RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 RBM27Q9P2N5 1060 aaKnown RBP8.8□□□□□ -1
LRRC28-207ENST00000558500 DBF4Q9UBU7 674 aaPredicted RBP8.8□□□□□ -1
LRRC28-207ENST00000558500 PTCH2Q9Y6C5 1203 aa8.8□□□□□ -1
LRRC28-207ENST00000558500 COL1A1P02452 1464 aaPredicted RBP8.79□□□□□ -1
LRRC28-207ENST00000558500 TESPA1A2RU30 521 aaPredicted RBP8.79□□□□□ -1
LRRC28-207ENST00000558500 PPP1R12BO60237 982 aaPredicted RBP8.79□□□□□ -1
LRRC28-207ENST00000558500 PDE8AO60658 829 aa8.79□□□□□ -1
LRRC28-207ENST00000558500 GJA5P36382 358 aa8.79□□□□□ -1
LRRC28-207ENST00000558500 ARHGEF6Q15052 776 aa8.79□□□□□ -1
LRRC28-207ENST00000558500 KIAA0825Q8IV33 1275 aa8.79□□□□□ -1
LRRC28-207ENST00000558500 ZNF579Q8NAF0 562 aaKnown RBP8.79□□□□□ -1
LRRC28-207ENST00000558500 CCDC85AQ96PX6 553 aaPredicted RBP8.79□□□□□ -1
LRRC28-207ENST00000558500 TSPYL2Q9H2G4 693 aaPredicted RBP8.79□□□□□ -1
LRRC28-207ENST00000558500 HYPKQ9NX55 129 aa8.79□□□□□ -1
LRRC28-207ENST00000558500 RBBP6Q7Z6E9 1792 aaKnown RBP8.78□□□□□ -1
LRRC28-207ENST00000558500 RANBP2P49792 3224 aaKnown RBP8.78□□□□□ -1
LRRC28-207ENST00000558500 SSC5DA1L4H1 1573 aa8.78□□□□□ -1
LRRC28-207ENST00000558500 CHL1O00533 1208 aa8.78□□□□□ -1
LRRC28-207ENST00000558500 PCCAP05165 728 aaPredicted RBP8.78□□□□□ -1
LRRC28-207ENST00000558500 HOXB7P09629 217 aa8.78□□□□□ -1
LRRC28-207ENST00000558500 LMOD3Q0VAK6 560 aa8.78□□□□□ -1
LRRC28-207ENST00000558500 SUPT20HL1Q3ZLR7 823 aa8.78□□□□□ -1
LRRC28-207ENST00000558500 FAM212AQ96EL1 285 aa8.78□□□□□ -1
LRRC28-207ENST00000558500 MINPP1Q9UNW1 487 aa8.78□□□□□ -1
LRRC28-207ENST00000558500 PPP2R3BQ9Y5P8 575 aa8.78□□□□□ -1
LRRC28-207ENST00000558500 USP2O75604 605 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-207ENST00000558500 MYCP01106 439 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-207ENST00000558500 IREB2P48200 963 aaKnown RBP8.77□□□□□ -1.01
LRRC28-207ENST00000558500 CCT4P50991 539 aaKnown RBP8.77□□□□□ -1.01
LRRC28-207ENST00000558500 DLGAP5Q15398 846 aa8.77□□□□□ -1.01
LRRC28-207ENST00000558500 TTLL5Q6EMB2 1281 aa8.77□□□□□ -1.01
LRRC28-207ENST00000558500 RIC3Q7Z5B4 369 aa8.77□□□□□ -1.01
LRRC28-207ENST00000558500 TXNRD3Q86VQ6 643 aa8.77□□□□□ -1.01
LRRC28-207ENST00000558500 CCDC191Q8NCU4 936 aa8.77□□□□□ -1.01
LRRC28-207ENST00000558500 JARID2Q92833 1246 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-207ENST00000558500 CDC5LQ99459 802 aaKnown RBP8.77□□□□□ -1.01
LRRC28-207ENST00000558500 MYD88Q99836 296 aa8.77□□□□□ -1.01
LRRC28-207ENST00000558500 PRO3102Q9H379 93 aa8.77□□□□□ -1.01
LRRC28-207ENST00000558500 BSDC1Q9NW68 430 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-207ENST00000558500 BRCA2P51587 3418 aa8.77□□□□□ -1.01
LRRC28-207ENST00000558500 ZNF804BA4D1E1 1349 aa8.77□□□□□ -1.01
LRRC28-207ENST00000558500 TMPOP42166 694 aaKnown RBP8.76□□□□□ -1.01
LRRC28-207ENST00000558500 CLCN6P51797 869 aa8.76□□□□□ -1.01
LRRC28-207ENST00000558500 GTF2IP78347 998 aa8.76□□□□□ -1.01
LRRC28-207ENST00000558500 GOLGA2Q08379 1002 aa8.76□□□□□ -1.01
LRRC28-207ENST00000558500 NBPF12Q5TAG4 269 aaPredicted RBP8.76□□□□□ -1.01
LRRC28-207ENST00000558500 ANKRD13AQ8IZ07 590 aa8.76□□□□□ -1.01
LRRC28-207ENST00000558500 MTMR14Q8NCE2 650 aa8.76□□□□□ -1.01
LRRC28-207ENST00000558500 SH3TC2Q8TF17 1288 aa8.76□□□□□ -1.01
LRRC28-207ENST00000558500 DPF3Q92784 378 aa8.76□□□□□ -1.01
LRRC28-207ENST00000558500 MS4A4AQ96JQ5 239 aa8.76□□□□□ -1.01
LRRC28-207ENST00000558500 ZFYVE28Q9HCC9 887 aa8.76□□□□□ -1.01
LRRC28-207ENST00000558500 TSHZ2Q9NRE2 1034 aa8.76□□□□□ -1.01
LRRC28-207ENST00000558500 CWC25Q9NXE8 425 aaPredicted RBP8.76□□□□□ -1.01
LRRC28-207ENST00000558500 LEMD3Q9Y2U8 911 aa8.76□□□□□ -1.01
LRRC28-207ENST00000558500 KLRK1P26718 216 aa8.75□□□□□ -1.01
LRRC28-207ENST00000558500 CTSWP56202 376 aa8.75□□□□□ -1.01
LRRC28-207ENST00000558500 TAF1CQ15572 869 aaPredicted RBP8.75□□□□□ -1.01
LRRC28-207ENST00000558500 CCER1Q8TC90 406 aaPredicted RBP8.75□□□□□ -1.01
LRRC28-207ENST00000558500 BRI3BPQ8WY22 251 aa8.75□□□□□ -1.01
LRRC28-207ENST00000558500 OPTNQ96CV9 577 aa8.75□□□□□ -1.01
LRRC28-207ENST00000558500 SHISA4Q96DD7 197 aa8.75□□□□□ -1.01
LRRC28-207ENST00000558500 ELP3Q9H9T3 547 aa8.75□□□□□ -1.01
LRRC28-207ENST00000558500 CIZ1Q9ULV3 898 aaPredicted RBP8.75□□□□□ -1.01
LRRC28-207ENST00000558500 LAS1LQ9Y4W2 734 aaKnown RBP8.75□□□□□ -1.01
LRRC28-207ENST00000558500 DLG5Q8TDM6 1919 aa8.75□□□□□ -1.01
LRRC28-207ENST00000558500 CENPFP49454 3210 aa8.75□□□□□ -1.01
LRRC28-207ENST00000558500 A0A0C4DFX4 3053 aa8.74□□□□□ -1.01
LRRC28-207ENST00000558500 CCL15-CCL14A0A0B4J2E2 113 aa8.74□□□□□ -1.01
LRRC28-207ENST00000558500 CLRN2A0PK11 232 aa8.74□□□□□ -1.01
LRRC28-207ENST00000558500 CCL15Q16663 113 aa8.74□□□□□ -1.01
LRRC28-207ENST00000558500 DUSP27Q5VZP5 1158 aa8.74□□□□□ -1.01
LRRC28-207ENST00000558500 UBE2Q1Q7Z7E8 422 aa8.74□□□□□ -1.01
LRRC28-207ENST00000558500 FAM43AQ8N2R8 423 aa8.74□□□□□ -1.01
LRRC28-207ENST00000558500 CERS5Q8N5B7 392 aa8.74□□□□□ -1.01
LRRC28-207ENST00000558500 TTLL11Q8NHH1 800 aa8.74□□□□□ -1.01
LRRC28-207ENST00000558500 ARHGAP39Q9C0H5 1083 aa8.74□□□□□ -1.01
LRRC28-207ENST00000558500 GREM2Q9H772 168 aa8.74□□□□□ -1.01
LRRC28-207ENST00000558500 PHAXQ9H814 394 aaKnown RBP8.74□□□□□ -1.01
LRRC28-207ENST00000558500 PCDHAC2Q9Y5I4 1007 aa8.74□□□□□ -1.01
LRRC28-207ENST00000558500 PSME4Q14997 1843 aa8.74□□□□□ -1.01
LRRC28-207ENST00000558500 A0A1W2PPC1 479 aa8.73□□□□□ -1.01
LRRC28-207ENST00000558500 MYO1BO43795 1136 aa8.73□□□□□ -1.01
LRRC28-207ENST00000558500 GNRH1P01148 92 aa8.73□□□□□ -1.01
LRRC28-207ENST00000558500 GTF2A2P52657 109 aa8.73□□□□□ -1.01
LRRC28-207ENST00000558500 PRMT2P55345 433 aa8.73□□□□□ -1.01
LRRC28-207ENST00000558500 RASA3Q14644 834 aa8.73□□□□□ -1.01
LRRC28-207ENST00000558500 KIF22Q14807 665 aa8.73□□□□□ -1.01
LRRC28-207ENST00000558500 MTFR1Q15390 333 aa8.73□□□□□ -1.01
LRRC28-207ENST00000558500 CFAP100Q494V2 611 aa8.73□□□□□ -1.01
LRRC28-207ENST00000558500 NKX2-3Q8TAU0 364 aa8.73□□□□□ -1.01
LRRC28-207ENST00000558500 PRMT6Q96LA8 375 aaPredicted RBP8.73□□□□□ -1.01
LRRC28-207ENST00000558500 HTATIP2Q9BUP3 242 aa8.73□□□□□ -1.01
LRRC28-207ENST00000558500 METTL22Q9BUU2 404 aaPredicted RBP8.73□□□□□ -1.01
LRRC28-207ENST00000558500 ANKRD2Q9GZV1 360 aa8.73□□□□□ -1.01
LRRC28-207ENST00000558500 VEZTQ9HBM0 779 aa8.73□□□□□ -1.01
LRRC28-207ENST00000558500 CD209Q9NNX6 404 aa8.73□□□□□ -1.01
LRRC28-207ENST00000558500 NR2E3Q9Y5X4 410 aa8.73□□□□□ -1.01
LRRC28-207ENST00000558500 AOX1Q06278 1338 aa8.73□□□□□ -1.01
LRRC28-207ENST00000558500 F8W031 263 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms