RNA–Protein interactions for RNA: ENST00000558541.5

CPNE6-207, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-207ENST00000558541 XDHP47989 1333 aa17.21■□□□□ 0.34
CPNE6-207ENST00000558541 MYO3BQ8WXR4 1341 aa17.21■□□□□ 0.34
CPNE6-207ENST00000558541 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
CPNE6-207ENST00000558541 KIF22Q14807 665 aa17.2■□□□□ 0.34
CPNE6-207ENST00000558541 MAP3K11Q16584 847 aa17.2■□□□□ 0.34
CPNE6-207ENST00000558541 DACT2Q5SW24 774 aa17.2■□□□□ 0.34
CPNE6-207ENST00000558541 ERICH6BQ5W0A0 696 aa17.2■□□□□ 0.34
CPNE6-207ENST00000558541 ZSWIM8A7E2V4 1837 aa17.19■□□□□ 0.34
CPNE6-207ENST00000558541 A0A1W2PPC1 479 aa17.19■□□□□ 0.34
CPNE6-207ENST00000558541 ECM2O94769 699 aaPredicted RBP17.19■□□□□ 0.34
CPNE6-207ENST00000558541 GJA5P36382 358 aa17.19■□□□□ 0.34
CPNE6-207ENST00000558541 IREB2P48200 963 aaKnown RBP17.19■□□□□ 0.34
CPNE6-207ENST00000558541 ALDH1L2Q3SY69 923 aa17.19■□□□□ 0.34
CPNE6-207ENST00000558541 ANKRD13DQ6ZTN6 518 aa17.19■□□□□ 0.34
CPNE6-207ENST00000558541 KIAA0825Q8IV33 1275 aa17.19■□□□□ 0.34
CPNE6-207ENST00000558541 TSR2Q969E8 191 aaKnown RBP17.19■□□□□ 0.34
CPNE6-207ENST00000558541 ZNF646O15015 1829 aaPredicted RBP17.19■□□□□ 0.34
CPNE6-207ENST00000558541 ZBTB7BO15156 539 aaPredicted RBP17.18■□□□□ 0.34
CPNE6-207ENST00000558541 MTFR1Q15390 333 aa17.18■□□□□ 0.34
CPNE6-207ENST00000558541 SUPT20HL1Q3ZLR7 823 aa17.18■□□□□ 0.34
CPNE6-207ENST00000558541 DEFB123Q8N688 67 aa17.18■□□□□ 0.34
CPNE6-207ENST00000558541 NKX2-3Q8TAU0 364 aa17.18■□□□□ 0.34
CPNE6-207ENST00000558541 SHISA4Q96DD7 197 aa17.18■□□□□ 0.34
CPNE6-207ENST00000558541 CCDC85AQ96PX6 553 aaPredicted RBP17.18■□□□□ 0.34
CPNE6-207ENST00000558541 WDHD1O75717 1129 aaPredicted RBP17.17■□□□□ 0.34
CPNE6-207ENST00000558541 STRIP1Q5VSL9 837 aa17.17■□□□□ 0.34
CPNE6-207ENST00000558541 PLBD2Q8NHP8 589 aa17.17■□□□□ 0.34
CPNE6-207ENST00000558541 ISCA1Q9BUE6 129 aa17.17■□□□□ 0.34
CPNE6-207ENST00000558541 ARHGAP39Q9C0H5 1083 aa17.17■□□□□ 0.34
CPNE6-207ENST00000558541 STAP2Q9UGK3 403 aa17.17■□□□□ 0.34
CPNE6-207ENST00000558541 ECM29Q5VYK3 1845 aa17.17■□□□□ 0.34
CPNE6-207ENST00000558541 TESPA1A2RU30 521 aaPredicted RBP17.16■□□□□ 0.34
CPNE6-207ENST00000558541 UNCXA6NJT0 531 aa17.16■□□□□ 0.34
CPNE6-207ENST00000558541 MMP14P50281 582 aa17.16■□□□□ 0.34
CPNE6-207ENST00000558541 RARSP54136 660 aaKnown RBP17.16■□□□□ 0.34
CPNE6-207ENST00000558541 DLGAP5Q15398 846 aa17.16■□□□□ 0.34
CPNE6-207ENST00000558541 CCDC152Q4G0S7 254 aa17.16■□□□□ 0.34
CPNE6-207ENST00000558541 ANKRD18AQ8IVF6 992 aa17.16■□□□□ 0.34
CPNE6-207ENST00000558541 ANKRD13AQ8IZ07 590 aa17.16■□□□□ 0.34
CPNE6-207ENST00000558541 OPTNQ96CV9 577 aa17.16■□□□□ 0.34
CPNE6-207ENST00000558541 ELP3Q9H9T3 547 aa17.16■□□□□ 0.34
CPNE6-207ENST00000558541 COL1A1P02452 1464 aaPredicted RBP17.16■□□□□ 0.34
CPNE6-207ENST00000558541 SPEF2Q9C093 1822 aa17.16■□□□□ 0.34
CPNE6-207ENST00000558541 EVI5O60447 810 aa17.15■□□□□ 0.34
CPNE6-207ENST00000558541 VAMP4O75379 141 aa17.15■□□□□ 0.34
CPNE6-207ENST00000558541 HOXB7P09629 217 aa17.15■□□□□ 0.34
CPNE6-207ENST00000558541 HSP90B1P14625 803 aaKnown RBP17.15■□□□□ 0.34
CPNE6-207ENST00000558541 TTLL5Q6EMB2 1281 aa17.15■□□□□ 0.34
CPNE6-207ENST00000558541 STXBP5LQ9Y2K9 1186 aa17.15■□□□□ 0.34
CPNE6-207ENST00000558541 CCL15-CCL14A0A0B4J2E2 113 aa17.14■□□□□ 0.33
CPNE6-207ENST00000558541 USP2O75604 605 aaPredicted RBP17.14■□□□□ 0.33
CPNE6-207ENST00000558541 CCL15Q16663 113 aa17.14■□□□□ 0.33
CPNE6-207ENST00000558541 TWISTNBQ3B726 338 aaPredicted RBP17.14■□□□□ 0.33
CPNE6-207ENST00000558541 NBPF12Q5TAG4 269 aaPredicted RBP17.14■□□□□ 0.33
CPNE6-207ENST00000558541 Q7L0L9 218 aa17.14■□□□□ 0.33
CPNE6-207ENST00000558541 BIN2Q9UBW5 565 aaPredicted RBP17.14■□□□□ 0.33
CPNE6-207ENST00000558541 PPP2R3BQ9Y5P8 575 aa17.14■□□□□ 0.33
CPNE6-207ENST00000558541 SSC5DA1L4H1 1573 aa17.14■□□□□ 0.33
CPNE6-207ENST00000558541 MS4A1P11836 297 aa17.13■□□□□ 0.33
CPNE6-207ENST00000558541 RRP1P56182 461 aaKnown RBP17.13■□□□□ 0.33
CPNE6-207ENST00000558541 BRI3BPQ8WY22 251 aa17.13■□□□□ 0.33
CPNE6-207ENST00000558541 COA1Q9GZY4 146 aa17.13■□□□□ 0.33
CPNE6-207ENST00000558541 VEZTQ9HBM0 779 aa17.13■□□□□ 0.33
CPNE6-207ENST00000558541 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
CPNE6-207ENST00000558541 LAMA3Q16787 3333 aa17.13■□□□□ 0.33
CPNE6-207ENST00000558541 OTOFQ9HC10 1997 aa17.13■□□□□ 0.33
CPNE6-207ENST00000558541 MED23Q9ULK4 1368 aa17.13■□□□□ 0.33
CPNE6-207ENST00000558541 CLRN2A0PK11 232 aa17.12■□□□□ 0.33
CPNE6-207ENST00000558541 IPO8O15397 1037 aaKnown RBP17.12■□□□□ 0.33
CPNE6-207ENST00000558541 MYO1BO43795 1136 aa17.12■□□□□ 0.33
CPNE6-207ENST00000558541 GJA8P48165 433 aa17.12■□□□□ 0.33
CPNE6-207ENST00000558541 PRMT2P55345 433 aa17.12■□□□□ 0.33
CPNE6-207ENST00000558541 LACTBP83111 547 aaPredicted RBP17.12■□□□□ 0.33
CPNE6-207ENST00000558541 MS4A4AQ96JQ5 239 aa17.12■□□□□ 0.33
CPNE6-207ENST00000558541 RNF208Q9H0X6 261 aa17.12■□□□□ 0.33
CPNE6-207ENST00000558541 FARP2O94887 1054 aaPredicted RBP17.11■□□□□ 0.33
CPNE6-207ENST00000558541 GNRH1P01148 92 aa17.11■□□□□ 0.33
CPNE6-207ENST00000558541 CCL5P13501 91 aa17.11■□□□□ 0.33
CPNE6-207ENST00000558541 GTF2A2P52657 109 aa17.11■□□□□ 0.33
CPNE6-207ENST00000558541 GTF2IP78347 998 aa17.11■□□□□ 0.33
CPNE6-207ENST00000558541 FAM43AQ8N2R8 423 aa17.11■□□□□ 0.33
CPNE6-207ENST00000558541 ZBTB38Q8NAP3 1195 aaPredicted RBP17.11■□□□□ 0.33
CPNE6-207ENST00000558541 C8orf58Q8NAV2 365 aa17.11■□□□□ 0.33
CPNE6-207ENST00000558541 RAET1EQ8TD07 263 aa17.11■□□□□ 0.33
CPNE6-207ENST00000558541 ZBED3Q96IU2 234 aaPredicted RBP17.11■□□□□ 0.33
CPNE6-207ENST00000558541 GJB1P08034 283 aa17.1■□□□□ 0.33
CPNE6-207ENST00000558541 PDE3AQ14432 1141 aa17.1■□□□□ 0.33
CPNE6-207ENST00000558541 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.1■□□□□ 0.33
CPNE6-207ENST00000558541 JARID2Q92833 1246 aaPredicted RBP17.1■□□□□ 0.33
CPNE6-207ENST00000558541 UNC80Q8N2C7 3258 aa17.1■□□□□ 0.33
CPNE6-207ENST00000558541 PDE8AO60658 829 aa17.09■□□□□ 0.33
CPNE6-207ENST00000558541 GRK4P32298 578 aa17.09■□□□□ 0.33
CPNE6-207ENST00000558541 CCT4P50991 539 aaKnown RBP17.09■□□□□ 0.33
CPNE6-207ENST00000558541 GPR153Q6NV75 609 aa17.09■□□□□ 0.33
CPNE6-207ENST00000558541 UBE2Q1Q7Z7E8 422 aa17.09■□□□□ 0.33
CPNE6-207ENST00000558541 CNKSR2Q8WXI2 1034 aa17.09■□□□□ 0.33
CPNE6-207ENST00000558541 ARHGAP45Q92619 1136 aa17.09■□□□□ 0.33
CPNE6-207ENST00000558541 GTF3C3Q9Y5Q9 886 aa17.09■□□□□ 0.33
CPNE6-207ENST00000558541 KIF16BQ96L93 1317 aa17.09■□□□□ 0.33
CPNE6-207ENST00000558541 ZNF804BA4D1E1 1349 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms