RNA–Protein interactions for RNA: ENST00000561116.5

FAM227B-213, Transcript of family with sequence similarity 227 member B, humanhuman

TSL 3

Gene FAM227B, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM227B-213ENST00000561116 DOC2BQ14184 412 aa6.34□□□□□ -1.39
FAM227B-213ENST00000561116 PERM1Q5SV97 790 aa6.34□□□□□ -1.39
FAM227B-213ENST00000561116 PSAPL1Q6NUJ1 521 aa6.34□□□□□ -1.39
FAM227B-213ENST00000561116 PRPF40BQ6NWY9 871 aaKnown RBP6.34□□□□□ -1.39
FAM227B-213ENST00000561116 FCHSD1Q86WN1 690 aa6.34□□□□□ -1.39
FAM227B-213ENST00000561116 DDX54Q8TDD1 881 aaKnown RBP6.34□□□□□ -1.39
FAM227B-213ENST00000561116 BSNDQ8WZ55 320 aa6.34□□□□□ -1.39
FAM227B-213ENST00000561116 TTC9Q92623 222 aa6.34□□□□□ -1.39
FAM227B-213ENST00000561116 PLVAPQ9BX97 442 aa6.34□□□□□ -1.39
FAM227B-213ENST00000561116 KRTAP9-2Q9BYQ4 174 aa6.34□□□□□ -1.39
FAM227B-213ENST00000561116 CEP44Q9C0F1 390 aa6.34□□□□□ -1.39
FAM227B-213ENST00000561116 PPM1HQ9ULR3 514 aa6.34□□□□□ -1.39
FAM227B-213ENST00000561116 TTF2Q9UNY4 1162 aaKnown RBP6.34□□□□□ -1.39
FAM227B-213ENST00000561116 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.34□□□□□ -1.39
FAM227B-213ENST00000561116 USP31Q70CQ4 1352 aa6.33□□□□□ -1.4
FAM227B-213ENST00000561116 A0A096LPE4 126 aa6.33□□□□□ -1.4
FAM227B-213ENST00000561116 A0A1W2PPZ6 126 aa6.33□□□□□ -1.4
FAM227B-213ENST00000561116 SPDYE3A6NKU9 549 aa6.33□□□□□ -1.4
FAM227B-213ENST00000561116 LILRB5O75023 590 aa6.33□□□□□ -1.4
FAM227B-213ENST00000561116 RECKO95980 971 aa6.33□□□□□ -1.4
FAM227B-213ENST00000561116 CHRNA4P43681 627 aa6.33□□□□□ -1.4
FAM227B-213ENST00000561116 GATA4P43694 442 aa6.33□□□□□ -1.4
FAM227B-213ENST00000561116 ST13P50502 369 aaKnown RBP6.33□□□□□ -1.4
FAM227B-213ENST00000561116 ATP11AP98196 1134 aa6.33□□□□□ -1.4
FAM227B-213ENST00000561116 PTPN12Q05209 780 aaKnown RBP6.33□□□□□ -1.4
FAM227B-213ENST00000561116 TCF12Q99081 682 aa6.33□□□□□ -1.4
FAM227B-213ENST00000561116 POP1Q99575 1024 aaKnown RBP6.33□□□□□ -1.4
FAM227B-213ENST00000561116 BHLHE41Q9C0J9 482 aaPredicted RBP6.33□□□□□ -1.4
FAM227B-213ENST00000561116 MUC3BQ9H195 1237 aa6.33□□□□□ -1.4
FAM227B-213ENST00000561116 KRTAP9-6A0A140TA67 174 aa6.32□□□□□ -1.4
FAM227B-213ENST00000561116 NFKBIEO00221 500 aa6.32□□□□□ -1.4
FAM227B-213ENST00000561116 TRPA1O75762 1119 aa6.32□□□□□ -1.4
FAM227B-213ENST00000561116 RLBP1P12271 317 aa6.32□□□□□ -1.4
FAM227B-213ENST00000561116 PPP2R3AQ06190 1150 aa6.32□□□□□ -1.4
FAM227B-213ENST00000561116 GDF6Q6KF10 455 aaPredicted RBP6.32□□□□□ -1.4
FAM227B-213ENST00000561116 FAM117BQ6P1L5 589 aa6.32□□□□□ -1.4
FAM227B-213ENST00000561116 HS2ST1Q7LGA3 356 aa6.32□□□□□ -1.4
FAM227B-213ENST00000561116 GLIS3Q8NEA6 775 aa6.32□□□□□ -1.4
FAM227B-213ENST00000561116 NUDT8Q8WV74 236 aa6.32□□□□□ -1.4
FAM227B-213ENST00000561116 JPH1Q9HDC5 661 aaPredicted RBP6.32□□□□□ -1.4
FAM227B-213ENST00000561116 ACPPP15309 386 aa6.31□□□□□ -1.4
FAM227B-213ENST00000561116 CDC27P30260 824 aa6.31□□□□□ -1.4
FAM227B-213ENST00000561116 GRIA4P48058 902 aa6.31□□□□□ -1.4
FAM227B-213ENST00000561116 ARL4DP49703 201 aa6.31□□□□□ -1.4
FAM227B-213ENST00000561116 PRRT3Q5FWE3 981 aa6.31□□□□□ -1.4
FAM227B-213ENST00000561116 RPS26P11Q5JNZ5 115 aaPredicted RBP6.31□□□□□ -1.4
FAM227B-213ENST00000561116 DIEXFQ68CQ4 756 aaKnown RBP6.31□□□□□ -1.4
FAM227B-213ENST00000561116 KRTAP1-3Q8IUG1 177 aa6.31□□□□□ -1.4
FAM227B-213ENST00000561116 LACRTQ9GZZ8 138 aa6.31□□□□□ -1.4
FAM227B-213ENST00000561116 ABCB6Q9NP58 842 aa6.31□□□□□ -1.4
FAM227B-213ENST00000561116 SAMM50Q9Y512 469 aa6.31□□□□□ -1.4
FAM227B-213ENST00000561116 APBA3O96018 575 aa6.3□□□□□ -1.4
FAM227B-213ENST00000561116 CTSHP09668 335 aa6.3□□□□□ -1.4
FAM227B-213ENST00000561116 SPATA31C1P0DKV0 1188 aa6.3□□□□□ -1.4
FAM227B-213ENST00000561116 ITPKAP23677 461 aa6.3□□□□□ -1.4
FAM227B-213ENST00000561116 ERCC5P28715 1186 aaPredicted RBP6.3□□□□□ -1.4
FAM227B-213ENST00000561116 PWP1Q13610 501 aa6.3□□□□□ -1.4
FAM227B-213ENST00000561116 CCDC85BQ15834 202 aaPredicted RBP6.3□□□□□ -1.4
FAM227B-213ENST00000561116 SPRED3Q2MJR0 410 aa6.3□□□□□ -1.4
FAM227B-213ENST00000561116 RELL1Q8IUW5 271 aa6.3□□□□□ -1.4
FAM227B-213ENST00000561116 LPIN3Q9BQK8 851 aa6.3□□□□□ -1.4
FAM227B-213ENST00000561116 NOC4LQ9BVI4 516 aaKnown RBP6.3□□□□□ -1.4
FAM227B-213ENST00000561116 ADAM19Q9H013 955 aa6.3□□□□□ -1.4
FAM227B-213ENST00000561116 CLEC4MQ9H2X3 399 aaPredicted RBP6.3□□□□□ -1.4
FAM227B-213ENST00000561116 GGT7Q9UJ14 662 aa6.3□□□□□ -1.4
FAM227B-213ENST00000561116 METTL12A8MUP2 240 aa6.29□□□□□ -1.4
FAM227B-213ENST00000561116 M0R082 166 aa6.29□□□□□ -1.4
FAM227B-213ENST00000561116 MEI1Q5TIA1 1274 aa6.29□□□□□ -1.4
FAM227B-213ENST00000561116 SV2BQ7L1I2 683 aa6.29□□□□□ -1.4
FAM227B-213ENST00000561116 IL22RA1Q8N6P7 574 aa6.29□□□□□ -1.4
FAM227B-213ENST00000561116 ZNF417Q8TAU3 575 aa6.29□□□□□ -1.4
FAM227B-213ENST00000561116 ANKRD24Q8TF21 1146 aa6.29□□□□□ -1.4
FAM227B-213ENST00000561116 HHIPQ96QV1 700 aa6.29□□□□□ -1.4
FAM227B-213ENST00000561116 ZNF587Q96SQ5 575 aaPredicted RBP6.29□□□□□ -1.4
FAM227B-213ENST00000561116 TMEM39AQ9NV64 488 aa6.29□□□□□ -1.4
FAM227B-213ENST00000561116 GPN3Q9UHW5 284 aaPredicted RBP6.29□□□□□ -1.4
FAM227B-213ENST00000561116 TRIM33Q9UPN9 1127 aa6.29□□□□□ -1.4
FAM227B-213ENST00000561116 PPME1Q9Y570 386 aa6.29□□□□□ -1.4
FAM227B-213ENST00000561116 LMNB1P20700 586 aa6.28□□□□□ -1.4
FAM227B-213ENST00000561116 FANCCQ00597 558 aa6.28□□□□□ -1.4
FAM227B-213ENST00000561116 IKBKEQ14164 716 aa6.28□□□□□ -1.4
FAM227B-213ENST00000561116 ZMYM1Q5SVZ6 1142 aa6.28□□□□□ -1.4
FAM227B-213ENST00000561116 C9orf131Q5VYM1 1079 aa6.28□□□□□ -1.4
FAM227B-213ENST00000561116 TPTE2Q6XPS3 522 aa6.28□□□□□ -1.4
FAM227B-213ENST00000561116 NT5DC4Q86YG4 428 aa6.28□□□□□ -1.4
FAM227B-213ENST00000561116 WFDC8Q8IUA0 241 aa6.28□□□□□ -1.4
FAM227B-213ENST00000561116 C3orf58Q8NDZ4 430 aa6.28□□□□□ -1.4
FAM227B-213ENST00000561116 TRIM11Q96F44 468 aa6.28□□□□□ -1.4
FAM227B-213ENST00000561116 MDFIQ99750 246 aa6.28□□□□□ -1.4
FAM227B-213ENST00000561116 IGSF5Q9NSI5 407 aa6.28□□□□□ -1.4
FAM227B-213ENST00000561116 NAGPAQ9UK23 515 aa6.28□□□□□ -1.4
FAM227B-213ENST00000561116 HDLBPQ00341 1268 aaKnown RBP6.27□□□□□ -1.41
FAM227B-213ENST00000561116 HNRNPUQ00839 825 aaKnown RBP eCLIP6.27□□□□□ -1.41
FAM227B-213ENST00000561116 PCDH1Q08174 1060 aa6.27□□□□□ -1.41
FAM227B-213ENST00000561116 TRIM28Q13263 835 aaKnown RBP6.27□□□□□ -1.41
FAM227B-213ENST00000561116 GNL2Q13823 731 aaKnown RBP6.27□□□□□ -1.41
FAM227B-213ENST00000561116 C20orf204Q6ZNR8 217 aa6.27□□□□□ -1.41
FAM227B-213ENST00000561116 DCAF11Q8TEB1 546 aa6.27□□□□□ -1.41
FAM227B-213ENST00000561116 ZNF576Q9H609 170 aa6.27□□□□□ -1.41
FAM227B-213ENST00000561116 SEC31BQ9NQW1 1179 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms