RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 USP17L8P0C7I0 530 aa17.17■□□□□ 0.34
TSPAN3-205ENST00000558745 ADORA1P30542 326 aa17.17■□□□□ 0.34
TSPAN3-205ENST00000558745 G3BP1Q13283 466 aaKnown RBP eCLIP17.17■□□□□ 0.34
TSPAN3-205ENST00000558745 PDE3AQ14432 1141 aa17.17■□□□□ 0.34
TSPAN3-205ENST00000558745 ATP2B3Q16720 1220 aa17.17■□□□□ 0.34
TSPAN3-205ENST00000558745 VPS37DQ86XT2 251 aa17.17■□□□□ 0.34
TSPAN3-205ENST00000558745 KIAA0825Q8IV33 1275 aa17.17■□□□□ 0.34
TSPAN3-205ENST00000558745 LPIN2Q92539 896 aa17.17■□□□□ 0.34
TSPAN3-205ENST00000558745 ZBTB40Q9NUA8 1239 aa17.17■□□□□ 0.34
TSPAN3-205ENST00000558745 F8W031 263 aaPredicted RBP17.16■□□□□ 0.34
TSPAN3-205ENST00000558745 SURF6O75683 361 aaKnown RBP17.16■□□□□ 0.34
TSPAN3-205ENST00000558745 SASH1O94885 1247 aa17.16■□□□□ 0.34
TSPAN3-205ENST00000558745 IFIT1P09914 478 aaKnown RBP17.16■□□□□ 0.34
TSPAN3-205ENST00000558745 SLC5A1P13866 664 aa17.16■□□□□ 0.34
TSPAN3-205ENST00000558745 CHAF1AQ13111 956 aaPredicted RBP17.16■□□□□ 0.34
TSPAN3-205ENST00000558745 ADAMTSL1Q8N6G6 1762 aa17.16■□□□□ 0.34
TSPAN3-205ENST00000558745 TRAF5O00463 557 aa17.15■□□□□ 0.34
TSPAN3-205ENST00000558745 RRP1P56182 461 aaKnown RBP17.15■□□□□ 0.34
TSPAN3-205ENST00000558745 ZNF280AP59817 542 aaPredicted RBP17.15■□□□□ 0.34
TSPAN3-205ENST00000558745 GRIK5Q16478 980 aa17.15■□□□□ 0.34
TSPAN3-205ENST00000558745 KIF4BQ2VIQ3 1234 aa17.15■□□□□ 0.34
TSPAN3-205ENST00000558745 CAVIN4Q5BKX8 364 aa17.15■□□□□ 0.34
TSPAN3-205ENST00000558745 SCAF8Q9UPN6 1271 aaKnown RBP17.15■□□□□ 0.34
TSPAN3-205ENST00000558745 PCDHAC2Q9Y5I4 1007 aa17.15■□□□□ 0.34
TSPAN3-205ENST00000558745 ZNF646O15015 1829 aaPredicted RBP17.14■□□□□ 0.33
TSPAN3-205ENST00000558745 PSME4Q14997 1843 aa17.14■□□□□ 0.33
TSPAN3-205ENST00000558745 SIRT2Q8IXJ6 389 aa17.14■□□□□ 0.33
TSPAN3-205ENST00000558745 GLIS2Q9BZE0 524 aaPredicted RBP17.14■□□□□ 0.33
TSPAN3-205ENST00000558745 MYOZ2Q9NPC6 264 aa17.14■□□□□ 0.33
TSPAN3-205ENST00000558745 FAM205AQ6ZU69 1335 aa17.13■□□□□ 0.33
TSPAN3-205ENST00000558745 PASKQ96RG2 1323 aa17.13■□□□□ 0.33
TSPAN3-205ENST00000558745 FRAT2O75474 233 aaPredicted RBP17.13■□□□□ 0.33
TSPAN3-205ENST00000558745 OS9Q13438 667 aaPredicted RBP17.13■□□□□ 0.33
TSPAN3-205ENST00000558745 SCARF1Q14162 830 aa17.13■□□□□ 0.33
TSPAN3-205ENST00000558745 NEUROD6Q96NK8 337 aa17.13■□□□□ 0.33
TSPAN3-205ENST00000558745 PGAP2Q9UHJ9 254 aa17.13■□□□□ 0.33
TSPAN3-205ENST00000558745 A0A1B0GUL7 405 aa17.12■□□□□ 0.33
TSPAN3-205ENST00000558745 PHKA1P46020 1223 aa17.12■□□□□ 0.33
TSPAN3-205ENST00000558745 NBPF9Q3BBW0 867 aa17.12■□□□□ 0.33
TSPAN3-205ENST00000558745 MFSD14BQ5SR56 506 aa17.12■□□□□ 0.33
TSPAN3-205ENST00000558745 USP48Q86UV5 1035 aa17.12■□□□□ 0.33
TSPAN3-205ENST00000558745 EXOC6BQ9Y2D4 811 aa17.12■□□□□ 0.33
TSPAN3-205ENST00000558745 XAGE2Q96GT9 111 aa17.11■□□□□ 0.33
TSPAN3-205ENST00000558745 NOP58Q9Y2X3 529 aaKnown RBP17.11■□□□□ 0.33
TSPAN3-205ENST00000558745 MYO3BQ8WXR4 1341 aa17.1■□□□□ 0.33
TSPAN3-205ENST00000558745 POLR2AP24928 1970 aaKnown RBP17.1■□□□□ 0.33
TSPAN3-205ENST00000558745 ANGEL2Q5VTE6 544 aaKnown RBP17.1■□□□□ 0.33
TSPAN3-205ENST00000558745 CCDC102BQ68D86 513 aa17.1■□□□□ 0.33
TSPAN3-205ENST00000558745 RPAP2Q8IXW5 612 aaPredicted RBP17.1■□□□□ 0.33
TSPAN3-205ENST00000558745 OGFOD1Q8N543 542 aa17.1■□□□□ 0.33
TSPAN3-205ENST00000558745 ZC3H15Q8WU90 426 aaKnown RBP17.1■□□□□ 0.33
TSPAN3-205ENST00000558745 AKAP2Q9Y2D5 859 aa17.1■□□□□ 0.33
TSPAN3-205ENST00000558745 ZNF609O15014 1411 aa17.1■□□□□ 0.33
TSPAN3-205ENST00000558745 AOX1Q06278 1338 aa17.09■□□□□ 0.33
TSPAN3-205ENST00000558745 ADM5C9JUS6 153 aa17.09■□□□□ 0.33
TSPAN3-205ENST00000558745 APBB1O00213 710 aa17.09■□□□□ 0.33
TSPAN3-205ENST00000558745 WNT10BO00744 389 aa17.09■□□□□ 0.33
TSPAN3-205ENST00000558745 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
TSPAN3-205ENST00000558745 BCL11AQ9H165 835 aa17.09■□□□□ 0.33
TSPAN3-205ENST00000558745 GGA3Q9NZ52 723 aa17.09■□□□□ 0.33
TSPAN3-205ENST00000558745 FKBP1AP62942 108 aaKnown RBP17.08■□□□□ 0.32
TSPAN3-205ENST00000558745 CFAP100Q494V2 611 aa17.08■□□□□ 0.32
TSPAN3-205ENST00000558745 HDAC9Q9UKV0 1011 aa17.08■□□□□ 0.32
TSPAN3-205ENST00000558745 TTF2Q9UNY4 1162 aaKnown RBP17.08■□□□□ 0.32
TSPAN3-205ENST00000558745 COL1A1P02452 1464 aaPredicted RBP17.08■□□□□ 0.32
TSPAN3-205ENST00000558745 TNNI3KQ59H18 835 aa17.07■□□□□ 0.32
TSPAN3-205ENST00000558745 PRAMEF18Q5VWM3 479 aa17.07■□□□□ 0.32
TSPAN3-205ENST00000558745 CST9Q5W186 159 aa17.07■□□□□ 0.32
TSPAN3-205ENST00000558745 CDC37L1Q7L3B6 337 aa17.07■□□□□ 0.32
TSPAN3-205ENST00000558745 DCPSQ96C86 337 aaKnown RBP17.07■□□□□ 0.32
TSPAN3-205ENST00000558745 PRMT6Q96LA8 375 aaPredicted RBP17.07■□□□□ 0.32
TSPAN3-205ENST00000558745 DBNDD2Q9BQY9 259 aa17.07■□□□□ 0.32
TSPAN3-205ENST00000558745 CCDC8Q9H0W5 538 aaPredicted RBP17.07■□□□□ 0.32
TSPAN3-205ENST00000558745 ZNF408Q9H9D4 720 aa17.07■□□□□ 0.32
TSPAN3-205ENST00000558745 FPGT-TNNI3KV9GXZ4 949 aa17.07■□□□□ 0.32
TSPAN3-205ENST00000558745 RBM5P52756 815 aaKnown RBP eCLIP17.06■□□□□ 0.32
TSPAN3-205ENST00000558745 KRT26Q7Z3Y9 468 aa17.06■□□□□ 0.32
TSPAN3-205ENST00000558745 EAF2Q96CJ1 260 aaPredicted RBP17.06■□□□□ 0.32
TSPAN3-205ENST00000558745 ZBED3Q96IU2 234 aaPredicted RBP17.06■□□□□ 0.32
TSPAN3-205ENST00000558745 CHMP4BQ9H444 224 aaKnown RBP17.06■□□□□ 0.32
TSPAN3-205ENST00000558745 PRDM10Q9NQV6 1147 aa17.06■□□□□ 0.32
TSPAN3-205ENST00000558745 GNL3LQ9NVN8 582 aaKnown RBP17.06■□□□□ 0.32
TSPAN3-205ENST00000558745 SUPT16HQ9Y5B9 1047 aaKnown RBP17.06■□□□□ 0.32
TSPAN3-205ENST00000558745 TMEM88BA6NKF7 163 aa17.05■□□□□ 0.32
TSPAN3-205ENST00000558745 RASGRF1Q13972 1273 aa17.05■□□□□ 0.32
TSPAN3-205ENST00000558745 DLGAP5Q15398 846 aa17.05■□□□□ 0.32
TSPAN3-205ENST00000558745 GORABQ5T7V8 394 aa17.05■□□□□ 0.32
TSPAN3-205ENST00000558745 PI16Q6UXB8 463 aa17.05■□□□□ 0.32
TSPAN3-205ENST00000558745 IL1RAPL2Q9NP60 686 aa17.05■□□□□ 0.32
TSPAN3-205ENST00000558745 TLR7Q9NYK1 1049 aaKnown RBP17.05■□□□□ 0.32
TSPAN3-205ENST00000558745 PCDHB15Q9Y5E8 787 aa17.05■□□□□ 0.32
TSPAN3-205ENST00000558745 CLRN2A0PK11 232 aa17.04■□□□□ 0.32
TSPAN3-205ENST00000558745 CELF2O95319 508 aaKnown RBP17.04■□□□□ 0.32
TSPAN3-205ENST00000558745 MKRN1Q9UHC7 482 aaKnown RBP17.04■□□□□ 0.32
TSPAN3-205ENST00000558745 HMMRO75330 724 aa17.03■□□□□ 0.32
TSPAN3-205ENST00000558745 CRKP46108 304 aa17.03■□□□□ 0.32
TSPAN3-205ENST00000558745 SULF1Q8IWU6 871 aa17.03■□□□□ 0.32
TSPAN3-205ENST00000558745 WDR66Q8TBY9 1149 aa17.03■□□□□ 0.32
TSPAN3-205ENST00000558745 RHPN1Q8TCX5 695 aa17.03■□□□□ 0.32
TSPAN3-205ENST00000558745 TBC1D22AQ8WUA7 517 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms