RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 ME1P48163 572 aa11.43□□□□□ -0.58
TRPM1-207ENST00000558445 TSR1Q2NL82 804 aaKnown RBP11.43□□□□□ -0.58
TRPM1-207ENST00000558445 BRAPQ7Z569 592 aa11.43□□□□□ -0.58
TRPM1-207ENST00000558445 KIAA0825Q8IV33 1275 aa11.43□□□□□ -0.58
TRPM1-207ENST00000558445 TMTC2Q8N394 836 aa11.43□□□□□ -0.58
TRPM1-207ENST00000558445 XPO4Q9C0E2 1151 aaKnown RBP11.43□□□□□ -0.58
TRPM1-207ENST00000558445 VIPAS39Q9H9C1 493 aa11.43□□□□□ -0.58
TRPM1-207ENST00000558445 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRPM1-207ENST00000558445 NOP53Q9NZM5 478 aaKnown RBP11.43□□□□□ -0.58
TRPM1-207ENST00000558445 IRAK1P51617 712 aa11.43□□□□□ -0.58
TRPM1-207ENST00000558445 CKAP4Q07065 602 aaKnown RBP11.43□□□□□ -0.58
TRPM1-207ENST00000558445 TPX2Q9ULW0 747 aaKnown RBP11.43□□□□□ -0.58
TRPM1-207ENST00000558445 SH3BGRP55822 239 aaPredicted RBP11.43□□□□□ -0.58
TRPM1-207ENST00000558445 SESN3P58005 492 aa11.43□□□□□ -0.58
TRPM1-207ENST00000558445 BEND6Q5SZJ8 279 aaPredicted RBP11.43□□□□□ -0.58
TRPM1-207ENST00000558445 MYSM1Q5VVJ2 828 aa11.43□□□□□ -0.58
TRPM1-207ENST00000558445 CEP128Q6ZU80 1094 aa11.43□□□□□ -0.58
TRPM1-207ENST00000558445 CCAR1Q8IX12 1150 aaKnown RBP11.43□□□□□ -0.58
TRPM1-207ENST00000558445 DHX58Q96C10 678 aa11.43□□□□□ -0.58
TRPM1-207ENST00000558445 TSGA10Q9BZW7 698 aa11.43□□□□□ -0.58
TRPM1-207ENST00000558445 SLC40A1Q9NP59 571 aa11.43□□□□□ -0.58
TRPM1-207ENST00000558445 GNAI1P63096 354 aa11.42□□□□□ -0.58
TRPM1-207ENST00000558445 PNMA8AQ86V59 439 aaPredicted RBP11.42□□□□□ -0.58
TRPM1-207ENST00000558445 EHBP1Q8NDI1 1231 aa11.42□□□□□ -0.58
TRPM1-207ENST00000558445 EIF3HO15372 352 aaKnown RBP eCLIP11.42□□□□□ -0.58
TRPM1-207ENST00000558445 PCK1P35558 622 aa11.42□□□□□ -0.58
TRPM1-207ENST00000558445 ZNF365Q70YC5 407 aa11.42□□□□□ -0.58
TRPM1-207ENST00000558445 PARP3Q9Y6F1 533 aa11.42□□□□□ -0.58
TRPM1-207ENST00000558445 ROR2Q01974 943 aaKnown RBP11.42□□□□□ -0.58
TRPM1-207ENST00000558445 TTC6Q86TZ1 520 aa11.42□□□□□ -0.58
TRPM1-207ENST00000558445 RTN3O95197 1032 aaPredicted RBP11.41□□□□□ -0.58
TRPM1-207ENST00000558445 MAP3K9P80192 1104 aa11.41□□□□□ -0.58
TRPM1-207ENST00000558445 ZNF569Q5MCW4 686 aa11.41□□□□□ -0.58
TRPM1-207ENST00000558445 KCNB2Q92953 911 aa11.41□□□□□ -0.58
TRPM1-207ENST00000558445 KAT14Q9H8E8 782 aa11.41□□□□□ -0.58
TRPM1-207ENST00000558445 FGD5Q6ZNL6 1462 aa11.41□□□□□ -0.58
TRPM1-207ENST00000558445 RASSF10A6NK89 507 aa11.41□□□□□ -0.58
TRPM1-207ENST00000558445 PSMA5P28066 241 aa11.41□□□□□ -0.58
TRPM1-207ENST00000558445 RAB27AP51159 221 aa11.41□□□□□ -0.58
TRPM1-207ENST00000558445 ODF2Q5BJF6 829 aa11.41□□□□□ -0.58
TRPM1-207ENST00000558445 RBM12BQ8IXT5 1001 aaKnown RBP11.41□□□□□ -0.58
TRPM1-207ENST00000558445 C17orf50Q8WW18 174 aa11.41□□□□□ -0.58
TRPM1-207ENST00000558445 VCX3BQ9H321 246 aa11.41□□□□□ -0.58
TRPM1-207ENST00000558445 VCX3AQ9NNX9 186 aa11.41□□□□□ -0.58
TRPM1-207ENST00000558445 COL17A1Q9UMD9 1497 aaPredicted RBP11.41□□□□□ -0.58
TRPM1-207ENST00000558445 ERICH2A1L162 156 aa11.41□□□□□ -0.58
TRPM1-207ENST00000558445 PYGLP06737 847 aa11.41□□□□□ -0.58
TRPM1-207ENST00000558445 PPP1R7Q15435 360 aa11.41□□□□□ -0.58
TRPM1-207ENST00000558445 PROCA1Q8NCQ7 364 aaPredicted RBP11.41□□□□□ -0.58
TRPM1-207ENST00000558445 DDX27Q96GQ7 796 aaKnown RBP11.41□□□□□ -0.58
TRPM1-207ENST00000558445 L1RE1Q9UN81 338 aa11.41□□□□□ -0.58
TRPM1-207ENST00000558445 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.41□□□□□ -0.58
TRPM1-207ENST00000558445 ANKRD1Q15327 319 aa11.4□□□□□ -0.58
TRPM1-207ENST00000558445 THEMIS2Q5TEJ8 643 aa11.4□□□□□ -0.58
TRPM1-207ENST00000558445 TMEM165Q9HC07 324 aa11.4□□□□□ -0.58
TRPM1-207ENST00000558445 IL16Q14005 1332 aa11.4□□□□□ -0.58
TRPM1-207ENST00000558445 IQCB1Q15051 598 aa11.4□□□□□ -0.58
TRPM1-207ENST00000558445 VCPKMTQ9H867 229 aa11.4□□□□□ -0.58
TRPM1-207ENST00000558445 PAIP2BQ9ULR5 123 aaKnown RBP11.4□□□□□ -0.58
TRPM1-207ENST00000558445 TRPC6Q9Y210 931 aa11.4□□□□□ -0.58
TRPM1-207ENST00000558445 GNAT1P11488 350 aa11.4□□□□□ -0.58
TRPM1-207ENST00000558445 PRPF4BQ13523 1007 aaKnown RBP11.4□□□□□ -0.58
TRPM1-207ENST00000558445 SLC5A9Q2M3M2 681 aa11.4□□□□□ -0.58
TRPM1-207ENST00000558445 APLFQ8IW19 511 aaPredicted RBP11.4□□□□□ -0.58
TRPM1-207ENST00000558445 FSIP1Q8NA03 581 aa11.4□□□□□ -0.58
TRPM1-207ENST00000558445 NAPGQ99747 312 aaPredicted RBP11.4□□□□□ -0.58
TRPM1-207ENST00000558445 LZTFL1Q9NQ48 299 aa11.4□□□□□ -0.58
TRPM1-207ENST00000558445 EME2A4GXA9 379 aaPredicted RBP11.4□□□□□ -0.59
TRPM1-207ENST00000558445 POLE2P56282 527 aa11.4□□□□□ -0.59
TRPM1-207ENST00000558445 AMOTQ4VCS5 1084 aa11.4□□□□□ -0.59
TRPM1-207ENST00000558445 RBM26Q5T8P6 1007 aaKnown RBP11.4□□□□□ -0.59
TRPM1-207ENST00000558445 WLSQ5T9L3 541 aa11.4□□□□□ -0.59
TRPM1-207ENST00000558445 PRPF40BQ6NWY9 871 aaKnown RBP11.4□□□□□ -0.59
TRPM1-207ENST00000558445 CYB5D1Q6P9G0 228 aa11.4□□□□□ -0.59
TRPM1-207ENST00000558445 ANKS4BQ8N8V4 417 aa11.4□□□□□ -0.59
TRPM1-207ENST00000558445 TSPAN18Q96SJ8 248 aa11.4□□□□□ -0.59
TRPM1-207ENST00000558445 DCTPP1Q9H773 170 aa11.4□□□□□ -0.59
TRPM1-207ENST00000558445 ASXL1Q8IXJ9 1541 aa11.4□□□□□ -0.59
TRPM1-207ENST00000558445 OATP04181 439 aa11.39□□□□□ -0.59
TRPM1-207ENST00000558445 LMOD1P29536 600 aaPredicted RBP11.39□□□□□ -0.59
TRPM1-207ENST00000558445 LACTBP83111 547 aaPredicted RBP11.39□□□□□ -0.59
TRPM1-207ENST00000558445 RSRC2Q7L4I2 434 aaKnown RBP11.39□□□□□ -0.59
TRPM1-207ENST00000558445 NSMCE1Q8WV22 266 aa11.39□□□□□ -0.59
TRPM1-207ENST00000558445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRPM1-207ENST00000558445 MTMR6Q9Y217 621 aa11.39□□□□□ -0.59
TRPM1-207ENST00000558445 EFCAB5A4FU69 1503 aa11.39□□□□□ -0.59
TRPM1-207ENST00000558445 CCDC80Q76M96 950 aa11.39□□□□□ -0.59
TRPM1-207ENST00000558445 LEO1Q8WVC0 666 aaPredicted RBP11.39□□□□□ -0.59
TRPM1-207ENST00000558445 MMADHCQ9H3L0 296 aaPredicted RBP11.39□□□□□ -0.59
TRPM1-207ENST00000558445 PLXNC1O60486 1568 aa11.39□□□□□ -0.59
TRPM1-207ENST00000558445 RPAP1Q9BWH6 1393 aaPredicted RBP11.39□□□□□ -0.59
TRPM1-207ENST00000558445 CUTAO60888 179 aa11.39□□□□□ -0.59
TRPM1-207ENST00000558445 PAX3P23760 479 aa11.39□□□□□ -0.59
TRPM1-207ENST00000558445 FBF1Q8TES7 1133 aa11.39□□□□□ -0.59
TRPM1-207ENST00000558445 TBC1D2BQ9UPU7 963 aa11.39□□□□□ -0.59
TRPM1-207ENST00000558445 E7EVH7 732 aa11.38□□□□□ -0.59
TRPM1-207ENST00000558445 AK2P54819 239 aa11.38□□□□□ -0.59
TRPM1-207ENST00000558445 FANCCQ00597 558 aa11.38□□□□□ -0.59
TRPM1-207ENST00000558445 SPECC1LQ69YQ0 1117 aa11.38□□□□□ -0.59
TRPM1-207ENST00000558445 LARP6Q9BRS8 491 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms