RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 KIAA1211Q6ZU35 1233 aa6.18□□□□□ -1.42
CASC4-210ENST00000559550 ACAD11Q709F0 780 aa6.18□□□□□ -1.42
CASC4-210ENST00000559550 ZNF438Q7Z4V0 828 aa6.18□□□□□ -1.42
CASC4-210ENST00000559550 FAM20CQ8IXL6 584 aa6.18□□□□□ -1.42
CASC4-210ENST00000559550 GJD3Q8N144 294 aa6.18□□□□□ -1.42
CASC4-210ENST00000559550 NSUN5Q96P11 429 aaKnown RBP6.18□□□□□ -1.42
CASC4-210ENST00000559550 CNTN3Q9P232 1028 aa6.18□□□□□ -1.42
CASC4-210ENST00000559550 BIN2Q9UBW5 565 aaPredicted RBP6.18□□□□□ -1.42
CASC4-210ENST00000559550 BRPF3Q9ULD4 1205 aa6.18□□□□□ -1.42
CASC4-210ENST00000559550 TRIM33Q9UPN9 1127 aa6.18□□□□□ -1.42
CASC4-210ENST00000559550 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.18□□□□□ -1.42
CASC4-210ENST00000559550 PCSK2P16519 638 aa6.17□□□□□ -1.42
CASC4-210ENST00000559550 COL13A1Q5TAT6 717 aaPredicted RBP6.17□□□□□ -1.42
CASC4-210ENST00000559550 PDE12Q6L8Q7 609 aaKnown RBP6.17□□□□□ -1.42
CASC4-210ENST00000559550 OR13H1Q8NG92 308 aa6.17□□□□□ -1.42
CASC4-210ENST00000559550 ABI2Q9NYB9 513 aaPredicted RBP6.17□□□□□ -1.42
CASC4-210ENST00000559550 PRNPP04156 253 aa6.16□□□□□ -1.42
CASC4-210ENST00000559550 RPLP1P05386 114 aaKnown RBP6.16□□□□□ -1.42
CASC4-210ENST00000559550 PSAPP07602 524 aa6.16□□□□□ -1.42
CASC4-210ENST00000559550 CD68P34810 354 aaPredicted RBP6.16□□□□□ -1.42
CASC4-210ENST00000559550 XKR5Q6UX68 686 aa6.16□□□□□ -1.42
CASC4-210ENST00000559550 HOMEZQ8IX15 550 aa6.16□□□□□ -1.42
CASC4-210ENST00000559550 CACTIN-AS1Q8N1I8 211 aa6.16□□□□□ -1.42
CASC4-210ENST00000559550 MUC3BQ9H195 1237 aa6.16□□□□□ -1.42
CASC4-210ENST00000559550 CHRDQ9H2X0 955 aa6.16□□□□□ -1.42
CASC4-210ENST00000559550 CCDC39Q9UFE4 941 aa6.16□□□□□ -1.42
CASC4-210ENST00000559550 FOXD3Q9UJU5 478 aaPredicted RBP6.16□□□□□ -1.42
CASC4-210ENST00000559550 PPME1Q9Y570 386 aa6.16□□□□□ -1.42
CASC4-210ENST00000559550 WDR64B1ANS9 1081 aa6.15□□□□□ -1.42
CASC4-210ENST00000559550 LINC01387J3KSC0 135 aa6.15□□□□□ -1.42
CASC4-210ENST00000559550 NDUFB5O43674 189 aa6.15□□□□□ -1.42
CASC4-210ENST00000559550 TNFRSF21O75509 655 aa6.15□□□□□ -1.42
CASC4-210ENST00000559550 IGHA2P01877 340 aa6.15□□□□□ -1.42
CASC4-210ENST00000559550 SOX18P35713 384 aa6.15□□□□□ -1.42
CASC4-210ENST00000559550 USP5P45974 858 aa6.15□□□□□ -1.42
CASC4-210ENST00000559550 TTC39BQ5VTQ0 682 aaPredicted RBP6.15□□□□□ -1.42
CASC4-210ENST00000559550 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.15□□□□□ -1.42
CASC4-210ENST00000559550 C1orf127Q8N9H9 656 aa6.15□□□□□ -1.42
CASC4-210ENST00000559550 PIM2Q9P1W9 311 aa6.15□□□□□ -1.42
CASC4-210ENST00000559550 GHRHP01286 108 aa6.14□□□□□ -1.43
CASC4-210ENST00000559550 JUNBP17275 347 aaPredicted RBP6.14□□□□□ -1.43
CASC4-210ENST00000559550 ADAMTSL4Q6UY14 1074 aa6.14□□□□□ -1.43
CASC4-210ENST00000559550 BEND4Q6ZU67 534 aa6.14□□□□□ -1.43
CASC4-210ENST00000559550 TTC16Q8NEE8 873 aa6.14□□□□□ -1.43
CASC4-210ENST00000559550 FAM129BQ96TA1 746 aa6.14□□□□□ -1.43
CASC4-210ENST00000559550 KANSL3Q9P2N6 904 aa6.14□□□□□ -1.43
CASC4-210ENST00000559550 PATL2C9JE40 543 aaKnown RBP6.13□□□□□ -1.43
CASC4-210ENST00000559550 GPR182O15218 404 aa6.13□□□□□ -1.43
CASC4-210ENST00000559550 BMP3P12645 472 aa6.13□□□□□ -1.43
CASC4-210ENST00000559550 RBCK1Q9BYM8 510 aa6.13□□□□□ -1.43
CASC4-210ENST00000559550 EREGO14944 169 aa6.12□□□□□ -1.43
CASC4-210ENST00000559550 ADAM11O75078 769 aa6.12□□□□□ -1.43
CASC4-210ENST00000559550 KIF4AO95239 1232 aa6.12□□□□□ -1.43
CASC4-210ENST00000559550 CES1P23141 567 aa6.12□□□□□ -1.43
CASC4-210ENST00000559550 EHHADHQ08426 723 aa6.12□□□□□ -1.43
CASC4-210ENST00000559550 TXNDC11Q6PKC3 985 aa6.12□□□□□ -1.43
CASC4-210ENST00000559550 TMC7Q7Z402 723 aa6.12□□□□□ -1.43
CASC4-210ENST00000559550 TMC1Q8TDI8 760 aa6.12□□□□□ -1.43
CASC4-210ENST00000559550 SNX29Q8TEQ0 813 aa6.12□□□□□ -1.43
CASC4-210ENST00000559550 FOXD4L4Q8WXT5 416 aaPredicted RBP6.12□□□□□ -1.43
CASC4-210ENST00000559550 DCTN4Q9UJW0 460 aa6.12□□□□□ -1.43
CASC4-210ENST00000559550 ANGEL1Q9UNK9 670 aaKnown RBP6.12□□□□□ -1.43
CASC4-210ENST00000559550 DBX1A6NMT0 343 aa6.11□□□□□ -1.43
CASC4-210ENST00000559550 PHACTR2O75167 634 aa6.11□□□□□ -1.43
CASC4-210ENST00000559550 ACPPP15309 386 aa6.11□□□□□ -1.43
CASC4-210ENST00000559550 FOSL1P15407 271 aa6.11□□□□□ -1.43
CASC4-210ENST00000559550 MAPK1P28482 360 aa6.11□□□□□ -1.43
CASC4-210ENST00000559550 PREPP48147 710 aa6.11□□□□□ -1.43
CASC4-210ENST00000559550 ATP11AP98196 1134 aa6.11□□□□□ -1.43
CASC4-210ENST00000559550 HYAL2Q12891 473 aa6.11□□□□□ -1.43
CASC4-210ENST00000559550 ORC1Q13415 861 aa6.11□□□□□ -1.43
CASC4-210ENST00000559550 SND1Q7KZF4 910 aaKnown RBP eCLIP6.11□□□□□ -1.43
CASC4-210ENST00000559550 MFSD14AQ96MC6 490 aa6.11□□□□□ -1.43
CASC4-210ENST00000559550 FBXL18Q96ME1 805 aa6.11□□□□□ -1.43
CASC4-210ENST00000559550 CITED4Q96RK1 184 aa6.11□□□□□ -1.43
CASC4-210ENST00000559550 SALL4Q9UJQ4 1053 aa6.11□□□□□ -1.43
CASC4-210ENST00000559550 DDX3YO15523 660 aaKnown RBP6.1□□□□□ -1.43
CASC4-210ENST00000559550 F13BP05160 661 aa6.1□□□□□ -1.43
CASC4-210ENST00000559550 POLR3DP05423 398 aaPredicted RBP6.1□□□□□ -1.43
CASC4-210ENST00000559550 PDE3BQ13370 1112 aa6.1□□□□□ -1.43
CASC4-210ENST00000559550 ZNF648Q5T619 568 aaPredicted RBP6.1□□□□□ -1.43
CASC4-210ENST00000559550 USPL1Q5W0Q7 1092 aa6.1□□□□□ -1.43
CASC4-210ENST00000559550 NCAPG2Q86XI2 1143 aa6.1□□□□□ -1.43
CASC4-210ENST00000559550 CEP120Q8N960 986 aa6.1□□□□□ -1.43
CASC4-210ENST00000559550 UBASH3BQ8TF42 649 aa6.1□□□□□ -1.43
CASC4-210ENST00000559550 CARD10Q9BWT7 1032 aa6.1□□□□□ -1.43
CASC4-210ENST00000559550 NIF3L1Q9GZT8 377 aa6.1□□□□□ -1.43
CASC4-210ENST00000559550 GZF1Q9H116 711 aaPredicted RBP6.1□□□□□ -1.43
CASC4-210ENST00000559550 RBSNQ9H1K0 784 aa6.1□□□□□ -1.43
CASC4-210ENST00000559550 RASSF4Q9H2L5 321 aa6.1□□□□□ -1.43
CASC4-210ENST00000559550 KCNF1Q9H3M0 494 aa6.1□□□□□ -1.43
CASC4-210ENST00000559550 ZFYVE28Q9HCC9 887 aa6.1□□□□□ -1.43
CASC4-210ENST00000559550 HIF3AQ9Y2N7 669 aa6.1□□□□□ -1.43
CASC4-210ENST00000559550 TRPA1O75762 1119 aa6.09□□□□□ -1.43
CASC4-210ENST00000559550 PAPLNO95428 1278 aa6.09□□□□□ -1.43
CASC4-210ENST00000559550 ZNF124Q15973 351 aa6.09□□□□□ -1.43
CASC4-210ENST00000559550 DUOXA2Q1HG44 320 aa6.09□□□□□ -1.43
CASC4-210ENST00000559550 VSIG10LQ86VR7 867 aa6.09□□□□□ -1.43
CASC4-210ENST00000559550 SHISA5Q8N114 240 aa6.09□□□□□ -1.43
CASC4-210ENST00000559550 KLHL23Q8NBE8 558 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms