUD1-206ENST00000563343 VEZTQ9HBM0 779 aa10.03□□□□□ -0.8
HERPUD1-206ENST00000563343 ZCCHC17Q9NP64 241 aaKnown RBP10.03□□□□□ -0.8
HERPUD1-206ENST00000563343 SPTBN5Q9NRC6 3674 aaKnown RBP10.03□□□□□ -0.8
HERPUD1-206ENST00000563343 TRIM35Q9UPQ4 493 aa10.03□□□□□ -0.8
HERPUD1-206ENST00000563343 PTPRFP10586 1907 aa10.03□□□□□ -0.8
HERPUD1-206ENST00000563343 ADGRA2Q96PE1 1338 aa10.03□□□□□ -0.8
HERPUD1-206ENST00000563343 SPDYE5A6NIY4 337 aa10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 IGKV5-2P06315 115 aa10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 CCL5P13501 91 aa10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 FKBP1AP62942 108 aaKnown RBP10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 GOLGA2Q08379 1002 aa10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 LMOD3Q0VAK6 560 aa10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 DUSP27Q5VZP5 1158 aa10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 NKX2-3Q8TAU0 364 aa10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 TRIM47Q96LD4 638 aa10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 GDF15Q99988 308 aa10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 METTL22Q9BUU2 404 aaPredicted RBP10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 STAP2Q9UGK3 403 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms