RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 USP17L3A6NCW0 530 aa8.03□□□□□ -1.12
CHRNA3-204ENST00000559002 USP17L4A6NCW7 530 aa8.03□□□□□ -1.12
CHRNA3-204ENST00000559002 RAD17O75943 681 aa8.03□□□□□ -1.12
CHRNA3-204ENST00000559002 MCAMP43121 646 aa8.03□□□□□ -1.12
CHRNA3-204ENST00000559002 PRELPP51888 382 aa8.03□□□□□ -1.12
CHRNA3-204ENST00000559002 GTF2IP78347 998 aa8.03□□□□□ -1.12
CHRNA3-204ENST00000559002 CIAPIN1Q6FI81 312 aa8.03□□□□□ -1.12
CHRNA3-204ENST00000559002 USP17L1Q7RTZ2 530 aa8.03□□□□□ -1.12
CHRNA3-204ENST00000559002 ZGPATQ8N5A5 531 aaKnown RBP8.03□□□□□ -1.12
CHRNA3-204ENST00000559002 WDR66Q8TBY9 1149 aa8.03□□□□□ -1.12
CHRNA3-204ENST00000559002 TBC1D22AQ8WUA7 517 aa8.03□□□□□ -1.12
CHRNA3-204ENST00000559002 SNRKQ9NRH2 765 aa8.03□□□□□ -1.12
CHRNA3-204ENST00000559002 HMG20BQ9P0W2 317 aa8.03□□□□□ -1.12
CHRNA3-204ENST00000559002 JAG2Q9Y219 1238 aa8.03□□□□□ -1.12
CHRNA3-204ENST00000559002 PDS5AQ29RF7 1337 aaKnown RBP8.03□□□□□ -1.12
CHRNA3-204ENST00000559002 YDJCA8MPS7 323 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 GOLIM4O00461 696 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 ZAP70P43403 619 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 SCARF1Q14162 830 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 TNIP1Q15025 636 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 TTF1Q15361 905 aaPredicted RBP8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 MFSD14BQ5SR56 506 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 STRIP1Q5VSL9 837 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 TTLL5Q6EMB2 1281 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 PI16Q6UXB8 463 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 PI4K2BQ8TCG2 481 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 HAUS7Q99871 368 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 OSBPL3Q9H4L5 887 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 PAG1Q9NWQ8 432 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 ABCF2Q9UG63 623 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 GJA3Q9Y6H8 435 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 UTRNP46939 3433 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 FAM205AQ6ZU69 1335 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 MYO3BQ8WXR4 1341 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 ZC3H4Q9UPT8 1303 aaKnown RBP8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 COL4A5P29400 1685 aa8.02□□□□□ -1.13
CHRNA3-204ENST00000559002 COL1A1P02452 1464 aaPredicted RBP8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 TRIM6-TRIM34B2RNG4 842 aa8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 FZD9O00144 591 aa8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 PSMD14O00487 310 aa8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 ZBTB22O15209 634 aa8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 MAP4K4O95819 1239 aaPredicted RBP8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 CXCL9Q07325 125 aa8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 DACT2Q5SW24 774 aa8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 TTC22Q5TAA0 569 aa8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 SPTY2D1Q68D10 685 aaPredicted RBP8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 CNTROBQ8N137 903 aa8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 KCNQ5Q9NR82 932 aa8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 RAI14Q9P0K7 980 aa8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 LRP2BPQ9P2M1 347 aa8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 NDUFB9Q9Y6M9 179 aa8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 ZNF541Q9H0D2 1346 aa8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 SALL1Q9NSC2 1324 aa8.01□□□□□ -1.13
CHRNA3-204ENST00000559002 IDH1O75874 414 aaKnown RBP8□□□□□ -1.13
CHRNA3-204ENST00000559002 CYP2E1P05181 493 aaPredicted RBP8□□□□□ -1.13
CHRNA3-204ENST00000559002 LDHBP07195 334 aaKnown RBP8□□□□□ -1.13
CHRNA3-204ENST00000559002 VIL1P09327 827 aaKnown RBP8□□□□□ -1.13
CHRNA3-204ENST00000559002 FKBP1AP62942 108 aaKnown RBP8□□□□□ -1.13
CHRNA3-204ENST00000559002 MAP3K12Q12852 859 aa8□□□□□ -1.13
CHRNA3-204ENST00000559002 LRRFIP1Q32MZ4 808 aaKnown RBP8□□□□□ -1.13
CHRNA3-204ENST00000559002 DPY19L2Q6NUT2 758 aa8□□□□□ -1.13
CHRNA3-204ENST00000559002 RSBN1LQ6PCB5 846 aaPredicted RBP8□□□□□ -1.13
CHRNA3-204ENST00000559002 TBC1D9Q6ZT07 1266 aa8□□□□□ -1.13
CHRNA3-204ENST00000559002 ERICH6Q7L0X2 663 aa8□□□□□ -1.13
CHRNA3-204ENST00000559002 DZIP1Q86YF9 867 aaKnown RBP8□□□□□ -1.13
CHRNA3-204ENST00000559002 GPC2Q8N158 579 aa8□□□□□ -1.13
CHRNA3-204ENST00000559002 RILPL2Q969X0 211 aa8□□□□□ -1.13
CHRNA3-204ENST00000559002 EVI5LQ96CN4 794 aa8□□□□□ -1.13
CHRNA3-204ENST00000559002 EDC3Q96F86 508 aaKnown RBP8□□□□□ -1.13
CHRNA3-204ENST00000559002 FSD1Q9BTV5 496 aa8□□□□□ -1.13
CHRNA3-204ENST00000559002 DDX24Q9GZR7 859 aaKnown RBP eCLIP8□□□□□ -1.13
CHRNA3-204ENST00000559002 MAST3O60307 1309 aa8□□□□□ -1.13
CHRNA3-204ENST00000559002 F8W031 263 aaPredicted RBP7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 GSPT1P15170 499 aaKnown RBP7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 RPS12P25398 132 aaKnown RBP7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 PRDX5P30044 214 aa7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 GMPSP49915 693 aaPredicted RBP7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 ZSCAN25Q6NSZ9 544 aa7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 KIAA0825Q8IV33 1275 aa7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 TIAM2Q8IVF5 1701 aa7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 OGFOD1Q8N543 542 aa7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 CERS5Q8N5B7 392 aa7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 KBTBD3Q8NAB2 608 aa7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 AGBL3Q8NEM8 1001 aa7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 MXD3Q9BW11 206 aa7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 ANTXR1Q9H6X2 564 aa7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 PIH1D3Q9NQM4 214 aaKnown RBP7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 HDAC9Q9UKV0 1011 aa7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 TTF2Q9UNY4 1162 aaKnown RBP7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 SUGT1Q9Y2Z0 365 aa7.99□□□□□ -1.13
CHRNA3-204ENST00000559002 IGSF3O75054 1194 aa7.98□□□□□ -1.13
CHRNA3-204ENST00000559002 DDNO94850 711 aaPredicted RBP7.98□□□□□ -1.13
CHRNA3-204ENST00000559002 SDSP20132 328 aa7.98□□□□□ -1.13
CHRNA3-204ENST00000559002 LMOD1P29536 600 aaPredicted RBP7.98□□□□□ -1.13
CHRNA3-204ENST00000559002 GSTO1P78417 241 aa7.98□□□□□ -1.13
CHRNA3-204ENST00000559002 BMP2KLQ5H9B9 411 aa7.98□□□□□ -1.13
CHRNA3-204ENST00000559002 NAA16Q6N069 864 aaPredicted RBP7.98□□□□□ -1.13
CHRNA3-204ENST00000559002 SLF2Q8IX21 1173 aa7.98□□□□□ -1.13
CHRNA3-204ENST00000559002 ZBTB12Q9Y330 459 aaPredicted RBP7.98□□□□□ -1.13
CHRNA3-204ENST00000559002 RFX7Q2KHR2 1363 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms