RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 CRAMP1Q96RY5 1269 aa15.54■□□□□ 0.08
SMAD3-207ENST00000558763 ZSWIM6Q9HCJ5 1215 aa15.54■□□□□ 0.08
SMAD3-207ENST00000558763 HELLSQ9NRZ9 838 aa15.54■□□□□ 0.08
SMAD3-207ENST00000558763 BSDC1Q9NW68 430 aaPredicted RBP15.54■□□□□ 0.08
SMAD3-207ENST00000558763 KIAA1551Q9HCM1 1747 aa15.54■□□□□ 0.08
SMAD3-207ENST00000558763 RNF113AO15541 343 aaKnown RBP15.53■□□□□ 0.08
SMAD3-207ENST00000558763 TSGA10IPQ3SY00 556 aa15.53■□□□□ 0.08
SMAD3-207ENST00000558763 WWC3Q9ULE0 1092 aa15.53■□□□□ 0.08
SMAD3-207ENST00000558763 HSP90AA1P07900 732 aaKnown RBP15.53■□□□□ 0.08
SMAD3-207ENST00000558763 DPEP1P16444 411 aa15.53■□□□□ 0.08
SMAD3-207ENST00000558763 CHRNDQ07001 517 aa15.53■□□□□ 0.08
SMAD3-207ENST00000558763 STYK1Q6J9G0 422 aa15.53■□□□□ 0.08
SMAD3-207ENST00000558763 M0R2C6 588 aa15.52■□□□□ 0.07
SMAD3-207ENST00000558763 PPEF1O14829 653 aaPredicted RBP15.52■□□□□ 0.07
SMAD3-207ENST00000558763 FOXP2O15409 715 aa15.52■□□□□ 0.07
SMAD3-207ENST00000558763 CYP2E1P05181 493 aaPredicted RBP15.52■□□□□ 0.07
SMAD3-207ENST00000558763 CASTP20810 708 aaKnown RBP15.52■□□□□ 0.07
SMAD3-207ENST00000558763 ALDH1B1P30837 517 aa15.52■□□□□ 0.07
SMAD3-207ENST00000558763 VPS53Q5VIR6 699 aa15.52■□□□□ 0.07
SMAD3-207ENST00000558763 OSBP2Q969R2 916 aa15.52■□□□□ 0.07
SMAD3-207ENST00000558763 MINPP1Q9UNW1 487 aa15.52■□□□□ 0.07
SMAD3-207ENST00000558763 AK2P54819 239 aa15.51■□□□□ 0.07
SMAD3-207ENST00000558763 RUFY3Q7L099 469 aa15.51■□□□□ 0.07
SMAD3-207ENST00000558763 JAKMIP1Q96N16 626 aaKnown RBP15.51■□□□□ 0.07
SMAD3-207ENST00000558763 BBOX1O75936 387 aa15.51■□□□□ 0.07
SMAD3-207ENST00000558763 TNPO1Q92973 898 aaKnown RBP15.51■□□□□ 0.07
SMAD3-207ENST00000558763 HMG20BQ9P0W2 317 aa15.51■□□□□ 0.07
SMAD3-207ENST00000558763 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
SMAD3-207ENST00000558763 CD2APQ9Y5K6 639 aa15.51■□□□□ 0.07
SMAD3-207ENST00000558763 SLX4Q8IY92 1834 aa15.51■□□□□ 0.07
SMAD3-207ENST00000558763 SLC5A1P13866 664 aa15.5■□□□□ 0.07
SMAD3-207ENST00000558763 KCNA3P22001 575 aa15.5■□□□□ 0.07
SMAD3-207ENST00000558763 TGFB2P61812 414 aa15.5■□□□□ 0.07
SMAD3-207ENST00000558763 OLFM4Q6UX06 510 aa15.5■□□□□ 0.07
SMAD3-207ENST00000558763 NOL8Q76FK4 1167 aaKnown RBP15.5■□□□□ 0.07
SMAD3-207ENST00000558763 DSCC1Q9BVC3 393 aa15.5■□□□□ 0.07
SMAD3-207ENST00000558763 PIH1D3Q9NQM4 214 aaKnown RBP15.5■□□□□ 0.07
SMAD3-207ENST00000558763 LRRC37AA6NMS7 1700 aa15.5■□□□□ 0.07
SMAD3-207ENST00000558763 WTIPA6NIX2 430 aaPredicted RBP15.49■□□□□ 0.07
SMAD3-207ENST00000558763 CYP21A2P08686 494 aa15.49■□□□□ 0.07
SMAD3-207ENST00000558763 ZKSCAN1P17029 563 aaPredicted RBP15.49■□□□□ 0.07
SMAD3-207ENST00000558763 KCNJ4P48050 445 aa15.49■□□□□ 0.07
SMAD3-207ENST00000558763 PKP1Q13835 747 aa15.49■□□□□ 0.07
SMAD3-207ENST00000558763 RASGRF1Q13972 1273 aa15.49■□□□□ 0.07
SMAD3-207ENST00000558763 NLGN2Q8NFZ4 835 aa15.49■□□□□ 0.07
SMAD3-207ENST00000558763 CNKSR1Q969H4 720 aa15.49■□□□□ 0.07
SMAD3-207ENST00000558763 U3KPZ7 1027 aaPredicted RBP15.49■□□□□ 0.07
SMAD3-207ENST00000558763 ZFYP08048 801 aaPredicted RBP15.49■□□□□ 0.07
SMAD3-207ENST00000558763 UQCRFS1P1P0C7P4 283 aa15.49■□□□□ 0.07
SMAD3-207ENST00000558763 HSPD1P10809 573 aaKnown RBP15.49■□□□□ 0.07
SMAD3-207ENST00000558763 INTS4Q96HW7 963 aaKnown RBP15.49■□□□□ 0.07
SMAD3-207ENST00000558763 ANKIB1Q9P2G1 1089 aa15.49■□□□□ 0.07
SMAD3-207ENST00000558763 ZNF804BA4D1E1 1349 aa15.49■□□□□ 0.07
SMAD3-207ENST00000558763 COL1A1P02452 1464 aaPredicted RBP15.49■□□□□ 0.07
SMAD3-207ENST00000558763 UTRNP46939 3433 aa15.48■□□□□ 0.07
SMAD3-207ENST00000558763 LARGE1O95461 756 aa15.48■□□□□ 0.07
SMAD3-207ENST00000558763 MCM4P33991 863 aa15.48■□□□□ 0.07
SMAD3-207ENST00000558763 RNF20Q5VTR2 975 aa15.48■□□□□ 0.07
SMAD3-207ENST00000558763 FHDC1Q9C0D6 1143 aaPredicted RBP15.48■□□□□ 0.07
SMAD3-207ENST00000558763 PUS7LQ9H0K6 701 aaKnown RBP15.48■□□□□ 0.07
SMAD3-207ENST00000558763 CWC22Q9HCG8 908 aaKnown RBP15.48■□□□□ 0.07
SMAD3-207ENST00000558763 ATP6V0A2Q9Y487 856 aa15.48■□□□□ 0.07
SMAD3-207ENST00000558763 ADD2P35612 726 aa15.47■□□□□ 0.07
SMAD3-207ENST00000558763 BRCA1P38398 1863 aaKnown RBP15.47■□□□□ 0.07
SMAD3-207ENST00000558763 STOX1Q6ZVD7 989 aa15.47■□□□□ 0.07
SMAD3-207ENST00000558763 TTLL6Q8N841 843 aa15.47■□□□□ 0.07
SMAD3-207ENST00000558763 APPBP2Q92624 585 aa15.47■□□□□ 0.07
SMAD3-207ENST00000558763 NSFL1CQ9UNZ2 370 aaKnown RBP15.47■□□□□ 0.07
SMAD3-207ENST00000558763 ZDHHC9Q9Y397 364 aa15.47■□□□□ 0.07
SMAD3-207ENST00000558763 CYP46A1Q9Y6A2 500 aa15.47■□□□□ 0.07
SMAD3-207ENST00000558763 TCRBV5S4A2TA0A5A2 114 aa15.47■□□□□ 0.07
SMAD3-207ENST00000558763 BCAMP50895 628 aa15.47■□□□□ 0.07
SMAD3-207ENST00000558763 GPSM2P81274 684 aa15.47■□□□□ 0.07
SMAD3-207ENST00000558763 ST3GAL1Q11201 340 aa15.47■□□□□ 0.07
SMAD3-207ENST00000558763 CLEC17AQ6ZS10 378 aa15.47■□□□□ 0.07
SMAD3-207ENST00000558763 TMC4Q7Z404 712 aa15.47■□□□□ 0.07
SMAD3-207ENST00000558763 ANKRD2Q9GZV1 360 aa15.47■□□□□ 0.07
SMAD3-207ENST00000558763 PDRG1Q9NUG6 133 aa15.47■□□□□ 0.07
SMAD3-207ENST00000558763 PIM2Q9P1W9 311 aa15.47■□□□□ 0.07
SMAD3-207ENST00000558763 XDHP47989 1333 aa15.46■□□□□ 0.07
SMAD3-207ENST00000558763 SP8Q8IXZ3 490 aa15.46■□□□□ 0.07
SMAD3-207ENST00000558763 SPATA5Q8NB90 893 aa15.46■□□□□ 0.07
SMAD3-207ENST00000558763 LARP6Q9BRS8 491 aaKnown RBP15.46■□□□□ 0.07
SMAD3-207ENST00000558763 TMX4Q9H1E5 349 aaPredicted RBP15.46■□□□□ 0.07
SMAD3-207ENST00000558763 ALDH8A1Q9H2A2 487 aaPredicted RBP15.46■□□□□ 0.07
SMAD3-207ENST00000558763 LIMCH1Q9UPQ0 1083 aa15.46■□□□□ 0.07
SMAD3-207ENST00000558763 MYH13Q9UKX3 1938 aa15.46■□□□□ 0.06
SMAD3-207ENST00000558763 C21orf2O43822 256 aa15.45■□□□□ 0.06
SMAD3-207ENST00000558763 RPS6KB1P23443 525 aa15.45■□□□□ 0.06
SMAD3-207ENST00000558763 TTF1Q15361 905 aaPredicted RBP15.45■□□□□ 0.06
SMAD3-207ENST00000558763 LRRFIP1Q32MZ4 808 aaKnown RBP15.45■□□□□ 0.06
SMAD3-207ENST00000558763 LTBP1Q14766 1721 aa15.45■□□□□ 0.06
SMAD3-207ENST00000558763 PDE6AP16499 860 aa15.45■□□□□ 0.06
SMAD3-207ENST00000558763 PSMA5P28066 241 aa15.45■□□□□ 0.06
SMAD3-207ENST00000558763 UBE4AQ14139 1066 aa15.45■□□□□ 0.06
SMAD3-207ENST00000558763 UBE3CQ15386 1083 aa15.45■□□□□ 0.06
SMAD3-207ENST00000558763 GPR101Q96P66 508 aaPredicted RBP15.45■□□□□ 0.06
SMAD3-207ENST00000558763 IRS2Q9Y4H2 1338 aa15.44■□□□□ 0.06
SMAD3-207ENST00000558763 UFL1O94874 794 aa15.44■□□□□ 0.06
SMAD3-207ENST00000558763 KLRK1P26718 216 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms