RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 IREB2P48200 963 aaKnown RBP20.37■□□□□ 0.85
CDC42BPB-203ENST00000558867 CHRNDQ07001 517 aa20.37■□□□□ 0.85
CDC42BPB-203ENST00000558867 GCKRQ14397 625 aa20.37■□□□□ 0.85
CDC42BPB-203ENST00000558867 ZNF804AQ7Z570 1209 aa20.37■□□□□ 0.85
CDC42BPB-203ENST00000558867 TSPYL6Q8N831 410 aa20.37■□□□□ 0.85
CDC42BPB-203ENST00000558867 TWISTNBQ3B726 338 aaPredicted RBP20.36■□□□□ 0.85
CDC42BPB-203ENST00000558867 WNK4Q96J92 1243 aa20.36■□□□□ 0.85
CDC42BPB-203ENST00000558867 CSF1RP07333 972 aa20.35■□□□□ 0.85
CDC42BPB-203ENST00000558867 FKBP1AP62942 108 aaKnown RBP20.35■□□□□ 0.85
CDC42BPB-203ENST00000558867 ARHGEF6Q15052 776 aa20.35■□□□□ 0.85
CDC42BPB-203ENST00000558867 R3HDMLQ9H3Y0 253 aa20.35■□□□□ 0.85
CDC42BPB-203ENST00000558867 KLRK1P26718 216 aa20.34■□□□□ 0.85
CDC42BPB-203ENST00000558867 IFIT5Q13325 482 aaKnown RBP20.34■□□□□ 0.85
CDC42BPB-203ENST00000558867 FKBP5Q13451 457 aaPredicted RBP20.34■□□□□ 0.85
CDC42BPB-203ENST00000558867 C15orf52Q6ZUT6 534 aaKnown RBP20.34■□□□□ 0.85
CDC42BPB-203ENST00000558867 OTOP1Q7RTM1 612 aa20.34■□□□□ 0.85
CDC42BPB-203ENST00000558867 LINS1Q8NG48 757 aa20.34■□□□□ 0.85
CDC42BPB-203ENST00000558867 VEZTQ9HBM0 779 aa20.34■□□□□ 0.85
CDC42BPB-203ENST00000558867 ZNF646O15015 1829 aaPredicted RBP20.33■□□□□ 0.85
CDC42BPB-203ENST00000558867 RBM5P52756 815 aaKnown RBP eCLIP20.33■□□□□ 0.85
CDC42BPB-203ENST00000558867 TNFAIP1Q13829 316 aa20.33■□□□□ 0.85
CDC42BPB-203ENST00000558867 CFAP100Q494V2 611 aa20.33■□□□□ 0.85
CDC42BPB-203ENST00000558867 ANKRD13AQ8IZ07 590 aa20.33■□□□□ 0.85
CDC42BPB-203ENST00000558867 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.85
CDC42BPB-203ENST00000558867 DNAAF4Q8WXU2 420 aa20.33■□□□□ 0.85
CDC42BPB-203ENST00000558867 TSR2Q969E8 191 aaKnown RBP20.33■□□□□ 0.85
CDC42BPB-203ENST00000558867 ZBED9Q6R2W3 1325 aa20.32■□□□□ 0.84
CDC42BPB-203ENST00000558867 FLIIQ13045 1269 aa20.32■□□□□ 0.84
CDC42BPB-203ENST00000558867 CHMP3Q9Y3E7 222 aa20.32■□□□□ 0.84
CDC42BPB-203ENST00000558867 CLRN2A0PK11 232 aa20.31■□□□□ 0.84
CDC42BPB-203ENST00000558867 SPDYE2BA6NHP3 402 aa20.31■□□□□ 0.84
CDC42BPB-203ENST00000558867 F8W031 263 aaPredicted RBP20.31■□□□□ 0.84
CDC42BPB-203ENST00000558867 SPDYE6P0CI01 402 aa20.31■□□□□ 0.84
CDC42BPB-203ENST00000558867 IL1R1P14778 569 aa20.31■□□□□ 0.84
CDC42BPB-203ENST00000558867 HNRNPUQ00839 825 aaKnown RBP eCLIP20.31■□□□□ 0.84
CDC42BPB-203ENST00000558867 CCDC27Q2M243 656 aa20.31■□□□□ 0.84
CDC42BPB-203ENST00000558867 G2E3Q7L622 706 aa20.31■□□□□ 0.84
CDC42BPB-203ENST00000558867 EFCC1Q9HA90 598 aa20.31■□□□□ 0.84
CDC42BPB-203ENST00000558867 FZD1Q9UP38 647 aa20.31■□□□□ 0.84
CDC42BPB-203ENST00000558867 IGF2BP3O00425 579 aaKnown RBP eCLIP20.3■□□□□ 0.84
CDC42BPB-203ENST00000558867 TAF5LO75529 589 aa20.3■□□□□ 0.84
CDC42BPB-203ENST00000558867 WDHD1O75717 1129 aaPredicted RBP20.3■□□□□ 0.84
CDC42BPB-203ENST00000558867 SP3Q02447 781 aa20.3■□□□□ 0.84
CDC42BPB-203ENST00000558867 TAF7LQ5H9L4 462 aa20.3■□□□□ 0.84
CDC42BPB-203ENST00000558867 CLMNQ96JQ2 1002 aa20.3■□□□□ 0.84
CDC42BPB-203ENST00000558867 PTPN22Q9Y2R2 807 aa20.3■□□□□ 0.84
CDC42BPB-203ENST00000558867 CASP7P55210 303 aa20.29■□□□□ 0.84
CDC42BPB-203ENST00000558867 CERS5Q8N5B7 392 aa20.29■□□□□ 0.84
CDC42BPB-203ENST00000558867 PRMT6Q96LA8 375 aaPredicted RBP20.29■□□□□ 0.84
CDC42BPB-203ENST00000558867 TMEM106CQ9BVX2 250 aa20.29■□□□□ 0.84
CDC42BPB-203ENST00000558867 ECM29Q5VYK3 1845 aa20.28■□□□□ 0.84
CDC42BPB-203ENST00000558867 CRHR2Q13324 411 aa20.28■□□□□ 0.84
CDC42BPB-203ENST00000558867 RASA3Q14644 834 aa20.28■□□□□ 0.84
CDC42BPB-203ENST00000558867 CCDC57Q2TAC2 916 aa20.28■□□□□ 0.84
CDC42BPB-203ENST00000558867 NBPF12Q5TAG4 269 aaPredicted RBP20.28■□□□□ 0.84
CDC42BPB-203ENST00000558867 NBPF11Q86T75 865 aa20.28■□□□□ 0.84
CDC42BPB-203ENST00000558867 HELBQ8NG08 1087 aaPredicted RBP20.28■□□□□ 0.84
CDC42BPB-203ENST00000558867 CD99L2Q8TCZ2 262 aa20.28■□□□□ 0.84
CDC42BPB-203ENST00000558867 IL16Q14005 1332 aa20.27■□□□□ 0.84
CDC42BPB-203ENST00000558867 USP2O75604 605 aaPredicted RBP20.27■□□□□ 0.84
CDC42BPB-203ENST00000558867 TESPA1A2RU30 521 aaPredicted RBP20.26■□□□□ 0.83
CDC42BPB-203ENST00000558867 POTEFA5A3E0 1075 aa20.26■□□□□ 0.83
CDC42BPB-203ENST00000558867 TNNI2P48788 182 aa20.26■□□□□ 0.83
CDC42BPB-203ENST00000558867 HABP4Q5JVS0 413 aaKnown RBP20.26■□□□□ 0.83
CDC42BPB-203ENST00000558867 LDHAL6AQ6ZMR3 332 aa20.26■□□□□ 0.83
CDC42BPB-203ENST00000558867 WWC1Q8IX03 1113 aa20.26■□□□□ 0.83
CDC42BPB-203ENST00000558867 ARMC5Q96C12 935 aa20.26■□□□□ 0.83
CDC42BPB-203ENST00000558867 CNNM1Q9NRU3 951 aa20.26■□□□□ 0.83
CDC42BPB-203ENST00000558867 PLIN1O60240 522 aa20.25■□□□□ 0.83
CDC42BPB-203ENST00000558867 ZFYVE28Q9HCC9 887 aa20.25■□□□□ 0.83
CDC42BPB-203ENST00000558867 SERPINA10Q9UK55 444 aa20.25■□□□□ 0.83
CDC42BPB-203ENST00000558867 SSC5DA1L4H1 1573 aa20.25■□□□□ 0.83
CDC42BPB-203ENST00000558867 IRS2Q9Y4H2 1338 aa20.25■□□□□ 0.83
CDC42BPB-203ENST00000558867 SNAP23O00161 211 aa20.24■□□□□ 0.83
CDC42BPB-203ENST00000558867 GTF2A2P52657 109 aa20.24■□□□□ 0.83
CDC42BPB-203ENST00000558867 NCBP3Q53F19 620 aaKnown RBP20.24■□□□□ 0.83
CDC42BPB-203ENST00000558867 OPTNQ96CV9 577 aa20.24■□□□□ 0.83
CDC42BPB-203ENST00000558867 ELP3Q9H9T3 547 aa20.24■□□□□ 0.83
CDC42BPB-203ENST00000558867 PCDHAC2Q9Y5I4 1007 aa20.24■□□□□ 0.83
CDC42BPB-203ENST00000558867 CACNA1FO60840 1977 aa20.24■□□□□ 0.83
CDC42BPB-203ENST00000558867 FOXO4P98177 505 aa20.23■□□□□ 0.83
CDC42BPB-203ENST00000558867 MFSD14BQ5SR56 506 aa20.23■□□□□ 0.83
CDC42BPB-203ENST00000558867 LMBR1LQ6UX01 489 aa20.23■□□□□ 0.83
CDC42BPB-203ENST00000558867 ZNF70Q9UC06 446 aaPredicted RBP20.23■□□□□ 0.83
CDC42BPB-203ENST00000558867 TTF2Q9UNY4 1162 aaKnown RBP20.23■□□□□ 0.83
CDC42BPB-203ENST00000558867 CSADQ9Y600 493 aa20.23■□□□□ 0.83
CDC42BPB-203ENST00000558867 LAMB1P07942 1786 aa20.23■□□□□ 0.83
CDC42BPB-203ENST00000558867 FAM205AQ6ZU69 1335 aa20.23■□□□□ 0.83
CDC42BPB-203ENST00000558867 GJA5P36382 358 aa20.22■□□□□ 0.83
CDC42BPB-203ENST00000558867 UBE4AQ14139 1066 aa20.22■□□□□ 0.83
CDC42BPB-203ENST00000558867 TAF1CQ15572 869 aaPredicted RBP20.22■□□□□ 0.83
CDC42BPB-203ENST00000558867 SPDYE2Q495Y8 402 aa20.22■□□□□ 0.83
CDC42BPB-203ENST00000558867 SLC9C1Q4G0N8 1177 aa20.22■□□□□ 0.83
CDC42BPB-203ENST00000558867 JAG2Q9Y219 1238 aa20.22■□□□□ 0.83
CDC42BPB-203ENST00000558867 KIAA0100Q14667 2235 aaKnown RBP20.22■□□□□ 0.83
CDC42BPB-203ENST00000558867 HIBADHP31937 336 aaKnown RBP20.21■□□□□ 0.83
CDC42BPB-203ENST00000558867 MAP3K9P80192 1104 aa20.21■□□□□ 0.83
CDC42BPB-203ENST00000558867 KIF22Q14807 665 aa20.21■□□□□ 0.83
CDC42BPB-203ENST00000558867 PTPN18Q99952 460 aa20.21■□□□□ 0.83
CDC42BPB-203ENST00000558867 C9orf78Q9NZ63 289 aaPredicted RBP20.21■□□□□ 0.83
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