RNA–Protein interactions for RNA: ENST00000559954.1

AC090607.3-201, humanhuman

TSL 2 BASIC

Gene AC090607.3, Length 388 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090607.3-201ENST00000559954 SUSD4Q5VX71 490 aa12.11□□□□□ -0.47
AC090607.3-201ENST00000559954 C9orf131Q5VYM1 1079 aa12.11□□□□□ -0.47
AC090607.3-201ENST00000559954 C8orf58Q8NAV2 365 aa12.11□□□□□ -0.47
AC090607.3-201ENST00000559954 RNF181Q9P0P0 153 aa12.11□□□□□ -0.47
AC090607.3-201ENST00000559954 CHD4Q14839 1912 aa12.11□□□□□ -0.47
AC090607.3-201ENST00000559954 AFDNP55196 1824 aaKnown RBP12.11□□□□□ -0.47
AC090607.3-201ENST00000559954 CFHP08603 1231 aa12.1□□□□□ -0.47
AC090607.3-201ENST00000559954 LMNB1P20700 586 aa12.1□□□□□ -0.47
AC090607.3-201ENST00000559954 NEXNQ0ZGT2 675 aa12.1□□□□□ -0.47
AC090607.3-201ENST00000559954 NR1H3Q13133 447 aa12.1□□□□□ -0.47
AC090607.3-201ENST00000559954 PRPF40BQ6NWY9 871 aaKnown RBP12.1□□□□□ -0.47
AC090607.3-201ENST00000559954 LRP10Q7Z4F1 713 aa12.1□□□□□ -0.47
AC090607.3-201ENST00000559954 ZNF526Q8TF50 670 aaPredicted RBP12.1□□□□□ -0.47
AC090607.3-201ENST00000559954 ZMIZ1Q9ULJ6 1067 aa12.1□□□□□ -0.47
AC090607.3-201ENST00000559954 UBN2Q6ZU65 1347 aa12.1□□□□□ -0.47
AC090607.3-201ENST00000559954 SH3TC1Q8TE82 1336 aa12.1□□□□□ -0.47
AC090607.3-201ENST00000559954 NTSR2O95665 410 aa12.09□□□□□ -0.47
AC090607.3-201ENST00000559954 EMP3P54852 163 aa12.09□□□□□ -0.47
AC090607.3-201ENST00000559954 CCDC93Q567U6 631 aa12.09□□□□□ -0.47
AC090607.3-201ENST00000559954 VARS2Q5ST30 1063 aaKnown RBP12.09□□□□□ -0.47
AC090607.3-201ENST00000559954 NLRP10Q86W26 655 aa12.09□□□□□ -0.47
AC090607.3-201ENST00000559954 MARVELD3Q96A59 401 aa12.09□□□□□ -0.47
AC090607.3-201ENST00000559954 SEPT9Q9UHD8 586 aaPredicted RBP12.09□□□□□ -0.47
AC090607.3-201ENST00000559954 RABGEF1Q9UJ41 708 aa12.09□□□□□ -0.47
AC090607.3-201ENST00000559954 KDM2BQ8NHM5 1336 aa12.09□□□□□ -0.47
AC090607.3-201ENST00000559954 FANCIQ9NVI1 1328 aa12.09□□□□□ -0.47
AC090607.3-201ENST00000559954 KIAA1551Q9HCM1 1747 aa12.08□□□□□ -0.47
AC090607.3-201ENST00000559954 KLRG2A4D1S0 409 aaPredicted RBP12.08□□□□□ -0.48
AC090607.3-201ENST00000559954 SLC4A3P48751 1232 aa12.08□□□□□ -0.48
AC090607.3-201ENST00000559954 TMEM164Q5U3C3 297 aa12.08□□□□□ -0.48
AC090607.3-201ENST00000559954 DIEXFQ68CQ4 756 aaKnown RBP12.08□□□□□ -0.48
AC090607.3-201ENST00000559954 CC2D2BQ6DHV5 1058 aa12.08□□□□□ -0.48
AC090607.3-201ENST00000559954 RETREG3Q86VR2 466 aa12.08□□□□□ -0.48
AC090607.3-201ENST00000559954 RTKN2Q8IZC4 609 aa12.08□□□□□ -0.48
AC090607.3-201ENST00000559954 TAOK3Q9H2K8 898 aa12.08□□□□□ -0.48
AC090607.3-201ENST00000559954 PIK3CDO00329 1044 aa12.07□□□□□ -0.48
AC090607.3-201ENST00000559954 RIC1Q4ADV7 1423 aa12.07□□□□□ -0.48
AC090607.3-201ENST00000559954 DESI1Q6ICB0 168 aa12.07□□□□□ -0.48
AC090607.3-201ENST00000559954 DDX46Q7L014 1031 aaKnown RBP12.07□□□□□ -0.48
AC090607.3-201ENST00000559954 C16orf71Q8IYS4 520 aaPredicted RBP12.07□□□□□ -0.48
AC090607.3-201ENST00000559954 TSPYL6Q8N831 410 aa12.07□□□□□ -0.48
AC090607.3-201ENST00000559954 MYD88Q99836 296 aa12.07□□□□□ -0.48
AC090607.3-201ENST00000559954 PHAXQ9H814 394 aaKnown RBP12.07□□□□□ -0.48
AC090607.3-201ENST00000559954 ZC3H4Q9UPT8 1303 aaKnown RBP12.07□□□□□ -0.48
AC090607.3-201ENST00000559954 ATP5J2-PTCD1G3V325 749 aa12.06□□□□□ -0.48
AC090607.3-201ENST00000559954 FBXO45P0C2W1 286 aa12.06□□□□□ -0.48
AC090607.3-201ENST00000559954 RASSF7Q02833 373 aa12.06□□□□□ -0.48
AC090607.3-201ENST00000559954 EXOSC9Q06265 439 aaKnown RBP12.06□□□□□ -0.48
AC090607.3-201ENST00000559954 SLC10A5Q5PT55 438 aa12.06□□□□□ -0.48
AC090607.3-201ENST00000559954 KSR2Q6VAB6 950 aa12.06□□□□□ -0.48
AC090607.3-201ENST00000559954 STK32AQ8WU08 396 aa12.06□□□□□ -0.48
AC090607.3-201ENST00000559954 CRAMP1Q96RY5 1269 aa12.06□□□□□ -0.48
AC090607.3-201ENST00000559954 ABCC12Q96J65 1359 aa12.05□□□□□ -0.48
AC090607.3-201ENST00000559954 ARFGEF1Q9Y6D6 1849 aa12.05□□□□□ -0.48
AC090607.3-201ENST00000559954 TCERG1O14776 1098 aaKnown RBP12.05□□□□□ -0.48
AC090607.3-201ENST00000559954 TRIM28Q13263 835 aaKnown RBP12.05□□□□□ -0.48
AC090607.3-201ENST00000559954 CRY2Q49AN0 593 aa12.05□□□□□ -0.48
AC090607.3-201ENST00000559954 LYPD8Q6UX82 237 aa12.05□□□□□ -0.48
AC090607.3-201ENST00000559954 CCDC191Q8NCU4 936 aa12.05□□□□□ -0.48
AC090607.3-201ENST00000559954 ISCA1Q9BUE6 129 aa12.05□□□□□ -0.48
AC090607.3-201ENST00000559954 CWC25Q9NXE8 425 aaPredicted RBP12.05□□□□□ -0.48
AC090607.3-201ENST00000559954 MAP3K2Q9Y2U5 619 aa12.05□□□□□ -0.48
AC090607.3-201ENST00000559954 ADCY9O60503 1353 aa12.05□□□□□ -0.48
AC090607.3-201ENST00000559954 NUP98P52948 1817 aa12.04□□□□□ -0.48
AC090607.3-201ENST00000559954 FAM205CA6NFA0 338 aa12.04□□□□□ -0.48
AC090607.3-201ENST00000559954 PPEF1O14829 653 aaPredicted RBP12.04□□□□□ -0.48
AC090607.3-201ENST00000559954 HCLS1P14317 486 aaPredicted RBP12.04□□□□□ -0.48
AC090607.3-201ENST00000559954 HOXA10P31260 410 aaPredicted RBP12.04□□□□□ -0.48
AC090607.3-201ENST00000559954 PSEN2P49810 448 aa12.04□□□□□ -0.48
AC090607.3-201ENST00000559954 FKBP4Q02790 459 aaKnown RBP eCLIP12.04□□□□□ -0.48
AC090607.3-201ENST00000559954 FKBP5Q13451 457 aaPredicted RBP12.04□□□□□ -0.48
AC090607.3-201ENST00000559954 PHLDB3Q6NSJ2 640 aa12.04□□□□□ -0.48
AC090607.3-201ENST00000559954 METTL22Q9BUU2 404 aaPredicted RBP12.04□□□□□ -0.48
AC090607.3-201ENST00000559954 NOVA2Q9UNW9 492 aaKnown RBP12.04□□□□□ -0.48
AC090607.3-201ENST00000559954 DLEC1Q9Y238 1755 aa12.04□□□□□ -0.48
AC090607.3-201ENST00000559954 LTBP3Q9NS15 1303 aa12.04□□□□□ -0.48
AC090607.3-201ENST00000559954 PI4KAP2A4QPH2 592 aa12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 USP17L3A6NCW0 530 aa12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 USP17L4A6NCW7 530 aa12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 ZBBXA8MT70 800 aa12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 NFKBIEO00221 500 aa12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 IRS4O14654 1257 aaPredicted RBP12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 VAMP4O75379 141 aa12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 BBOX1O75936 387 aa12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 USP17L2Q6R6M4 530 aa12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 USP17L1Q7RTZ2 530 aa12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 SAMD7Q7Z3H4 446 aa12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 TMC4Q7Z404 712 aa12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 PI4KAP1Q8N8J0 262 aa12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 ZBTB38Q8NAP3 1195 aaPredicted RBP12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 SUPT20HQ8NEM7 779 aa12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 JDP2Q8WYK2 163 aa12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 FAM89AQ96GI7 184 aa12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 BRCA1P38398 1863 aaKnown RBP12.03□□□□□ -0.48
AC090607.3-201ENST00000559954 ANKRD31Q8N7Z5 1873 aa12.02□□□□□ -0.48
AC090607.3-201ENST00000559954 C1QTNF8P60827 252 aa12.02□□□□□ -0.49
AC090607.3-201ENST00000559954 MORN1Q5T089 497 aa12.02□□□□□ -0.49
AC090607.3-201ENST00000559954 PLEKHM2Q8IWE5 1019 aa12.02□□□□□ -0.49
AC090607.3-201ENST00000559954 SLC4A5Q9BY07 1137 aa12.02□□□□□ -0.49
AC090607.3-201ENST00000559954 ARHGAP33O14559 1287 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms