RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 LOC105371045A0A1W2PR82 267 aa8.54□□□□□ -1.04
UBR1-203ENST00000562173 ZBTB7CA1YPR0 619 aa8.54□□□□□ -1.04
UBR1-203ENST00000562173 KHNYNO15037 678 aaKnown RBP8.54□□□□□ -1.04
UBR1-203ENST00000562173 RPLP1P05386 114 aaKnown RBP8.54□□□□□ -1.04
UBR1-203ENST00000562173 ZNF772Q68DY9 489 aaPredicted RBP8.54□□□□□ -1.04
UBR1-203ENST00000562173 SVOPQ8N4V2 548 aa8.54□□□□□ -1.04
UBR1-203ENST00000562173 MARK1Q9P0L2 795 aa8.54□□□□□ -1.04
UBR1-203ENST00000562173 LMTK2Q8IWU2 1503 aa8.54□□□□□ -1.04
UBR1-203ENST00000562173 DAPK1P53355 1430 aa8.54□□□□□ -1.04
UBR1-203ENST00000562173 MYOM3Q5VTT5 1437 aa8.54□□□□□ -1.04
UBR1-203ENST00000562173 FGD6Q6ZV73 1430 aa8.54□□□□□ -1.04
UBR1-203ENST00000562173 EIF1AXP47813 144 aaKnown RBP8.53□□□□□ -1.04
UBR1-203ENST00000562173 MTMR3Q13615 1198 aa8.53□□□□□ -1.04
UBR1-203ENST00000562173 LYPD4Q6UWN0 246 aa8.53□□□□□ -1.04
UBR1-203ENST00000562173 SND1Q7KZF4 910 aaKnown RBP eCLIP8.53□□□□□ -1.04
UBR1-203ENST00000562173 AVENQ9NQS1 362 aaPredicted RBP8.53□□□□□ -1.04
UBR1-203ENST00000562173 MBIPQ9NS73 344 aa8.53□□□□□ -1.04
UBR1-203ENST00000562173 KCNH4Q9UQ05 1017 aa8.53□□□□□ -1.04
UBR1-203ENST00000562173 MARF1Q9Y4F3 1742 aaKnown RBP8.53□□□□□ -1.04
UBR1-203ENST00000562173 SPATA31A6Q5VVP1 1343 aa8.53□□□□□ -1.04
UBR1-203ENST00000562173 CDK12Q9NYV4 1490 aaPredicted RBP8.52□□□□□ -1.05
UBR1-203ENST00000562173 PLEKHG1Q9ULL1 1385 aa8.52□□□□□ -1.05
UBR1-203ENST00000562173 PCSK2P16519 638 aa8.52□□□□□ -1.05
UBR1-203ENST00000562173 USP5P45974 858 aa8.52□□□□□ -1.05
UBR1-203ENST00000562173 DEFB132Q7Z7B7 95 aa8.52□□□□□ -1.05
UBR1-203ENST00000562173 PIK3R5Q8WYR1 880 aa8.52□□□□□ -1.05
UBR1-203ENST00000562173 TRPM2O94759 1503 aa8.52□□□□□ -1.05
UBR1-203ENST00000562173 ERBINQ96RT1 1412 aa8.52□□□□□ -1.05
UBR1-203ENST00000562173 MX2P20592 715 aa8.51□□□□□ -1.05
UBR1-203ENST00000562173 MZF1P28698 734 aaPredicted RBP8.51□□□□□ -1.05
UBR1-203ENST00000562173 MAP2K3P46734 347 aa8.51□□□□□ -1.05
UBR1-203ENST00000562173 ARHGAP4P98171 946 aa8.51□□□□□ -1.05
UBR1-203ENST00000562173 KCNMA1Q12791 1236 aa8.51□□□□□ -1.05
UBR1-203ENST00000562173 FAM26DQ5JW98 314 aa8.51□□□□□ -1.05
UBR1-203ENST00000562173 GLI3P10071 1580 aa8.51□□□□□ -1.05
UBR1-203ENST00000562173 OPLAHO14841 1288 aa8.5□□□□□ -1.05
UBR1-203ENST00000562173 EGFRP00533 1210 aa8.5□□□□□ -1.05
UBR1-203ENST00000562173 CELA2BP08218 269 aaPredicted RBP8.5□□□□□ -1.05
UBR1-203ENST00000562173 NEUROD1Q13562 356 aa8.5□□□□□ -1.05
UBR1-203ENST00000562173 CITED4Q96RK1 184 aa8.5□□□□□ -1.05
UBR1-203ENST00000562173 ANO2Q9NQ90 1003 aa8.5□□□□□ -1.05
UBR1-203ENST00000562173 RTCBQ9Y3I0 505 aaKnown RBP8.5□□□□□ -1.05
UBR1-203ENST00000562173 METP08581 1390 aa8.49□□□□□ -1.05
UBR1-203ENST00000562173 SETD5Q9C0A6 1442 aa8.49□□□□□ -1.05
UBR1-203ENST00000562173 RGPD8O14715 1765 aaPredicted RBP8.49□□□□□ -1.05
UBR1-203ENST00000562173 ZBTB39O15060 712 aa8.49□□□□□ -1.05
UBR1-203ENST00000562173 NDUFB5O43674 189 aa8.49□□□□□ -1.05
UBR1-203ENST00000562173 CD33P20138 364 aa8.49□□□□□ -1.05
UBR1-203ENST00000562173 XPCQ01831 940 aaPredicted RBP8.49□□□□□ -1.05
UBR1-203ENST00000562173 ECM1Q16610 540 aa8.49□□□□□ -1.05
UBR1-203ENST00000562173 ORAI2Q96SN7 254 aa8.49□□□□□ -1.05
UBR1-203ENST00000562173 FNDC3AQ9Y2H6 1198 aaKnown RBP8.49□□□□□ -1.05
UBR1-203ENST00000562173 AMOTL2Q9Y2J4 779 aa8.49□□□□□ -1.05
UBR1-203ENST00000562173 BMP4P12644 408 aa8.48□□□□□ -1.05
UBR1-203ENST00000562173 RBM6P78332 1123 aaKnown RBP8.48□□□□□ -1.05
UBR1-203ENST00000562173 EHHADHQ08426 723 aa8.48□□□□□ -1.05
UBR1-203ENST00000562173 SPEM2Q0P670 501 aa8.48□□□□□ -1.05
UBR1-203ENST00000562173 ZNF468Q5VIY5 522 aaPredicted RBP8.48□□□□□ -1.05
UBR1-203ENST00000562173 RGL4Q8IZJ4 473 aa8.48□□□□□ -1.05
UBR1-203ENST00000562173 STRN4Q9NRL3 753 aa8.48□□□□□ -1.05
UBR1-203ENST00000562173 ATRNO75882 1429 aa8.47□□□□□ -1.05
UBR1-203ENST00000562173 FZD6O60353 706 aa8.47□□□□□ -1.05
UBR1-203ENST00000562173 PDGFAP04085 211 aa8.47□□□□□ -1.05
UBR1-203ENST00000562173 ARAFP10398 606 aa8.47□□□□□ -1.05
UBR1-203ENST00000562173 ATF3P18847 181 aa8.47□□□□□ -1.05
UBR1-203ENST00000562173 GRNP28799 593 aaKnown RBP8.47□□□□□ -1.05
UBR1-203ENST00000562173 SFSWAPQ12872 951 aaKnown RBP8.47□□□□□ -1.05
UBR1-203ENST00000562173 PDE12Q6L8Q7 609 aaKnown RBP8.47□□□□□ -1.05
UBR1-203ENST00000562173 GJD3Q8N144 294 aa8.47□□□□□ -1.05
UBR1-203ENST00000562173 BIN2Q9UBW5 565 aaPredicted RBP8.47□□□□□ -1.05
UBR1-203ENST00000562173 HCN2Q9UL51 889 aa8.47□□□□□ -1.05
UBR1-203ENST00000562173 VPS8Q8N3P4 1428 aa8.46□□□□□ -1.05
UBR1-203ENST00000562173 CCINQ13939 588 aa8.46□□□□□ -1.06
UBR1-203ENST00000562173 ATCAYQ86WG3 371 aa8.46□□□□□ -1.06
UBR1-203ENST00000562173 GPR152Q8TDT2 470 aa8.46□□□□□ -1.06
UBR1-203ENST00000562173 EDEM1Q92611 657 aa8.46□□□□□ -1.06
UBR1-203ENST00000562173 ACDQ96AP0 544 aa8.46□□□□□ -1.06
UBR1-203ENST00000562173 DCTN4Q9UJW0 460 aa8.46□□□□□ -1.06
UBR1-203ENST00000562173 BRPF3Q9ULD4 1205 aa8.46□□□□□ -1.06
UBR1-203ENST00000562173 KCNMB2Q9Y691 235 aa8.46□□□□□ -1.06
UBR1-203ENST00000562173 BCL9LQ86UU0 1499 aa8.45□□□□□ -1.06
UBR1-203ENST00000562173 XYLBO75191 536 aa8.45□□□□□ -1.06
UBR1-203ENST00000562173 MAP3K6O95382 1288 aa8.45□□□□□ -1.06
UBR1-203ENST00000562173 ADH6P28332 368 aa8.45□□□□□ -1.06
UBR1-203ENST00000562173 PDE3BQ13370 1112 aa8.45□□□□□ -1.06
UBR1-203ENST00000562173 AAMPQ13685 434 aa8.45□□□□□ -1.06
UBR1-203ENST00000562173 TRIP4Q15650 581 aaPredicted RBP8.45□□□□□ -1.06
UBR1-203ENST00000562173 SLCO4C1Q6ZQN7 724 aa8.45□□□□□ -1.06
UBR1-203ENST00000562173 NUDT16Q96DE0 195 aaKnown RBP8.45□□□□□ -1.06
UBR1-203ENST00000562173 RBCK1Q9BYM8 510 aa8.45□□□□□ -1.06
UBR1-203ENST00000562173 GSX2Q9BZM3 304 aa8.45□□□□□ -1.06
UBR1-203ENST00000562173 C19orf44Q9H6X5 657 aa8.45□□□□□ -1.06
UBR1-203ENST00000562173 LRRC4BQ9NT99 713 aa8.45□□□□□ -1.06
UBR1-203ENST00000562173 GDF2Q9UK05 429 aaPredicted RBP8.45□□□□□ -1.06
UBR1-203ENST00000562173 USP21Q9UK80 565 aa8.45□□□□□ -1.06
UBR1-203ENST00000562173 TBX22Q9Y458 520 aa8.45□□□□□ -1.06
UBR1-203ENST00000562173 LRP5O75197 1615 aa8.44□□□□□ -1.06
UBR1-203ENST00000562173 LAMC1P11047 1609 aa8.44□□□□□ -1.06
UBR1-203ENST00000562173 CLTCL1P53675 1640 aa8.44□□□□□ -1.06
UBR1-203ENST00000562173 COL22A1Q8NFW1 1626 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms