RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 PTGIRP43119 386 aa13.58□□□□□ -0.24
MARK3-213ENST00000558611 Q6ZVU0 165 aa13.58□□□□□ -0.24
MARK3-213ENST00000558611 PMFBP1Q8TBY8 1022 aa13.58□□□□□ -0.24
MARK3-213ENST00000558611 NUDT16Q96DE0 195 aaKnown RBP13.58□□□□□ -0.24
MARK3-213ENST00000558611 NIFKQ9BYG3 293 aaKnown RBP13.58□□□□□ -0.24
MARK3-213ENST00000558611 DNAJC25Q9H1X3 360 aa13.58□□□□□ -0.24
MARK3-213ENST00000558611 CCSER2Q9H7U1 834 aa13.58□□□□□ -0.24
MARK3-213ENST00000558611 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.58□□□□□ -0.24
MARK3-213ENST00000558611 SBNO1A3KN83 1393 aa13.58□□□□□ -0.24
MARK3-213ENST00000558611 SBNO2Q9Y2G9 1366 aa13.58□□□□□ -0.24
MARK3-213ENST00000558611 PLCH1Q4KWH8 1693 aa13.57□□□□□ -0.24
MARK3-213ENST00000558611 MEX3CQ5U5Q3 659 aaKnown RBP13.57□□□□□ -0.24
MARK3-213ENST00000558611 ILDR2Q71H61 639 aa13.57□□□□□ -0.24
MARK3-213ENST00000558611 KRT28Q7Z3Y7 464 aa13.57□□□□□ -0.24
MARK3-213ENST00000558611 CRELD1Q96HD1 420 aa13.57□□□□□ -0.24
MARK3-213ENST00000558611 NLRP3Q96P20 1036 aa13.57□□□□□ -0.24
MARK3-213ENST00000558611 CARD11Q9BXL7 1154 aa13.57□□□□□ -0.24
MARK3-213ENST00000558611 HCSTQ9UBK5 93 aa13.57□□□□□ -0.24
MARK3-213ENST00000558611 SPATA31A3Q5VYP0 1347 aa13.57□□□□□ -0.24
MARK3-213ENST00000558611 MON2Q7Z3U7 1717 aa13.56□□□□□ -0.24
MARK3-213ENST00000558611 TREML1Q86YW5 311 aa13.56□□□□□ -0.24
MARK3-213ENST00000558611 ZSCAN10Q96SZ4 725 aaPredicted RBP13.56□□□□□ -0.24
MARK3-213ENST00000558611 RGS17Q9UGC6 210 aaPredicted RBP13.56□□□□□ -0.24
MARK3-213ENST00000558611 NWD2Q9ULI1 1742 aa13.56□□□□□ -0.24
MARK3-213ENST00000558611 PPIP5K1Q6PFW1 1433 aa13.56□□□□□ -0.24
MARK3-213ENST00000558611 NRKQ7Z2Y5 1582 aa13.55□□□□□ -0.24
MARK3-213ENST00000558611 EIF1AYO14602 144 aaKnown RBP13.55□□□□□ -0.24
MARK3-213ENST00000558611 NNTQ13423 1086 aa13.55□□□□□ -0.24
MARK3-213ENST00000558611 TANGO6Q9C0B7 1094 aa13.55□□□□□ -0.24
MARK3-213ENST00000558611 NLRP2Q9NX02 1062 aa13.55□□□□□ -0.24
MARK3-213ENST00000558611 PARP3Q9Y6F1 533 aa13.55□□□□□ -0.24
MARK3-213ENST00000558611 POLR3AO14802 1390 aaPredicted RBP13.55□□□□□ -0.24
MARK3-213ENST00000558611 ARHGEF10O15013 1369 aa13.55□□□□□ -0.24
MARK3-213ENST00000558611 CBLBQ13191 982 aa13.54□□□□□ -0.24
MARK3-213ENST00000558611 HIF1AQ16665 826 aa13.54□□□□□ -0.24
MARK3-213ENST00000558611 TTC16Q8NEE8 873 aa13.54□□□□□ -0.24
MARK3-213ENST00000558611 RHBDD1Q8TEB9 315 aa13.54□□□□□ -0.24
MARK3-213ENST00000558611 SPG7Q9UQ90 795 aa13.54□□□□□ -0.24
MARK3-213ENST00000558611 EVC2Q86UK5 1308 aa13.54□□□□□ -0.24
MARK3-213ENST00000558611 MEN1O00255 615 aa13.53□□□□□ -0.24
MARK3-213ENST00000558611 GTF2E1P29083 439 aaPredicted RBP13.53□□□□□ -0.24
MARK3-213ENST00000558611 ORC1Q13415 861 aa13.53□□□□□ -0.24
MARK3-213ENST00000558611 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
MARK3-213ENST00000558611 GPR152Q8TDT2 470 aa13.53□□□□□ -0.24
MARK3-213ENST00000558611 EMID1Q96A84 441 aaPredicted RBP13.53□□□□□ -0.24
MARK3-213ENST00000558611 SPATA32Q96LK8 384 aa13.53□□□□□ -0.24
MARK3-213ENST00000558611 TMEM214Q6NUQ4 689 aaKnown RBP13.52□□□□□ -0.25
MARK3-213ENST00000558611 GGNBP2Q9H3C7 697 aa13.52□□□□□ -0.25
MARK3-213ENST00000558611 PIK3C2AO00443 1686 aa13.52□□□□□ -0.25
MARK3-213ENST00000558611 NRAPQ86VF7 1730 aa13.51□□□□□ -0.25
MARK3-213ENST00000558611 ACEP12821 1306 aa13.51□□□□□ -0.25
MARK3-213ENST00000558611 ADAMTS2O95450 1211 aa13.51□□□□□ -0.25
MARK3-213ENST00000558611 CTSHP09668 335 aa13.51□□□□□ -0.25
MARK3-213ENST00000558611 GNL2Q13823 731 aaKnown RBP13.51□□□□□ -0.25
MARK3-213ENST00000558611 CAPN10Q9HC96 672 aa13.51□□□□□ -0.25
MARK3-213ENST00000558611 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.51□□□□□ -0.25
MARK3-213ENST00000558611 WASF2Q9Y6W5 498 aa13.51□□□□□ -0.25
MARK3-213ENST00000558611 COL14A1Q05707 1796 aaKnown RBP13.5□□□□□ -0.25
MARK3-213ENST00000558611 AFF2P51816 1311 aa13.5□□□□□ -0.25
MARK3-213ENST00000558611 CPNE3O75131 537 aaKnown RBP13.5□□□□□ -0.25
MARK3-213ENST00000558611 ALDH1A1P00352 501 aa13.5□□□□□ -0.25
MARK3-213ENST00000558611 C8orf34Q49A92 452 aa13.5□□□□□ -0.25
MARK3-213ENST00000558611 ARMC5Q96C12 935 aa13.5□□□□□ -0.25
MARK3-213ENST00000558611 PRKAG2Q9UGJ0 569 aa13.5□□□□□ -0.25
MARK3-213ENST00000558611 BCS1LQ9Y276 419 aa13.5□□□□□ -0.25
MARK3-213ENST00000558611 USP47Q96K76 1375 aa13.49□□□□□ -0.25
MARK3-213ENST00000558611 ZNF772Q68DY9 489 aaPredicted RBP13.49□□□□□ -0.25
MARK3-213ENST00000558611 GMLQ99445 158 aa13.49□□□□□ -0.25
MARK3-213ENST00000558611 USP54Q70EL1 1684 aa13.49□□□□□ -0.25
MARK3-213ENST00000558611 MYOM1P52179 1685 aa13.48□□□□□ -0.25
MARK3-213ENST00000558611 TGFBR3LH3BV60 316 aa13.48□□□□□ -0.25
MARK3-213ENST00000558611 GIPC1O14908 333 aa13.48□□□□□ -0.25
MARK3-213ENST00000558611 SMARCA5O60264 1052 aaPredicted RBP13.48□□□□□ -0.25
MARK3-213ENST00000558611 MICAL2O94851 1124 aa13.48□□□□□ -0.25
MARK3-213ENST00000558611 EIF4BP23588 611 aaKnown RBP13.48□□□□□ -0.25
MARK3-213ENST00000558611 GPC1P35052 558 aa13.48□□□□□ -0.25
MARK3-213ENST00000558611 TXLNAP40222 546 aa13.48□□□□□ -0.25
MARK3-213ENST00000558611 SLC19A1P41440 591 aa13.48□□□□□ -0.25
MARK3-213ENST00000558611 ITPKCQ96DU7 683 aa13.48□□□□□ -0.25
MARK3-213ENST00000558611 KLF16Q9BXK1 252 aaPredicted RBP13.48□□□□□ -0.25
MARK3-213ENST00000558611 ACBD3Q9H3P7 528 aa13.48□□□□□ -0.25
MARK3-213ENST00000558611 USP6P35125 1406 aa13.47□□□□□ -0.25
MARK3-213ENST00000558611 GNASQ5JWF2 1037 aa13.47□□□□□ -0.25
MARK3-213ENST00000558611 AGBL1Q96MI9 1066 aa13.47□□□□□ -0.25
MARK3-213ENST00000558611 GPC6Q9Y625 555 aaPredicted RBP13.47□□□□□ -0.25
MARK3-213ENST00000558611 BRD4O60885 1362 aaPredicted RBP13.46□□□□□ -0.25
MARK3-213ENST00000558611 SLIT2O94813 1529 aa13.46□□□□□ -0.25
MARK3-213ENST00000558611 ST20-MTHFSA0A0A6YYL1 179 aa13.46□□□□□ -0.25
MARK3-213ENST00000558611 ATP2B1P20020 1258 aa13.46□□□□□ -0.25
MARK3-213ENST00000558611 IER5Q5VY09 327 aa13.46□□□□□ -0.25
MARK3-213ENST00000558611 XKR5Q6UX68 686 aa13.46□□□□□ -0.25
MARK3-213ENST00000558611 C7orf43Q8WVR3 580 aa13.46□□□□□ -0.25
MARK3-213ENST00000558611 CUEDC1Q9NWM3 386 aaPredicted RBP13.46□□□□□ -0.25
MARK3-213ENST00000558611 ZDHHC3Q9NYG2 299 aa13.46□□□□□ -0.25
MARK3-213ENST00000558611 ZIC2O95409 532 aaPredicted RBP13.45□□□□□ -0.26
MARK3-213ENST00000558611 PTPN12Q05209 780 aaKnown RBP13.45□□□□□ -0.26
MARK3-213ENST00000558611 DPH6Q7L8W6 267 aa13.45□□□□□ -0.26
MARK3-213ENST00000558611 RHPN1Q8TCX5 695 aa13.45□□□□□ -0.26
MARK3-213ENST00000558611 TESK2Q96S53 571 aa13.45□□□□□ -0.26
MARK3-213ENST00000558611 GRIP2Q9C0E4 1043 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms