RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 TRAF5O00463 557 aa11.69□□□□□ -0.54
CHRFAM7A-204ENST00000562729 CT47B1P0C2W7 299 aaPredicted RBP11.69□□□□□ -0.54
CHRFAM7A-204ENST00000562729 KIF4BQ2VIQ3 1234 aa11.69□□□□□ -0.54
CHRFAM7A-204ENST00000562729 DEFB115Q30KQ5 88 aa11.69□□□□□ -0.54
CHRFAM7A-204ENST00000562729 RSBN1LQ6PCB5 846 aaPredicted RBP11.69□□□□□ -0.54
CHRFAM7A-204ENST00000562729 OGFOD1Q8N543 542 aa11.69□□□□□ -0.54
CHRFAM7A-204ENST00000562729 JMYQ8N9B5 988 aa11.69□□□□□ -0.54
CHRFAM7A-204ENST00000562729 TRPM4Q8TD43 1214 aa11.69□□□□□ -0.54
CHRFAM7A-204ENST00000562729 AIDAQ96BJ3 306 aa11.69□□□□□ -0.54
CHRFAM7A-204ENST00000562729 COA1Q9GZY4 146 aa11.69□□□□□ -0.54
CHRFAM7A-204ENST00000562729 CNTNAP1P78357 1384 aa11.68□□□□□ -0.54
CHRFAM7A-204ENST00000562729 SHTN1A0MZ66 631 aa11.68□□□□□ -0.54
CHRFAM7A-204ENST00000562729 TAF5LO75529 589 aa11.68□□□□□ -0.54
CHRFAM7A-204ENST00000562729 CELF2O95319 508 aaKnown RBP11.68□□□□□ -0.54
CHRFAM7A-204ENST00000562729 VIL1P09327 827 aaKnown RBP11.68□□□□□ -0.54
CHRFAM7A-204ENST00000562729 USP17L8P0C7I0 530 aa11.68□□□□□ -0.54
CHRFAM7A-204ENST00000562729 AGBL3Q8NEM8 1001 aa11.68□□□□□ -0.54
CHRFAM7A-204ENST00000562729 HELBQ8NG08 1087 aaPredicted RBP11.68□□□□□ -0.54
CHRFAM7A-204ENST00000562729 GLIS2Q9BZE0 524 aaPredicted RBP11.68□□□□□ -0.54
CHRFAM7A-204ENST00000562729 CIZ1Q9ULV3 898 aaPredicted RBP11.68□□□□□ -0.54
CHRFAM7A-204ENST00000562729 MYO3BQ8WXR4 1341 aa11.67□□□□□ -0.54
CHRFAM7A-204ENST00000562729 NBPF7P0C2Y1 421 aaPredicted RBP11.67□□□□□ -0.54
CHRFAM7A-204ENST00000562729 ECE1P42892 770 aa11.67□□□□□ -0.54
CHRFAM7A-204ENST00000562729 HNRNPUQ00839 825 aaKnown RBP eCLIP11.67□□□□□ -0.54
CHRFAM7A-204ENST00000562729 KRT26Q7Z3Y9 468 aa11.67□□□□□ -0.54
CHRFAM7A-204ENST00000562729 ZNF804AQ7Z570 1209 aa11.67□□□□□ -0.54
CHRFAM7A-204ENST00000562729 USP48Q86UV5 1035 aa11.67□□□□□ -0.54
CHRFAM7A-204ENST00000562729 SULF1Q8IWU6 871 aa11.67□□□□□ -0.54
CHRFAM7A-204ENST00000562729 SUCLG2Q96I99 432 aa11.67□□□□□ -0.54
CHRFAM7A-204ENST00000562729 ZNF594Q96JF6 807 aaPredicted RBP11.67□□□□□ -0.54
CHRFAM7A-204ENST00000562729 API5Q9BZZ5 524 aaKnown RBP11.67□□□□□ -0.54
CHRFAM7A-204ENST00000562729 BOLA1Q9Y3E2 137 aa11.67□□□□□ -0.54
CHRFAM7A-204ENST00000562729 TRPM7Q96QT4 1865 aa11.66□□□□□ -0.54
CHRFAM7A-204ENST00000562729 WTIPA6NIX2 430 aaPredicted RBP11.66□□□□□ -0.54
CHRFAM7A-204ENST00000562729 HSPA1AP0DMV8 641 aaKnown RBP11.66□□□□□ -0.54
CHRFAM7A-204ENST00000562729 HSPA1BP0DMV9 641 aaKnown RBP11.66□□□□□ -0.54
CHRFAM7A-204ENST00000562729 VEGFBP49765 207 aa11.66□□□□□ -0.54
CHRFAM7A-204ENST00000562729 HIRAP54198 1017 aaPredicted RBP11.66□□□□□ -0.54
CHRFAM7A-204ENST00000562729 FMR1Q06787 632 aaKnown RBP eCLIP11.66□□□□□ -0.54
CHRFAM7A-204ENST00000562729 EPHA10Q5JZY3 1008 aa11.66□□□□□ -0.54
CHRFAM7A-204ENST00000562729 TTLL5Q6EMB2 1281 aa11.66□□□□□ -0.54
CHRFAM7A-204ENST00000562729 BICC1Q9H694 974 aaKnown RBP11.66□□□□□ -0.54
CHRFAM7A-204ENST00000562729 MYOZ2Q9NPC6 264 aa11.66□□□□□ -0.54
CHRFAM7A-204ENST00000562729 HDAC9Q9UKV0 1011 aa11.66□□□□□ -0.54
CHRFAM7A-204ENST00000562729 NOB1Q9ULX3 412 aaKnown RBP11.66□□□□□ -0.54
CHRFAM7A-204ENST00000562729 HDAC5Q9UQL6 1122 aa11.66□□□□□ -0.54
CHRFAM7A-204ENST00000562729 KIF16BQ96L93 1317 aa11.65□□□□□ -0.54
CHRFAM7A-204ENST00000562729 SCN9AQ15858 1988 aa11.65□□□□□ -0.54
CHRFAM7A-204ENST00000562729 HOXB3P14651 431 aaPredicted RBP11.65□□□□□ -0.54
CHRFAM7A-204ENST00000562729 GTF2IP78347 998 aa11.65□□□□□ -0.54
CHRFAM7A-204ENST00000562729 STRIP1Q5VSL9 837 aa11.65□□□□□ -0.54
CHRFAM7A-204ENST00000562729 VPS37DQ86XT2 251 aa11.65□□□□□ -0.54
CHRFAM7A-204ENST00000562729 BEGAINQ9BUH8 593 aa11.65□□□□□ -0.54
CHRFAM7A-204ENST00000562729 GGA3Q9NZ52 723 aa11.65□□□□□ -0.54
CHRFAM7A-204ENST00000562729 PGAP2Q9UHJ9 254 aa11.65□□□□□ -0.54
CHRFAM7A-204ENST00000562729 MROH5Q6ZUA9 1318 aa11.64□□□□□ -0.55
CHRFAM7A-204ENST00000562729 WDR33Q9C0J8 1336 aaKnown RBP11.64□□□□□ -0.55
CHRFAM7A-204ENST00000562729 RASSF10A6NK89 507 aa11.64□□□□□ -0.55
CHRFAM7A-204ENST00000562729 IPO8O15397 1037 aaKnown RBP11.64□□□□□ -0.55
CHRFAM7A-204ENST00000562729 FRAT2O75474 233 aaPredicted RBP11.64□□□□□ -0.55
CHRFAM7A-204ENST00000562729 EGFRP00533 1210 aa11.64□□□□□ -0.55
CHRFAM7A-204ENST00000562729 UBTFL1P0CB47 393 aaPredicted RBP11.64□□□□□ -0.55
CHRFAM7A-204ENST00000562729 KLRK1P26718 216 aa11.64□□□□□ -0.55
CHRFAM7A-204ENST00000562729 SCARF1Q14162 830 aa11.64□□□□□ -0.55
CHRFAM7A-204ENST00000562729 METTL24Q5JXM2 366 aa11.64□□□□□ -0.55
CHRFAM7A-204ENST00000562729 ANGEL2Q5VTE6 544 aaKnown RBP11.64□□□□□ -0.55
CHRFAM7A-204ENST00000562729 TXNRD3Q86VQ6 643 aa11.64□□□□□ -0.55
CHRFAM7A-204ENST00000562729 TRMT2AQ8IZ69 625 aaKnown RBP11.64□□□□□ -0.55
CHRFAM7A-204ENST00000562729 C2orf69Q8N8R5 385 aa11.64□□□□□ -0.55
CHRFAM7A-204ENST00000562729 FRAT1Q92837 279 aaPredicted RBP11.64□□□□□ -0.55
CHRFAM7A-204ENST00000562729 PSME4Q14997 1843 aa11.64□□□□□ -0.55
CHRFAM7A-204ENST00000562729 UTYO14607 1347 aa11.63□□□□□ -0.55
CHRFAM7A-204ENST00000562729 ADM5C9JUS6 153 aa11.63□□□□□ -0.55
CHRFAM7A-204ENST00000562729 ZNF280AP59817 542 aaPredicted RBP11.63□□□□□ -0.55
CHRFAM7A-204ENST00000562729 DACT2Q5SW24 774 aa11.63□□□□□ -0.55
CHRFAM7A-204ENST00000562729 CST9Q5W186 159 aa11.63□□□□□ -0.55
CHRFAM7A-204ENST00000562729 CYP4F22Q6NT55 531 aa11.63□□□□□ -0.55
CHRFAM7A-204ENST00000562729 KIAA0825Q8IV33 1275 aa11.63□□□□□ -0.55
CHRFAM7A-204ENST00000562729 CAPNS2Q96L46 248 aa11.63□□□□□ -0.55
CHRFAM7A-204ENST00000562729 MXD3Q9BW11 206 aa11.63□□□□□ -0.55
CHRFAM7A-204ENST00000562729 CD209Q9NNX6 404 aa11.63□□□□□ -0.55
CHRFAM7A-204ENST00000562729 TLL2Q9Y6L7 1015 aa11.63□□□□□ -0.55
CHRFAM7A-204ENST00000562729 SNAP23O00161 211 aa11.62□□□□□ -0.55
CHRFAM7A-204ENST00000562729 MMP14P50281 582 aa11.62□□□□□ -0.55
CHRFAM7A-204ENST00000562729 RARSP54136 660 aaKnown RBP11.62□□□□□ -0.55
CHRFAM7A-204ENST00000562729 MAP2K1Q02750 393 aaPredicted RBP11.62□□□□□ -0.55
CHRFAM7A-204ENST00000562729 CAVIN4Q5BKX8 364 aa11.62□□□□□ -0.55
CHRFAM7A-204ENST00000562729 USP44Q9H0E7 712 aa11.62□□□□□ -0.55
CHRFAM7A-204ENST00000562729 ZNF609O15014 1411 aa11.61□□□□□ -0.55
CHRFAM7A-204ENST00000562729 PCNTO95613 3336 aa11.61□□□□□ -0.55
CHRFAM7A-204ENST00000562729 F8W031 263 aaPredicted RBP11.61□□□□□ -0.55
CHRFAM7A-204ENST00000562729 MYO1BO43795 1136 aa11.61□□□□□ -0.55
CHRFAM7A-204ENST00000562729 HIBADHP31937 336 aaKnown RBP11.61□□□□□ -0.55
CHRFAM7A-204ENST00000562729 NF2P35240 595 aa11.61□□□□□ -0.55
CHRFAM7A-204ENST00000562729 RBM5P52756 815 aaKnown RBP eCLIP11.61□□□□□ -0.55
CHRFAM7A-204ENST00000562729 HUNKP57058 714 aa11.61□□□□□ -0.55
CHRFAM7A-204ENST00000562729 UBE4AQ14139 1066 aa11.61□□□□□ -0.55
CHRFAM7A-204ENST00000562729 TTLL12Q14166 644 aaPredicted RBP11.61□□□□□ -0.55
CHRFAM7A-204ENST00000562729 RABL6Q3YEC7 729 aaPredicted RBP11.61□□□□□ -0.55
CHRFAM7A-204ENST00000562729 SAPCD2Q86UD0 394 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms