RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 H0YGN5 161 aa16.54■□□□□ 0.24
RABGGTA-213ENST00000560127 USP2O75604 605 aaPredicted RBP16.54■□□□□ 0.24
RABGGTA-213ENST00000560127 IGKV5-2P06315 115 aa16.54■□□□□ 0.24
RABGGTA-213ENST00000560127 ZNF853P0CG23 659 aa16.54■□□□□ 0.24
RABGGTA-213ENST00000560127 SUPT20HL1Q3ZLR7 823 aa16.54■□□□□ 0.24
RABGGTA-213ENST00000560127 RUNDC1Q96C34 613 aa16.54■□□□□ 0.24
RABGGTA-213ENST00000560127 PTCH2Q9Y6C5 1203 aa16.54■□□□□ 0.24
RABGGTA-213ENST00000560127 CLRN2A0PK11 232 aa16.53■□□□□ 0.24
RABGGTA-213ENST00000560127 ELL2O00472 640 aaPredicted RBP16.53■□□□□ 0.24
RABGGTA-213ENST00000560127 IREB2P48200 963 aaKnown RBP16.53■□□□□ 0.24
RABGGTA-213ENST00000560127 SLC9C1Q4G0N8 1177 aa16.53■□□□□ 0.24
RABGGTA-213ENST00000560127 CD209Q9NNX6 404 aa16.53■□□□□ 0.24
RABGGTA-213ENST00000560127 MAP3K2Q9Y2U5 619 aa16.53■□□□□ 0.24
RABGGTA-213ENST00000560127 DDX58O95786 925 aaKnown RBP16.52■□□□□ 0.24
RABGGTA-213ENST00000560127 IGHMBP2P38935 993 aaKnown RBP16.52■□□□□ 0.24
RABGGTA-213ENST00000560127 NBPF11Q86T75 865 aa16.52■□□□□ 0.24
RABGGTA-213ENST00000560127 ANKRD13AQ8IZ07 590 aa16.52■□□□□ 0.24
RABGGTA-213ENST00000560127 MS4A4AQ96JQ5 239 aa16.52■□□□□ 0.24
RABGGTA-213ENST00000560127 PRMT6Q96LA8 375 aaPredicted RBP16.52■□□□□ 0.24
RABGGTA-213ENST00000560127 IRS2Q9Y4H2 1338 aa16.51■□□□□ 0.23
RABGGTA-213ENST00000560127 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
RABGGTA-213ENST00000560127 MYCP01106 439 aaPredicted RBP16.51■□□□□ 0.23
RABGGTA-213ENST00000560127 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
RABGGTA-213ENST00000560127 SLC4A8Q2Y0W8 1093 aa16.51■□□□□ 0.23
RABGGTA-213ENST00000560127 CFAP100Q494V2 611 aa16.51■□□□□ 0.23
RABGGTA-213ENST00000560127 ANKRD2Q9GZV1 360 aa16.51■□□□□ 0.23
RABGGTA-213ENST00000560127 F8W031 263 aaPredicted RBP16.5■□□□□ 0.23
RABGGTA-213ENST00000560127 CHRDL2Q6WN34 429 aa16.5■□□□□ 0.23
RABGGTA-213ENST00000560127 BRI3BPQ8WY22 251 aa16.5■□□□□ 0.23
RABGGTA-213ENST00000560127 OPTNQ96CV9 577 aa16.5■□□□□ 0.23
RABGGTA-213ENST00000560127 ELP3Q9H9T3 547 aa16.5■□□□□ 0.23
RABGGTA-213ENST00000560127 VEZTQ9HBM0 779 aa16.5■□□□□ 0.23
RABGGTA-213ENST00000560127 ARAP2Q8WZ64 1704 aa16.5■□□□□ 0.23
RABGGTA-213ENST00000560127 PI4KAP2A4QPH2 592 aa16.49■□□□□ 0.23
RABGGTA-213ENST00000560127 SNAP23O00161 211 aa16.49■□□□□ 0.23
RABGGTA-213ENST00000560127 MYO1BO43795 1136 aa16.49■□□□□ 0.23
RABGGTA-213ENST00000560127 RASA3Q14644 834 aa16.49■□□□□ 0.23
RABGGTA-213ENST00000560127 RALBP1Q15311 655 aa16.49■□□□□ 0.23
RABGGTA-213ENST00000560127 CWF19L2Q2TBE0 894 aaKnown RBP16.49■□□□□ 0.23
RABGGTA-213ENST00000560127 KSR2Q6VAB6 950 aa16.49■□□□□ 0.23
RABGGTA-213ENST00000560127 PI4KAP1Q8N8J0 262 aa16.49■□□□□ 0.23
RABGGTA-213ENST00000560127 C8orf58Q8NAV2 365 aa16.49■□□□□ 0.23
RABGGTA-213ENST00000560127 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
RABGGTA-213ENST00000560127 H7C1W4 665 aa16.48■□□□□ 0.23
RABGGTA-213ENST00000560127 ITGA6P23229 1130 aa16.48■□□□□ 0.23
RABGGTA-213ENST00000560127 KCNJ4P48050 445 aa16.48■□□□□ 0.23
RABGGTA-213ENST00000560127 CHRNDQ07001 517 aa16.48■□□□□ 0.23
RABGGTA-213ENST00000560127 ARHGEF6Q15052 776 aa16.48■□□□□ 0.23
RABGGTA-213ENST00000560127 TAF1CQ15572 869 aaPredicted RBP16.48■□□□□ 0.23
RABGGTA-213ENST00000560127 SH3TC2Q8TF17 1288 aa16.48■□□□□ 0.23
RABGGTA-213ENST00000560127 MPHOSPH8Q99549 860 aa16.48■□□□□ 0.23
RABGGTA-213ENST00000560127 ZFYVE28Q9HCC9 887 aa16.48■□□□□ 0.23
RABGGTA-213ENST00000560127 NEURL1BA8MQ27 555 aa16.47■□□□□ 0.23
RABGGTA-213ENST00000560127 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.47■□□□□ 0.23
RABGGTA-213ENST00000560127 UBE3BQ7Z3V4 1068 aa16.47■□□□□ 0.23
RABGGTA-213ENST00000560127 FAM43AQ8N2R8 423 aa16.47■□□□□ 0.23
RABGGTA-213ENST00000560127 ARHGAP39Q9C0H5 1083 aa16.47■□□□□ 0.23
RABGGTA-213ENST00000560127 IFT57Q9NWB7 429 aa16.47■□□□□ 0.23
RABGGTA-213ENST00000560127 RBM27Q9P2N5 1060 aaKnown RBP16.47■□□□□ 0.23
RABGGTA-213ENST00000560127 ADAMTS8Q9UP79 889 aa16.47■□□□□ 0.23
RABGGTA-213ENST00000560127 CACNA1FO60840 1977 aa16.47■□□□□ 0.23
RABGGTA-213ENST00000560127 CCL15-CCL14A0A0B4J2E2 113 aa16.46■□□□□ 0.23
RABGGTA-213ENST00000560127 IL1R1P14778 569 aa16.46■□□□□ 0.23
RABGGTA-213ENST00000560127 FKBP1AP62942 108 aaKnown RBP16.46■□□□□ 0.23
RABGGTA-213ENST00000560127 CCL15Q16663 113 aa16.46■□□□□ 0.23
RABGGTA-213ENST00000560127 CCDC30Q5VVM6 783 aa16.46■□□□□ 0.23
RABGGTA-213ENST00000560127 C15orf52Q6ZUT6 534 aaKnown RBP16.46■□□□□ 0.23
RABGGTA-213ENST00000560127 CDAN1Q8IWY9 1227 aa16.46■□□□□ 0.23
RABGGTA-213ENST00000560127 PLA2G12BQ9BX93 195 aa16.46■□□□□ 0.23
RABGGTA-213ENST00000560127 DLL1O00548 723 aa16.45■□□□□ 0.22
RABGGTA-213ENST00000560127 TAF5LO75529 589 aa16.45■□□□□ 0.22
RABGGTA-213ENST00000560127 CSF1RP07333 972 aa16.45■□□□□ 0.22
RABGGTA-213ENST00000560127 GNAI1P63096 354 aa16.45■□□□□ 0.22
RABGGTA-213ENST00000560127 NEXNQ0ZGT2 675 aa16.45■□□□□ 0.22
RABGGTA-213ENST00000560127 SHISA4Q96DD7 197 aa16.45■□□□□ 0.22
RABGGTA-213ENST00000560127 TEPSINQ96N21 525 aa16.45■□□□□ 0.22
RABGGTA-213ENST00000560127 JAG2Q9Y219 1238 aa16.45■□□□□ 0.22
RABGGTA-213ENST00000560127 GTF2A2P52657 109 aa16.44■□□□□ 0.22
RABGGTA-213ENST00000560127 RBM5P52756 815 aaKnown RBP eCLIP16.44■□□□□ 0.22
RABGGTA-213ENST00000560127 CASP7P55210 303 aa16.44■□□□□ 0.22
RABGGTA-213ENST00000560127 VGLL4Q14135 290 aa16.44■□□□□ 0.22
RABGGTA-213ENST00000560127 WDR43Q15061 677 aaKnown RBP eCLIP16.44■□□□□ 0.22
RABGGTA-213ENST00000560127 TSPYL6Q8N831 410 aa16.44■□□□□ 0.22
RABGGTA-213ENST00000560127 HELBQ8NG08 1087 aaPredicted RBP16.44■□□□□ 0.22
RABGGTA-213ENST00000560127 MGAMO43451 1857 aa16.44■□□□□ 0.22
RABGGTA-213ENST00000560127 SPDYE2Q495Y8 402 aa16.43■□□□□ 0.22
RABGGTA-213ENST00000560127 SLC17A8Q8NDX2 589 aa16.43■□□□□ 0.22
RABGGTA-213ENST00000560127 DPF3Q92784 378 aa16.43■□□□□ 0.22
RABGGTA-213ENST00000560127 PRO3102Q9H379 93 aa16.43■□□□□ 0.22
RABGGTA-213ENST00000560127 ZNF70Q9UC06 446 aaPredicted RBP16.43■□□□□ 0.22
RABGGTA-213ENST00000560127 MYBBP1AQ9BQG0 1328 aaKnown RBP16.43■□□□□ 0.22
RABGGTA-213ENST00000560127 TLR2O60603 784 aa16.42■□□□□ 0.22
RABGGTA-213ENST00000560127 MAP3K9P80192 1104 aa16.42■□□□□ 0.22
RABGGTA-213ENST00000560127 LACTBP83111 547 aaPredicted RBP16.42■□□□□ 0.22
RABGGTA-213ENST00000560127 TNFAIP1Q13829 316 aa16.42■□□□□ 0.22
RABGGTA-213ENST00000560127 GCKRQ14397 625 aa16.42■□□□□ 0.22
RABGGTA-213ENST00000560127 MTFR1Q15390 333 aa16.42■□□□□ 0.22
RABGGTA-213ENST00000560127 ZNF804AQ7Z570 1209 aa16.42■□□□□ 0.22
RABGGTA-213ENST00000560127 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.42■□□□□ 0.22
RABGGTA-213ENST00000560127 G2E3Q7L622 706 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms