RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 C6orf229H3BNL8 230 aa8.4□□□□□ -1.06
USP8-213ENST00000560885 ECE2O60344 883 aa8.4□□□□□ -1.06
USP8-213ENST00000560885 SLC10A3P09131 477 aa8.4□□□□□ -1.06
USP8-213ENST00000560885 RIPK4P57078 832 aa8.4□□□□□ -1.06
USP8-213ENST00000560885 LMOD3Q0VAK6 560 aa8.4□□□□□ -1.06
USP8-213ENST00000560885 PROX2Q3B8N5 592 aa8.4□□□□□ -1.06
USP8-213ENST00000560885 SULF1Q8IWU6 871 aa8.4□□□□□ -1.06
USP8-213ENST00000560885 CSRNP1Q96S65 589 aa8.4□□□□□ -1.06
USP8-213ENST00000560885 POLLQ9UGP5 575 aa8.4□□□□□ -1.06
USP8-213ENST00000560885 PAPPA2Q9BXP8 1791 aa8.4□□□□□ -1.07
USP8-213ENST00000560885 COL4A1P02462 1669 aa8.4□□□□□ -1.07
USP8-213ENST00000560885 RTL9Q8NET4 1388 aa8.39□□□□□ -1.07
USP8-213ENST00000560885 VIL1P09327 827 aaKnown RBP8.39□□□□□ -1.07
USP8-213ENST00000560885 FKBP1BP68106 108 aa8.39□□□□□ -1.07
USP8-213ENST00000560885 MAP3K9P80192 1104 aa8.39□□□□□ -1.07
USP8-213ENST00000560885 KIF4BQ2VIQ3 1234 aa8.39□□□□□ -1.07
USP8-213ENST00000560885 RBM26Q5T8P6 1007 aaKnown RBP8.39□□□□□ -1.07
USP8-213ENST00000560885 TYW1BQ6NUM6 668 aa8.39□□□□□ -1.07
USP8-213ENST00000560885 CTU1Q7Z7A3 348 aaKnown RBP8.39□□□□□ -1.07
USP8-213ENST00000560885 PLBD2Q8NHP8 589 aa8.39□□□□□ -1.07
USP8-213ENST00000560885 NECTIN2Q92692 538 aa8.39□□□□□ -1.07
USP8-213ENST00000560885 CELF1Q92879 486 aaKnown RBP8.39□□□□□ -1.07
USP8-213ENST00000560885 FAM89AQ96GI7 184 aa8.39□□□□□ -1.07
USP8-213ENST00000560885 ZC3H12CQ9C0D7 883 aaKnown RBP8.39□□□□□ -1.07
USP8-213ENST00000560885 KCNQ5Q9NR82 932 aa8.39□□□□□ -1.07
USP8-213ENST00000560885 PODXL2Q9NZ53 605 aa8.39□□□□□ -1.07
USP8-213ENST00000560885 PCDHGA10Q9Y5H3 936 aa8.39□□□□□ -1.07
USP8-213ENST00000560885 CENPFP49454 3210 aa8.39□□□□□ -1.07
USP8-213ENST00000560885 HTTP42858 3142 aa8.38□□□□□ -1.07
USP8-213ENST00000560885 NRG2O14511 850 aaPredicted RBP8.38□□□□□ -1.07
USP8-213ENST00000560885 TMPOP42166 694 aaKnown RBP8.38□□□□□ -1.07
USP8-213ENST00000560885 SOX10P56693 466 aa8.38□□□□□ -1.07
USP8-213ENST00000560885 RPS8P62241 208 aaKnown RBP8.38□□□□□ -1.07
USP8-213ENST00000560885 GPSM2P81274 684 aa8.38□□□□□ -1.07
USP8-213ENST00000560885 TRIM28Q13263 835 aaKnown RBP8.38□□□□□ -1.07
USP8-213ENST00000560885 PKN2Q16513 984 aaKnown RBP8.38□□□□□ -1.07
USP8-213ENST00000560885 PRPF38BQ5VTL8 546 aaKnown RBP8.38□□□□□ -1.07
USP8-213ENST00000560885 TBC1D16Q8TBP0 767 aa8.38□□□□□ -1.07
USP8-213ENST00000560885 CDCA5Q96FF9 252 aa8.38□□□□□ -1.07
USP8-213ENST00000560885 ISCA1Q9BUE6 129 aa8.38□□□□□ -1.07
USP8-213ENST00000560885 GGA3Q9NZ52 723 aa8.38□□□□□ -1.07
USP8-213ENST00000560885 CHPF2Q9P2E5 772 aa8.38□□□□□ -1.07
USP8-213ENST00000560885 DBF4Q9UBU7 674 aaPredicted RBP8.38□□□□□ -1.07
USP8-213ENST00000560885 TSR3Q9UJK0 312 aaKnown RBP8.38□□□□□ -1.07
USP8-213ENST00000560885 MYH3P11055 1940 aa8.38□□□□□ -1.07
USP8-213ENST00000560885 ZNF646O15015 1829 aaPredicted RBP8.38□□□□□ -1.07
USP8-213ENST00000560885 PITPNM2Q9BZ72 1349 aa8.37□□□□□ -1.07
USP8-213ENST00000560885 CHL1O00533 1208 aa8.37□□□□□ -1.07
USP8-213ENST00000560885 GFRA3O60609 400 aa8.37□□□□□ -1.07
USP8-213ENST00000560885 HOXB7P09629 217 aa8.37□□□□□ -1.07
USP8-213ENST00000560885 HSP90B1P14625 803 aaKnown RBP8.37□□□□□ -1.07
USP8-213ENST00000560885 COL9A1P20849 921 aa8.37□□□□□ -1.07
USP8-213ENST00000560885 ZNF280AP59817 542 aaPredicted RBP8.37□□□□□ -1.07
USP8-213ENST00000560885 HDGFL1Q5TGJ6 251 aa8.37□□□□□ -1.07
USP8-213ENST00000560885 RASAL3Q86YV0 1011 aa8.37□□□□□ -1.07
USP8-213ENST00000560885 AGBL3Q8NEM8 1001 aa8.37□□□□□ -1.07
USP8-213ENST00000560885 DDX27Q96GQ7 796 aaKnown RBP8.37□□□□□ -1.07
USP8-213ENST00000560885 HYPKQ9NX55 129 aa8.37□□□□□ -1.07
USP8-213ENST00000560885 SPEF2Q9C093 1822 aa8.37□□□□□ -1.07
USP8-213ENST00000560885 LAMB1P07942 1786 aa8.37□□□□□ -1.07
USP8-213ENST00000560885 ATP5J2-PTCD1G3V325 749 aa8.36□□□□□ -1.07
USP8-213ENST00000560885 IRS4O14654 1257 aaPredicted RBP8.36□□□□□ -1.07
USP8-213ENST00000560885 SCARF1Q14162 830 aa8.36□□□□□ -1.07
USP8-213ENST00000560885 MFSD10Q14728 455 aa8.36□□□□□ -1.07
USP8-213ENST00000560885 ANGEL2Q5VTE6 544 aaKnown RBP8.36□□□□□ -1.07
USP8-213ENST00000560885 RSBN1LQ6PCB5 846 aaPredicted RBP8.36□□□□□ -1.07
USP8-213ENST00000560885 ZNF428Q96B54 188 aa8.36□□□□□ -1.07
USP8-213ENST00000560885 KIAA1468Q9P260 1216 aa8.36□□□□□ -1.07
USP8-213ENST00000560885 ANKIB1Q9P2G1 1089 aa8.36□□□□□ -1.07
USP8-213ENST00000560885 HPS5Q9UPZ3 1129 aa8.36□□□□□ -1.07
USP8-213ENST00000560885 MKI67P46013 3256 aaKnown RBP8.35□□□□□ -1.07
USP8-213ENST00000560885 ASTN2O75129 1339 aaPredicted RBP8.35□□□□□ -1.07
USP8-213ENST00000560885 LCE2BO14633 110 aa8.35□□□□□ -1.07
USP8-213ENST00000560885 UFL1O94874 794 aa8.35□□□□□ -1.07
USP8-213ENST00000560885 USP17L8P0C7I0 530 aa8.35□□□□□ -1.07
USP8-213ENST00000560885 KRT24Q2M2I5 525 aa8.35□□□□□ -1.07
USP8-213ENST00000560885 NOM1Q5C9Z4 860 aaKnown RBP8.35□□□□□ -1.07
USP8-213ENST00000560885 RTL5Q5HYW3 569 aaPredicted RBP8.35□□□□□ -1.07
USP8-213ENST00000560885 ZBTB38Q8NAP3 1195 aaPredicted RBP8.35□□□□□ -1.07
USP8-213ENST00000560885 LRCH3Q96II8 777 aa8.35□□□□□ -1.07
USP8-213ENST00000560885 GMLQ99445 158 aa8.35□□□□□ -1.07
USP8-213ENST00000560885 MYOZ2Q9NPC6 264 aa8.35□□□□□ -1.07
USP8-213ENST00000560885 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.35□□□□□ -1.07
USP8-213ENST00000560885 GGA1Q9UJY5 639 aa8.35□□□□□ -1.07
USP8-213ENST00000560885 HDAC9Q9UKV0 1011 aa8.35□□□□□ -1.07
USP8-213ENST00000560885 ECM29Q5VYK3 1845 aa8.35□□□□□ -1.07
USP8-213ENST00000560885 RBBP6Q7Z6E9 1792 aaKnown RBP8.35□□□□□ -1.07
USP8-213ENST00000560885 TM4SF4P48230 202 aa8.34□□□□□ -1.07
USP8-213ENST00000560885 CCDC152Q4G0S7 254 aa8.34□□□□□ -1.07
USP8-213ENST00000560885 PODNQ7Z5L7 613 aa8.34□□□□□ -1.07
USP8-213ENST00000560885 ZNF296Q8WUU4 475 aaPredicted RBP8.34□□□□□ -1.07
USP8-213ENST00000560885 EPAS1Q99814 870 aa8.34□□□□□ -1.07
USP8-213ENST00000560885 SEC31BQ9NQW1 1179 aa8.34□□□□□ -1.07
USP8-213ENST00000560885 LAS1LQ9Y4W2 734 aaKnown RBP8.34□□□□□ -1.07
USP8-213ENST00000560885 XDHP47989 1333 aa8.33□□□□□ -1.08
USP8-213ENST00000560885 USP17L3A6NCW0 530 aa8.33□□□□□ -1.08
USP8-213ENST00000560885 USP17L4A6NCW7 530 aa8.33□□□□□ -1.08
USP8-213ENST00000560885 PDE8AO60658 829 aa8.33□□□□□ -1.08
USP8-213ENST00000560885 TBC1D8O95759 1140 aa8.33□□□□□ -1.08
USP8-213ENST00000560885 MMP14P50281 582 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms