RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 DENND2AQ9ULE3 1009 aa12.67□□□□□ -0.38
TPM1-221ENST00000559831 JAG2Q9Y219 1238 aa12.67□□□□□ -0.38
TPM1-221ENST00000559831 SEMA3EO15041 775 aa12.66□□□□□ -0.38
TPM1-221ENST00000559831 CDC45O75419 566 aa12.66□□□□□ -0.38
TPM1-221ENST00000559831 FBXW7Q969H0 707 aa12.66□□□□□ -0.38
TPM1-221ENST00000559831 COA1Q9GZY4 146 aa12.66□□□□□ -0.38
TPM1-221ENST00000559831 TAOK3Q9H2K8 898 aa12.66□□□□□ -0.38
TPM1-221ENST00000559831 ANTXR1Q9H6X2 564 aa12.66□□□□□ -0.38
TPM1-221ENST00000559831 DBNDD1Q9H9R9 158 aa12.66□□□□□ -0.38
TPM1-221ENST00000559831 SCN9AQ15858 1988 aa12.65□□□□□ -0.38
TPM1-221ENST00000559831 PSME4Q14997 1843 aa12.65□□□□□ -0.38
TPM1-221ENST00000559831 CYP2E1P05181 493 aaPredicted RBP12.65□□□□□ -0.38
TPM1-221ENST00000559831 RASSF7Q02833 373 aa12.65□□□□□ -0.38
TPM1-221ENST00000559831 KIAA2012Q0VF49 1180 aa12.65□□□□□ -0.38
TPM1-221ENST00000559831 TBC1D9Q6ZT07 1266 aa12.65□□□□□ -0.38
TPM1-221ENST00000559831 LARGE2Q8N3Y3 721 aa12.65□□□□□ -0.38
TPM1-221ENST00000559831 TDRD7Q8NHU6 1098 aaKnown RBP12.65□□□□□ -0.38
TPM1-221ENST00000559831 MAST2Q6P0Q8 1798 aa12.64□□□□□ -0.39
TPM1-221ENST00000559831 SBF1O95248 1867 aa12.64□□□□□ -0.39
TPM1-221ENST00000559831 NFKBIEO00221 500 aa12.64□□□□□ -0.39
TPM1-221ENST00000559831 ECE2O60344 883 aa12.64□□□□□ -0.39
TPM1-221ENST00000559831 IL1R1P14778 569 aa12.64□□□□□ -0.39
TPM1-221ENST00000559831 IARSP41252 1262 aaKnown RBP12.64□□□□□ -0.39
TPM1-221ENST00000559831 TTF1Q15361 905 aaPredicted RBP12.64□□□□□ -0.39
TPM1-221ENST00000559831 CASC1Q6TDU7 716 aa12.64□□□□□ -0.39
TPM1-221ENST00000559831 ARHGAP27Q6ZUM4 889 aa12.64□□□□□ -0.39
TPM1-221ENST00000559831 KBTBD3Q8NAB2 608 aa12.64□□□□□ -0.39
TPM1-221ENST00000559831 PIH1D3Q9NQM4 214 aaKnown RBP12.64□□□□□ -0.39
TPM1-221ENST00000559831 ABCF2Q9UG63 623 aa12.64□□□□□ -0.39
TPM1-221ENST00000559831 DICER1Q9UPY3 1922 aaKnown RBP12.64□□□□□ -0.39
TPM1-221ENST00000559831 ZNF646O15015 1829 aaPredicted RBP12.63□□□□□ -0.39
TPM1-221ENST00000559831 IDH1O75874 414 aaKnown RBP12.63□□□□□ -0.39
TPM1-221ENST00000559831 C8orf34Q49A92 452 aa12.63□□□□□ -0.39
TPM1-221ENST00000559831 DIAPH3Q9NSV4 1193 aa12.63□□□□□ -0.39
TPM1-221ENST00000559831 COL4A5P29400 1685 aa12.63□□□□□ -0.39
TPM1-221ENST00000559831 PDS5AQ29RF7 1337 aaKnown RBP12.62□□□□□ -0.39
TPM1-221ENST00000559831 YBX3P16989 372 aaKnown RBP eCLIP12.62□□□□□ -0.39
TPM1-221ENST00000559831 CHMLP26374 656 aa12.62□□□□□ -0.39
TPM1-221ENST00000559831 GTF2IP78347 998 aa12.62□□□□□ -0.39
TPM1-221ENST00000559831 NIM1KQ8IY84 436 aa12.62□□□□□ -0.39
TPM1-221ENST00000559831 WDR66Q8TBY9 1149 aa12.62□□□□□ -0.39
TPM1-221ENST00000559831 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.62□□□□□ -0.39
TPM1-221ENST00000559831 RAI14Q9P0K7 980 aa12.62□□□□□ -0.39
TPM1-221ENST00000559831 LRP2BPQ9P2M1 347 aa12.62□□□□□ -0.39
TPM1-221ENST00000559831 MYH2Q9UKX2 1941 aa12.62□□□□□ -0.39
TPM1-221ENST00000559831 LTBP3Q9NS15 1303 aa12.62□□□□□ -0.39
TPM1-221ENST00000559831 RFX7Q2KHR2 1363 aa12.61□□□□□ -0.39
TPM1-221ENST00000559831 HIP1O00291 1037 aa12.61□□□□□ -0.39
TPM1-221ENST00000559831 RNF113AO15541 343 aaKnown RBP12.61□□□□□ -0.39
TPM1-221ENST00000559831 CHGBP05060 677 aa12.61□□□□□ -0.39
TPM1-221ENST00000559831 MAP3K12Q12852 859 aa12.61□□□□□ -0.39
TPM1-221ENST00000559831 NMIQ13287 307 aaPredicted RBP12.61□□□□□ -0.39
TPM1-221ENST00000559831 GPR162Q16538 588 aa12.61□□□□□ -0.39
TPM1-221ENST00000559831 LRRFIP1Q32MZ4 808 aaKnown RBP12.61□□□□□ -0.39
TPM1-221ENST00000559831 CWC27Q6UX04 472 aaKnown RBP12.61□□□□□ -0.39
TPM1-221ENST00000559831 ERICH6Q7L0X2 663 aa12.61□□□□□ -0.39
TPM1-221ENST00000559831 PODNQ7Z5L7 613 aa12.61□□□□□ -0.39
TPM1-221ENST00000559831 ZGPATQ8N5A5 531 aaKnown RBP12.61□□□□□ -0.39
TPM1-221ENST00000559831 VPS33BQ9H267 617 aa12.61□□□□□ -0.39
TPM1-221ENST00000559831 KCNQ5Q9NR82 932 aa12.61□□□□□ -0.39
TPM1-221ENST00000559831 YDJCA8MPS7 323 aa12.6□□□□□ -0.39
TPM1-221ENST00000559831 ZBTB22O15209 634 aa12.6□□□□□ -0.39
TPM1-221ENST00000559831 SLFNL1Q499Z3 407 aa12.6□□□□□ -0.39
TPM1-221ENST00000559831 MFSD14BQ5SR56 506 aa12.6□□□□□ -0.39
TPM1-221ENST00000559831 SPTY2D1Q68D10 685 aaPredicted RBP12.6□□□□□ -0.39
TPM1-221ENST00000559831 TTLL5Q6EMB2 1281 aa12.6□□□□□ -0.39
TPM1-221ENST00000559831 ZSCAN25Q6NSZ9 544 aa12.6□□□□□ -0.39
TPM1-221ENST00000559831 MAGEB6Q8N7X4 407 aa12.6□□□□□ -0.39
TPM1-221ENST00000559831 TBC1D22AQ8WUA7 517 aa12.6□□□□□ -0.39
TPM1-221ENST00000559831 JDP2Q8WYK2 163 aa12.6□□□□□ -0.39
TPM1-221ENST00000559831 FAM205AQ6ZU69 1335 aa12.6□□□□□ -0.39
TPM1-221ENST00000559831 SALL1Q9NSC2 1324 aa12.6□□□□□ -0.39
TPM1-221ENST00000559831 TIAM2Q8IVF5 1701 aa12.59□□□□□ -0.39
TPM1-221ENST00000559831 A0A0D9SFI3 127 aa12.59□□□□□ -0.39
TPM1-221ENST00000559831 LDHBP07195 334 aaKnown RBP12.59□□□□□ -0.39
TPM1-221ENST00000559831 PDE6AP16499 860 aa12.59□□□□□ -0.39
TPM1-221ENST00000559831 PRELPP51888 382 aa12.59□□□□□ -0.39
TPM1-221ENST00000559831 SLC9C2Q5TAH2 1124 aa12.59□□□□□ -0.39
TPM1-221ENST00000559831 DZIP1Q86YF9 867 aaKnown RBP12.59□□□□□ -0.39
TPM1-221ENST00000559831 RUFY2Q8WXA3 655 aa12.59□□□□□ -0.39
TPM1-221ENST00000559831 FAM227BQ96M60 508 aa12.59□□□□□ -0.39
TPM1-221ENST00000559831 MXD3Q9BW11 206 aa12.59□□□□□ -0.39
TPM1-221ENST00000559831 BACH2Q9BYV9 841 aa12.59□□□□□ -0.39
TPM1-221ENST00000559831 ZNF532Q9HCE3 1301 aa12.59□□□□□ -0.39
TPM1-221ENST00000559831 ADAMTSL1Q8N6G6 1762 aa12.58□□□□□ -0.39
TPM1-221ENST00000559831 USP17L3A6NCW0 530 aa12.58□□□□□ -0.4
TPM1-221ENST00000559831 USP17L4A6NCW7 530 aa12.58□□□□□ -0.4
TPM1-221ENST00000559831 F8W031 263 aaPredicted RBP12.58□□□□□ -0.4
TPM1-221ENST00000559831 RAD17O75943 681 aa12.58□□□□□ -0.4
TPM1-221ENST00000559831 ZFYP08048 801 aaPredicted RBP12.58□□□□□ -0.4
TPM1-221ENST00000559831 PRDX5P30044 214 aa12.58□□□□□ -0.4
TPM1-221ENST00000559831 ADD2P35612 726 aa12.58□□□□□ -0.4
TPM1-221ENST00000559831 MFAP1P55081 439 aaKnown RBP12.58□□□□□ -0.4
TPM1-221ENST00000559831 GRIK5Q16478 980 aa12.58□□□□□ -0.4
TPM1-221ENST00000559831 USP17L1Q7RTZ2 530 aa12.58□□□□□ -0.4
TPM1-221ENST00000559831 ESYT1Q9BSJ8 1104 aa12.58□□□□□ -0.4
TPM1-221ENST00000559831 ZNRF3Q9ULT6 936 aa12.58□□□□□ -0.4
TPM1-221ENST00000559831 LMNB1P20700 586 aa12.57□□□□□ -0.4
TPM1-221ENST00000559831 CYP7A1P22680 504 aa12.57□□□□□ -0.4
TPM1-221ENST00000559831 MECOMQ03112 1051 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms