RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 Q6ZS46 218 aa7.78□□□□□ -1.16
CTDSPL2-207ENST00000559738 VN1R5Q7Z5H4 357 aa7.78□□□□□ -1.16
CTDSPL2-207ENST00000559738 DDX3YO15523 660 aaKnown RBP7.77□□□□□ -1.17
CTDSPL2-207ENST00000559738 CPNE3O75131 537 aaKnown RBP7.77□□□□□ -1.17
CTDSPL2-207ENST00000559738 NEFLP07196 543 aa7.77□□□□□ -1.17
CTDSPL2-207ENST00000559738 CABP4P57796 275 aa7.77□□□□□ -1.17
CTDSPL2-207ENST00000559738 HGSNATQ68CP4 663 aa7.77□□□□□ -1.17
CTDSPL2-207ENST00000559738 KLHL23Q8NBE8 558 aa7.77□□□□□ -1.17
CTDSPL2-207ENST00000559738 BSNDQ8WZ55 320 aa7.77□□□□□ -1.17
CTDSPL2-207ENST00000559738 ALKBH8Q96BT7 664 aaKnown RBP7.77□□□□□ -1.17
CTDSPL2-207ENST00000559738 KLHDC7BQ96G42 594 aa7.77□□□□□ -1.17
CTDSPL2-207ENST00000559738 DMRTB1Q96MA1 342 aa7.77□□□□□ -1.17
CTDSPL2-207ENST00000559738 SEC31BQ9NQW1 1179 aa7.77□□□□□ -1.17
CTDSPL2-207ENST00000559738 ADAM11O75078 769 aa7.76□□□□□ -1.17
CTDSPL2-207ENST00000559738 MAPK1P28482 360 aa7.76□□□□□ -1.17
CTDSPL2-207ENST00000559738 ASAP3Q8TDY4 903 aa7.76□□□□□ -1.17
CTDSPL2-207ENST00000559738 UBASH3BQ8TF42 649 aa7.76□□□□□ -1.17
CTDSPL2-207ENST00000559738 FOXD4L4Q8WXT5 416 aaPredicted RBP7.76□□□□□ -1.17
CTDSPL2-207ENST00000559738 TCF12Q99081 682 aa7.76□□□□□ -1.17
CTDSPL2-207ENST00000559738 NPHS2Q9NP85 383 aa7.76□□□□□ -1.17
CTDSPL2-207ENST00000559738 PIP4K2BP78356 416 aa7.75□□□□□ -1.17
CTDSPL2-207ENST00000559738 DSC3Q14574 896 aa7.75□□□□□ -1.17
CTDSPL2-207ENST00000559738 DUOXA2Q1HG44 320 aa7.75□□□□□ -1.17
CTDSPL2-207ENST00000559738 KIAA0319Q5VV43 1072 aa7.75□□□□□ -1.17
CTDSPL2-207ENST00000559738 CCNJLQ8IV13 435 aa7.75□□□□□ -1.17
CTDSPL2-207ENST00000559738 SLC7A3Q8WY07 619 aa7.75□□□□□ -1.17
CTDSPL2-207ENST00000559738 CCDC74AQ96AQ1 378 aa7.75□□□□□ -1.17
CTDSPL2-207ENST00000559738 CSRNP1Q96S65 589 aa7.75□□□□□ -1.17
CTDSPL2-207ENST00000559738 DNAJC25Q9H1X3 360 aa7.75□□□□□ -1.17
CTDSPL2-207ENST00000559738 SOX1O00570 391 aaPredicted RBP7.74□□□□□ -1.17
CTDSPL2-207ENST00000559738 PDIA4P13667 645 aaKnown RBP7.74□□□□□ -1.17
CTDSPL2-207ENST00000559738 GRIA4P48058 902 aa7.74□□□□□ -1.17
CTDSPL2-207ENST00000559738 NLRP12P59046 1061 aa7.74□□□□□ -1.17
CTDSPL2-207ENST00000559738 KIAA1211Q6ZU35 1233 aa7.74□□□□□ -1.17
CTDSPL2-207ENST00000559738 WNT8BQ93098 351 aa7.74□□□□□ -1.17
CTDSPL2-207ENST00000559738 UBL7Q96S82 380 aaPredicted RBP7.74□□□□□ -1.17
CTDSPL2-207ENST00000559738 LIN7BQ9HAP6 207 aa7.74□□□□□ -1.17
CTDSPL2-207ENST00000559738 SPRED3Q2MJR0 410 aa7.73□□□□□ -1.17
CTDSPL2-207ENST00000559738 ARTNQ5T4W7 220 aa7.73□□□□□ -1.17
CTDSPL2-207ENST00000559738 AEBP1Q8IUX7 1158 aa7.73□□□□□ -1.17
CTDSPL2-207ENST00000559738 PSMG3-AS1Q96PY0 264 aa7.73□□□□□ -1.17
CTDSPL2-207ENST00000559738 CEP41Q9BYV8 373 aa7.73□□□□□ -1.17
CTDSPL2-207ENST00000559738 ZFP64Q9NPA5 681 aa7.73□□□□□ -1.17
CTDSPL2-207ENST00000559738 A0A096LPE4 126 aa7.72□□□□□ -1.17
CTDSPL2-207ENST00000559738 A0A1W2PPZ6 126 aa7.72□□□□□ -1.17
CTDSPL2-207ENST00000559738 TREHO43280 583 aa7.72□□□□□ -1.17
CTDSPL2-207ENST00000559738 FSTP19883 344 aa7.72□□□□□ -1.17
CTDSPL2-207ENST00000559738 IKBKEQ14164 716 aa7.72□□□□□ -1.17
CTDSPL2-207ENST00000559738 EPS8L3Q8TE67 593 aaKnown RBP7.72□□□□□ -1.17
CTDSPL2-207ENST00000559738 OSGEPQ9NPF4 335 aa7.72□□□□□ -1.17
CTDSPL2-207ENST00000559738 PATL2C9JE40 543 aaKnown RBP7.71□□□□□ -1.18
CTDSPL2-207ENST00000559738 ESRRAP11474 423 aaPredicted RBP7.71□□□□□ -1.18
CTDSPL2-207ENST00000559738 C19orf57Q0VDD7 668 aa7.71□□□□□ -1.18
CTDSPL2-207ENST00000559738 LRP8Q14114 963 aa7.71□□□□□ -1.18
CTDSPL2-207ENST00000559738 PI16Q6UXB8 463 aa7.71□□□□□ -1.18
CTDSPL2-207ENST00000559738 UTP4Q969X6 686 aaKnown RBP7.71□□□□□ -1.18
CTDSPL2-207ENST00000559738 EHD4Q9H223 541 aa7.71□□□□□ -1.18
CTDSPL2-207ENST00000559738 DHX15O43143 795 aaKnown RBP7.7□□□□□ -1.18
CTDSPL2-207ENST00000559738 ARL4DP49703 201 aa7.7□□□□□ -1.18
CTDSPL2-207ENST00000559738 PLCB3Q01970 1234 aa7.7□□□□□ -1.18
CTDSPL2-207ENST00000559738 ZNF423Q2M1K9 1284 aa7.7□□□□□ -1.18
CTDSPL2-207ENST00000559738 ARMC10Q8N2F6 343 aa7.7□□□□□ -1.18
CTDSPL2-207ENST00000559738 ASB16Q96NS5 453 aa7.7□□□□□ -1.18
CTDSPL2-207ENST00000559738 RAXQ9Y2V3 346 aa7.7□□□□□ -1.18
CTDSPL2-207ENST00000559738 GRM2Q14416 872 aa7.69□□□□□ -1.18
CTDSPL2-207ENST00000559738 ENOX2Q16206 610 aaKnown RBP7.69□□□□□ -1.18
CTDSPL2-207ENST00000559738 UVSSAQ2YD98 709 aa7.69□□□□□ -1.18
CTDSPL2-207ENST00000559738 GLIS3Q8NEA6 775 aa7.69□□□□□ -1.18
CTDSPL2-207ENST00000559738 FAM46AQ96IP4 442 aaKnown RBP7.69□□□□□ -1.18
CTDSPL2-207ENST00000559738 ABCB6Q9NP58 842 aa7.69□□□□□ -1.18
CTDSPL2-207ENST00000559738 PNMA6FA0A0J9YX94 578 aa7.68□□□□□ -1.18
CTDSPL2-207ENST00000559738 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.68□□□□□ -1.18
CTDSPL2-207ENST00000559738 GADD45BO75293 160 aaPredicted RBP7.68□□□□□ -1.18
CTDSPL2-207ENST00000559738 ITPKAP23677 461 aa7.68□□□□□ -1.18
CTDSPL2-207ENST00000559738 FMR1Q06787 632 aaKnown RBP eCLIP7.68□□□□□ -1.18
CTDSPL2-207ENST00000559738 PCDH1Q08174 1060 aa7.68□□□□□ -1.18
CTDSPL2-207ENST00000559738 PRPF40BQ6NWY9 871 aaKnown RBP7.68□□□□□ -1.18
CTDSPL2-207ENST00000559738 SETDB2Q96T68 719 aa7.68□□□□□ -1.18
CTDSPL2-207ENST00000559738 RUSC1Q9BVN2 902 aa7.68□□□□□ -1.18
CTDSPL2-207ENST00000559738 RNF208Q9H0X6 261 aa7.68□□□□□ -1.18
CTDSPL2-207ENST00000559738 CLEC4MQ9H2X3 399 aaPredicted RBP7.68□□□□□ -1.18
CTDSPL2-207ENST00000559738 SOX17Q9H6I2 414 aaPredicted RBP7.68□□□□□ -1.18
CTDSPL2-207ENST00000559738 STOML1Q9UBI4 398 aa7.68□□□□□ -1.18
CTDSPL2-207ENST00000559738 RNF112Q9ULX5 631 aa7.68□□□□□ -1.18
CTDSPL2-207ENST00000559738 SART1O43290 800 aaKnown RBP7.67□□□□□ -1.18
CTDSPL2-207ENST00000559738 ANKRD34AQ69YU3 496 aa7.67□□□□□ -1.18
CTDSPL2-207ENST00000559738 ZSCAN29Q8IWY8 852 aaPredicted RBP7.67□□□□□ -1.18
CTDSPL2-207ENST00000559738 MYRFLQ96LU7 910 aa7.67□□□□□ -1.18
CTDSPL2-207ENST00000559738 USP26Q9BXU7 913 aa7.67□□□□□ -1.18
CTDSPL2-207ENST00000559738 KRTAP9-2Q9BYQ4 174 aa7.67□□□□□ -1.18
CTDSPL2-207ENST00000559738 NRSN2Q9GZP1 204 aa7.67□□□□□ -1.18
CTDSPL2-207ENST00000559738 ZNF576Q9H609 170 aa7.67□□□□□ -1.18
CTDSPL2-207ENST00000559738 TMEM238LA0A1B0GVL6 79 aa7.66□□□□□ -1.18
CTDSPL2-207ENST00000559738 HYAL3O43820 417 aaPredicted RBP7.66□□□□□ -1.18
CTDSPL2-207ENST00000559738 DLGAP3O95886 979 aa7.66□□□□□ -1.18
CTDSPL2-207ENST00000559738 PREPP48147 710 aa7.66□□□□□ -1.18
CTDSPL2-207ENST00000559738 FDX2Q6P4F2 183 aa7.66□□□□□ -1.18
CTDSPL2-207ENST00000559738 SND1Q7KZF4 910 aaKnown RBP eCLIP7.66□□□□□ -1.18
CTDSPL2-207ENST00000559738 NBPF11Q86T75 865 aa7.66□□□□□ -1.18
CTDSPL2-207ENST00000559738 LOC100289279A0A1B0GTE1 492 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms