RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ILDR1Q86SU0 546 aaPredicted RBP15.27■□□□□ 0.04
USB1-207ENST00000563149 APPBP2Q92624 585 aa15.27■□□□□ 0.04
USB1-207ENST00000563149 ZNF594Q96JF6 807 aaPredicted RBP15.27■□□□□ 0.04
USB1-207ENST00000563149 BPIFA3Q9BQP9 254 aa15.27■□□□□ 0.04
USB1-207ENST00000563149 NCOA5Q9HCD5 579 aaKnown RBP15.27■□□□□ 0.04
USB1-207ENST00000563149 KCND1Q9NSA2 647 aa15.27■□□□□ 0.04
USB1-207ENST00000563149 POLR3EQ9NVU0 708 aa15.27■□□□□ 0.04
USB1-207ENST00000563149 PCDHA7Q9UN72 937 aa15.27■□□□□ 0.04
USB1-207ENST00000563149 TNS2Q63HR2 1409 aa15.27■□□□□ 0.04
USB1-207ENST00000563149 TCIRG1Q13488 830 aa15.26■□□□□ 0.03
USB1-207ENST00000563149 CCDC144BQ3MJ40 725 aa15.26■□□□□ 0.03
USB1-207ENST00000563149 SLFNL1Q499Z3 407 aa15.26■□□□□ 0.03
USB1-207ENST00000563149 GORABQ5T7V8 394 aa15.26■□□□□ 0.03
USB1-207ENST00000563149 DHX40Q8IX18 779 aaKnown RBP15.26■□□□□ 0.03
USB1-207ENST00000563149 CCDC144CPQ8IYA2 1237 aa15.26■□□□□ 0.03
USB1-207ENST00000563149 LINC00301Q8NCQ3 95 aa15.26■□□□□ 0.03
USB1-207ENST00000563149 NCOA7Q8NI08 942 aa15.26■□□□□ 0.03
USB1-207ENST00000563149 NAP1L2Q9ULW6 460 aaPredicted RBP15.26■□□□□ 0.03
USB1-207ENST00000563149 NWD2Q9ULI1 1742 aa15.26■□□□□ 0.03
USB1-207ENST00000563149 PCCAP05165 728 aaPredicted RBP15.26■□□□□ 0.03
USB1-207ENST00000563149 GSDMDP57764 484 aa15.26■□□□□ 0.03
USB1-207ENST00000563149 TPD52L1Q16890 204 aaPredicted RBP15.26■□□□□ 0.03
USB1-207ENST00000563149 MB21D2Q8IYB1 491 aaPredicted RBP15.26■□□□□ 0.03
USB1-207ENST00000563149 PDCL2Q8N4E4 241 aa15.26■□□□□ 0.03
USB1-207ENST00000563149 DDX17Q92841 729 aaKnown RBP15.26■□□□□ 0.03
USB1-207ENST00000563149 XAGE2Q96GT9 111 aa15.26■□□□□ 0.03
USB1-207ENST00000563149 C8orf76Q96K31 380 aa15.26■□□□□ 0.03
USB1-207ENST00000563149 PUS3Q9BZE2 481 aaKnown RBP15.26■□□□□ 0.03
USB1-207ENST00000563149 FTOQ9C0B1 505 aaKnown RBP eCLIP15.26■□□□□ 0.03
USB1-207ENST00000563149 ZBTB3Q9H5J0 574 aa15.26■□□□□ 0.03
USB1-207ENST00000563149 IMPACTQ9P2X3 320 aa15.26■□□□□ 0.03
USB1-207ENST00000563149 DDX60Q8IY21 1712 aaKnown RBP15.25■□□□□ 0.03
USB1-207ENST00000563149 A0A0G2JLW4 131 aa15.25■□□□□ 0.03
USB1-207ENST00000563149 PRC1O43663 620 aa15.25■□□□□ 0.03
USB1-207ENST00000563149 CSF1RP07333 972 aa15.25■□□□□ 0.03
USB1-207ENST00000563149 FKBP4Q02790 459 aaKnown RBP eCLIP15.25■□□□□ 0.03
USB1-207ENST00000563149 STK38Q15208 465 aa15.25■□□□□ 0.03
USB1-207ENST00000563149 FBXO18Q8NFZ0 1043 aa15.25■□□□□ 0.03
USB1-207ENST00000563149 TSC1Q92574 1164 aa15.25■□□□□ 0.03
USB1-207ENST00000563149 TEX13AQ9BXU3 409 aaPredicted RBP15.25■□□□□ 0.03
USB1-207ENST00000563149 FGAP02671 866 aa15.24■□□□□ 0.03
USB1-207ENST00000563149 FOSBP53539 338 aa15.24■□□□□ 0.03
USB1-207ENST00000563149 GUCY1B3Q02153 619 aa15.24■□□□□ 0.03
USB1-207ENST00000563149 SF3A1Q15459 793 aaKnown RBP15.24■□□□□ 0.03
USB1-207ENST00000563149 WASHC4Q2M389 1173 aa15.24■□□□□ 0.03
USB1-207ENST00000563149 TTLL5Q6EMB2 1281 aa15.24■□□□□ 0.03
USB1-207ENST00000563149 ZNF512BQ96KM6 892 aaPredicted RBP15.24■□□□□ 0.03
USB1-207ENST00000563149 SDF4Q9BRK5 362 aa15.24■□□□□ 0.03
USB1-207ENST00000563149 ZNF213O14771 459 aa15.24■□□□□ 0.03
USB1-207ENST00000563149 CHST3Q7LGC8 479 aa15.24■□□□□ 0.03
USB1-207ENST00000563149 RALYLQ86SE5 291 aaKnown RBP15.24■□□□□ 0.03
USB1-207ENST00000563149 C16orf45Q96MC5 204 aaPredicted RBP15.24■□□□□ 0.03
USB1-207ENST00000563149 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.24■□□□□ 0.03
USB1-207ENST00000563149 KIAA1468Q9P260 1216 aa15.24■□□□□ 0.03
USB1-207ENST00000563149 ORC3Q9UBD5 711 aaPredicted RBP15.24■□□□□ 0.03
USB1-207ENST00000563149 KLF18A0A0U1RQI7 1052 aa15.23■□□□□ 0.03
USB1-207ENST00000563149 KIF2AO00139 706 aaPredicted RBP15.23■□□□□ 0.03
USB1-207ENST00000563149 SPTLC2O15270 562 aa15.23■□□□□ 0.03
USB1-207ENST00000563149 FOXP2O15409 715 aa15.23■□□□□ 0.03
USB1-207ENST00000563149 TPM4P67936 248 aa15.23■□□□□ 0.03
USB1-207ENST00000563149 ZRSR1Q15695 479 aaKnown RBP15.23■□□□□ 0.03
USB1-207ENST00000563149 MYSM1Q5VVJ2 828 aa15.23■□□□□ 0.03
USB1-207ENST00000563149 SYNE3Q6ZMZ3 975 aa15.23■□□□□ 0.03
USB1-207ENST00000563149 TOM1L2Q6ZVM7 507 aa15.23■□□□□ 0.03
USB1-207ENST00000563149 OSBPL5Q9H0X9 879 aaPredicted RBP15.23■□□□□ 0.03
USB1-207ENST00000563149 CPLX1O14810 134 aa15.22■□□□□ 0.03
USB1-207ENST00000563149 IL2RBP14784 551 aa15.22■□□□□ 0.03
USB1-207ENST00000563149 TAF7LQ5H9L4 462 aa15.22■□□□□ 0.03
USB1-207ENST00000563149 PPP4R3BQ5MIZ7 849 aa15.22■□□□□ 0.03
USB1-207ENST00000563149 CEP135Q66GS9 1140 aa15.22■□□□□ 0.03
USB1-207ENST00000563149 AOPEPQ8N6M6 819 aa15.22■□□□□ 0.03
USB1-207ENST00000563149 CCDC112Q8NEF3 446 aa15.22■□□□□ 0.03
USB1-207ENST00000563149 TIGD1Q96MW7 591 aa15.22■□□□□ 0.03
USB1-207ENST00000563149 CARD10Q9BWT7 1032 aa15.22■□□□□ 0.03
USB1-207ENST00000563149 HPS5Q9UPZ3 1129 aa15.22■□□□□ 0.03
USB1-207ENST00000563149 CDHR2Q9BYE9 1310 aa15.22■□□□□ 0.03
USB1-207ENST00000563149 MYH7P12883 1935 aa15.22■□□□□ 0.03
USB1-207ENST00000563149 GOLGA8BA8MQT2 603 aa15.21■□□□□ 0.03
USB1-207ENST00000563149 SKILP12757 684 aa15.21■□□□□ 0.03
USB1-207ENST00000563149 ZAP70P43403 619 aa15.21■□□□□ 0.03
USB1-207ENST00000563149 NLRP12P59046 1061 aa15.21■□□□□ 0.03
USB1-207ENST00000563149 IFIT5Q13325 482 aaKnown RBP15.21■□□□□ 0.03
USB1-207ENST00000563149 TTF1Q15361 905 aaPredicted RBP15.21■□□□□ 0.03
USB1-207ENST00000563149 ZBTB38Q8NAP3 1195 aaPredicted RBP15.21■□□□□ 0.03
USB1-207ENST00000563149 FEZ1Q99689 392 aa15.21■□□□□ 0.03
USB1-207ENST00000563149 CLIC4Q9Y696 253 aa15.21■□□□□ 0.03
USB1-207ENST00000563149 STRCP1A6NGW2 1772 aa15.21■□□□□ 0.03
USB1-207ENST00000563149 A0A1B0GVL5 298 aa15.21■□□□□ 0.02
USB1-207ENST00000563149 CCDC69A6NI79 296 aa15.21■□□□□ 0.02
USB1-207ENST00000563149 GPAA1O43292 621 aa15.21■□□□□ 0.02
USB1-207ENST00000563149 CDKL5O76039 1030 aa15.21■□□□□ 0.02
USB1-207ENST00000563149 CMA1P23946 247 aa15.21■□□□□ 0.02
USB1-207ENST00000563149 ADORA1P30542 326 aa15.21■□□□□ 0.02
USB1-207ENST00000563149 NDUFA8P51970 172 aa15.21■□□□□ 0.02
USB1-207ENST00000563149 ANTXR2P58335 489 aa15.21■□□□□ 0.02
USB1-207ENST00000563149 CCZ1BP86790 482 aa15.21■□□□□ 0.02
USB1-207ENST00000563149 CCZ1P86791 482 aaPredicted RBP15.21■□□□□ 0.02
USB1-207ENST00000563149 TRDNQ13061 729 aa15.21■□□□□ 0.02
USB1-207ENST00000563149 PTPN14Q15678 1187 aa15.21■□□□□ 0.02
USB1-207ENST00000563149 KIF6Q6ZMV9 814 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms