RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 RAD17O75943 681 aa12.61□□□□□ -0.39
LRRC28-221ENST00000561276 NUCB1Q02818 461 aa12.61□□□□□ -0.39
LRRC28-221ENST00000561276 CCDC158Q5M9N0 1113 aa12.61□□□□□ -0.39
LRRC28-221ENST00000561276 TTLL5Q6EMB2 1281 aa12.61□□□□□ -0.39
LRRC28-221ENST00000561276 DPY19L2Q6NUT2 758 aa12.61□□□□□ -0.39
LRRC28-221ENST00000561276 GNL3LQ9NVN8 582 aaKnown RBP12.61□□□□□ -0.39
LRRC28-221ENST00000561276 USP17L3A6NCW0 530 aa12.6□□□□□ -0.39
LRRC28-221ENST00000561276 USP17L4A6NCW7 530 aa12.6□□□□□ -0.39
LRRC28-221ENST00000561276 GTF2IP78347 998 aa12.6□□□□□ -0.39
LRRC28-221ENST00000561276 TTC39AQ5SRH9 613 aa12.6□□□□□ -0.39
LRRC28-221ENST00000561276 CIAPIN1Q6FI81 312 aa12.6□□□□□ -0.39
LRRC28-221ENST00000561276 USP17L1Q7RTZ2 530 aa12.6□□□□□ -0.39
LRRC28-221ENST00000561276 CHD1LQ86WJ1 897 aa12.6□□□□□ -0.39
LRRC28-221ENST00000561276 LNPKQ9C0E8 428 aa12.6□□□□□ -0.39
LRRC28-221ENST00000561276 AKAP11Q9UKA4 1901 aa12.6□□□□□ -0.39
LRRC28-221ENST00000561276 ZC3H4Q9UPT8 1303 aaKnown RBP12.6□□□□□ -0.39
LRRC28-221ENST00000561276 PSMD14O00487 310 aa12.59□□□□□ -0.39
LRRC28-221ENST00000561276 DDNO94850 711 aaPredicted RBP12.59□□□□□ -0.39
LRRC28-221ENST00000561276 UQCRFS1P1P0C7P4 283 aa12.59□□□□□ -0.39
LRRC28-221ENST00000561276 TNIP1Q15025 636 aa12.59□□□□□ -0.39
LRRC28-221ENST00000561276 FBXW7Q969H0 707 aa12.59□□□□□ -0.39
LRRC28-221ENST00000561276 GJA3Q9Y6H8 435 aa12.59□□□□□ -0.39
LRRC28-221ENST00000561276 UTRNP46939 3433 aa12.59□□□□□ -0.39
LRRC28-221ENST00000561276 KDM2BQ8NHM5 1336 aa12.59□□□□□ -0.39
LRRC28-221ENST00000561276 ZNF541Q9H0D2 1346 aa12.59□□□□□ -0.39
LRRC28-221ENST00000561276 GLTPD2A6NH11 291 aa12.58□□□□□ -0.4
LRRC28-221ENST00000561276 VIL1P09327 827 aaKnown RBP12.58□□□□□ -0.4
LRRC28-221ENST00000561276 ARID4AP29374 1257 aaPredicted RBP12.58□□□□□ -0.4
LRRC28-221ENST00000561276 CHAF1AQ13111 956 aaPredicted RBP12.58□□□□□ -0.4
LRRC28-221ENST00000561276 STRIP1Q5VSL9 837 aa12.58□□□□□ -0.4
LRRC28-221ENST00000561276 CENPQQ7L2Z9 268 aaPredicted RBP12.58□□□□□ -0.4
LRRC28-221ENST00000561276 GPC2Q8N158 579 aa12.58□□□□□ -0.4
LRRC28-221ENST00000561276 DENND2AQ9ULE3 1009 aa12.58□□□□□ -0.4
LRRC28-221ENST00000561276 JAG2Q9Y219 1238 aa12.58□□□□□ -0.4
LRRC28-221ENST00000561276 MYO5AQ9Y4I1 1855 aaKnown RBP12.58□□□□□ -0.4
LRRC28-221ENST00000561276 SEMA3EO15041 775 aa12.57□□□□□ -0.4
LRRC28-221ENST00000561276 MCAMP43121 646 aa12.57□□□□□ -0.4
LRRC28-221ENST00000561276 SCARF1Q14162 830 aa12.57□□□□□ -0.4
LRRC28-221ENST00000561276 DACT2Q5SW24 774 aa12.57□□□□□ -0.4
LRRC28-221ENST00000561276 OTUD7AQ8TE49 926 aaPredicted RBP12.57□□□□□ -0.4
LRRC28-221ENST00000561276 ZNF512BQ96KM6 892 aaPredicted RBP12.57□□□□□ -0.4
LRRC28-221ENST00000561276 MXD3Q9BW11 206 aa12.57□□□□□ -0.4
LRRC28-221ENST00000561276 SNRKQ9NRH2 765 aa12.57□□□□□ -0.4
LRRC28-221ENST00000561276 ECHDC1Q9NTX5 307 aa12.57□□□□□ -0.4
LRRC28-221ENST00000561276 HMG20BQ9P0W2 317 aa12.57□□□□□ -0.4
LRRC28-221ENST00000561276 FAM205AQ6ZU69 1335 aa12.57□□□□□ -0.4
LRRC28-221ENST00000561276 ATP5JP18859 108 aa12.56□□□□□ -0.4
LRRC28-221ENST00000561276 MX1P20591 662 aa12.56□□□□□ -0.4
LRRC28-221ENST00000561276 RASGRF1Q13972 1273 aa12.56□□□□□ -0.4
LRRC28-221ENST00000561276 RSBN1LQ6PCB5 846 aaPredicted RBP12.56□□□□□ -0.4
LRRC28-221ENST00000561276 PI16Q6UXB8 463 aa12.56□□□□□ -0.4
LRRC28-221ENST00000561276 SPATA5Q8NB90 893 aa12.56□□□□□ -0.4
LRRC28-221ENST00000561276 WDR66Q8TBY9 1149 aa12.56□□□□□ -0.4
LRRC28-221ENST00000561276 FKBP1AP62942 108 aaKnown RBP12.55□□□□□ -0.4
LRRC28-221ENST00000561276 MFSD14BQ5SR56 506 aa12.55□□□□□ -0.4
LRRC28-221ENST00000561276 CERS5Q8N5B7 392 aa12.55□□□□□ -0.4
LRRC28-221ENST00000561276 AGBL3Q8NEM8 1001 aa12.55□□□□□ -0.4
LRRC28-221ENST00000561276 GPATCH3Q96I76 525 aa12.55□□□□□ -0.4
LRRC28-221ENST00000561276 NDUFB9Q9Y6M9 179 aa12.55□□□□□ -0.4
LRRC28-221ENST00000561276 TTC41PQ6P2S7 1318 aa12.55□□□□□ -0.4
LRRC28-221ENST00000561276 SALL3Q9BXA9 1300 aa12.55□□□□□ -0.4
LRRC28-221ENST00000561276 COL1A1P02452 1464 aaPredicted RBP12.54□□□□□ -0.4
LRRC28-221ENST00000561276 SCN4AP35499 1836 aa12.54□□□□□ -0.4
LRRC28-221ENST00000561276 CYP2E1P05181 493 aaPredicted RBP12.54□□□□□ -0.4
LRRC28-221ENST00000561276 RPS12P25398 132 aaKnown RBP12.54□□□□□ -0.4
LRRC28-221ENST00000561276 YY1P25490 414 aa12.54□□□□□ -0.4
LRRC28-221ENST00000561276 PDE4AP27815 886 aa12.54□□□□□ -0.4
LRRC28-221ENST00000561276 ZAP70P43403 619 aa12.54□□□□□ -0.4
LRRC28-221ENST00000561276 GMPSP49915 693 aaPredicted RBP12.54□□□□□ -0.4
LRRC28-221ENST00000561276 PDE1AP54750 535 aa12.54□□□□□ -0.4
LRRC28-221ENST00000561276 TSHZ3Q63HK5 1081 aa12.54□□□□□ -0.4
LRRC28-221ENST00000561276 TBC1D9Q6ZT07 1266 aa12.54□□□□□ -0.4
LRRC28-221ENST00000561276 PLEKHM2Q8IWE5 1019 aa12.54□□□□□ -0.4
LRRC28-221ENST00000561276 ZNF526Q8TF50 670 aaPredicted RBP12.54□□□□□ -0.4
LRRC28-221ENST00000561276 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.54□□□□□ -0.4
LRRC28-221ENST00000561276 TBC1D22AQ8WUA7 517 aa12.54□□□□□ -0.4
LRRC28-221ENST00000561276 DPF2Q92785 391 aa12.54□□□□□ -0.4
LRRC28-221ENST00000561276 GMLQ99445 158 aa12.54□□□□□ -0.4
LRRC28-221ENST00000561276 BOLA2Q9H3K6 86 aa12.54□□□□□ -0.4
LRRC28-221ENST00000561276 STAP2Q9UGK3 403 aa12.54□□□□□ -0.4
LRRC28-221ENST00000561276 CNOT7Q9UIV1 285 aaKnown RBP12.54□□□□□ -0.4
LRRC28-221ENST00000561276 PDS5AQ29RF7 1337 aaKnown RBP12.54□□□□□ -0.4
LRRC28-221ENST00000561276 MYO3BQ8WXR4 1341 aa12.54□□□□□ -0.4
LRRC28-221ENST00000561276 WDR90Q96KV7 1748 aa12.54□□□□□ -0.4
LRRC28-221ENST00000561276 F8W031 263 aaPredicted RBP12.53□□□□□ -0.4
LRRC28-221ENST00000561276 SCNN1DP51172 638 aa12.53□□□□□ -0.4
LRRC28-221ENST00000561276 GRIK5Q16478 980 aa12.53□□□□□ -0.4
LRRC28-221ENST00000561276 KIAA0825Q8IV33 1275 aa12.53□□□□□ -0.4
LRRC28-221ENST00000561276 ZGPATQ8N5A5 531 aaKnown RBP12.53□□□□□ -0.4
LRRC28-221ENST00000561276 RRAGCQ9HB90 399 aa12.53□□□□□ -0.4
LRRC28-221ENST00000561276 ABCF2Q9UG63 623 aa12.53□□□□□ -0.4
LRRC28-221ENST00000561276 GTF3C3Q9Y5Q9 886 aa12.53□□□□□ -0.4
LRRC28-221ENST00000561276 SALL1Q9NSC2 1324 aa12.53□□□□□ -0.4
LRRC28-221ENST00000561276 POTECB2RU33 542 aa12.52□□□□□ -0.41
LRRC28-221ENST00000561276 ERC2O15083 957 aa12.52□□□□□ -0.41
LRRC28-221ENST00000561276 LDHBP07195 334 aaKnown RBP12.52□□□□□ -0.41
LRRC28-221ENST00000561276 USP17L8P0C7I0 530 aa12.52□□□□□ -0.41
LRRC28-221ENST00000561276 EPS15P42566 896 aa12.52□□□□□ -0.41
LRRC28-221ENST00000561276 SPTY2D1Q68D10 685 aaPredicted RBP12.52□□□□□ -0.41
LRRC28-221ENST00000561276 REM2Q8IYK8 340 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms