RNA–Protein interactions for RNA: ENST00000558438.1

TTC23-213, Transcript of tetratricopeptide repeat domain 23, humanhuman

TSL 2

Gene TTC23, Length 424 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC23-213ENST00000558438 SCAF8Q9UPN6 1271 aaKnown RBP16.42■□□□□ 0.22
TTC23-213ENST00000558438 COL4A1P02462 1669 aa16.42■□□□□ 0.22
TTC23-213ENST00000558438 PRMT2P55345 433 aa16.41■□□□□ 0.22
TTC23-213ENST00000558438 GCKRQ14397 625 aa16.41■□□□□ 0.22
TTC23-213ENST00000558438 C8orf58Q8NAV2 365 aa16.41■□□□□ 0.22
TTC23-213ENST00000558438 MXD3Q9BW11 206 aa16.41■□□□□ 0.22
TTC23-213ENST00000558438 ZFYVE28Q9HCC9 887 aa16.41■□□□□ 0.22
TTC23-213ENST00000558438 IGF2BP3O00425 579 aaKnown RBP eCLIP16.4■□□□□ 0.22
TTC23-213ENST00000558438 APAF1O14727 1248 aa16.4■□□□□ 0.22
TTC23-213ENST00000558438 TNNI2P48788 182 aa16.4■□□□□ 0.22
TTC23-213ENST00000558438 GTF2A2P52657 109 aa16.4■□□□□ 0.22
TTC23-213ENST00000558438 CHRNDQ07001 517 aa16.4■□□□□ 0.22
TTC23-213ENST00000558438 CRHR2Q13324 411 aa16.4■□□□□ 0.22
TTC23-213ENST00000558438 IFIT5Q13325 482 aaKnown RBP16.4■□□□□ 0.22
TTC23-213ENST00000558438 KIF22Q14807 665 aa16.4■□□□□ 0.22
TTC23-213ENST00000558438 CFAP100Q494V2 611 aa16.4■□□□□ 0.22
TTC23-213ENST00000558438 TXNRD3Q86VQ6 643 aa16.4■□□□□ 0.22
TTC23-213ENST00000558438 LINS1Q8NG48 757 aa16.4■□□□□ 0.22
TTC23-213ENST00000558438 JARID2Q92833 1246 aaPredicted RBP16.4■□□□□ 0.22
TTC23-213ENST00000558438 R3HDMLQ9H3Y0 253 aa16.4■□□□□ 0.22
TTC23-213ENST00000558438 CAPN2P17655 700 aa16.39■□□□□ 0.21
TTC23-213ENST00000558438 SLC9C1Q4G0N8 1177 aa16.39■□□□□ 0.21
TTC23-213ENST00000558438 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
TTC23-213ENST00000558438 HELBQ8NG08 1087 aaPredicted RBP16.39■□□□□ 0.21
TTC23-213ENST00000558438 SERPINA10Q9UK55 444 aa16.39■□□□□ 0.21
TTC23-213ENST00000558438 POTEFA5A3E0 1075 aa16.38■□□□□ 0.21
TTC23-213ENST00000558438 RBM5P52756 815 aaKnown RBP eCLIP16.38■□□□□ 0.21
TTC23-213ENST00000558438 CCDC27Q2M243 656 aa16.38■□□□□ 0.21
TTC23-213ENST00000558438 CSADQ9Y600 493 aa16.38■□□□□ 0.21
TTC23-213ENST00000558438 KIAA0100Q14667 2235 aaKnown RBP16.37■□□□□ 0.21
TTC23-213ENST00000558438 USP2O75604 605 aaPredicted RBP16.37■□□□□ 0.21
TTC23-213ENST00000558438 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
TTC23-213ENST00000558438 RASA3Q14644 834 aa16.37■□□□□ 0.21
TTC23-213ENST00000558438 CWF19L2Q2TBE0 894 aaKnown RBP16.37■□□□□ 0.21
TTC23-213ENST00000558438 CD99L2Q8TCZ2 262 aa16.37■□□□□ 0.21
TTC23-213ENST00000558438 ZNF333Q96JL9 665 aa16.37■□□□□ 0.21
TTC23-213ENST00000558438 VEZTQ9HBM0 779 aa16.37■□□□□ 0.21
TTC23-213ENST00000558438 WTIPA6NIX2 430 aaPredicted RBP16.36■□□□□ 0.21
TTC23-213ENST00000558438 SLC4A8Q2Y0W8 1093 aa16.36■□□□□ 0.21
TTC23-213ENST00000558438 TWISTNBQ3B726 338 aaPredicted RBP16.36■□□□□ 0.21
TTC23-213ENST00000558438 NKX2-3Q8TAU0 364 aa16.36■□□□□ 0.21
TTC23-213ENST00000558438 DNAAF4Q8WXU2 420 aa16.36■□□□□ 0.21
TTC23-213ENST00000558438 OPTNQ96CV9 577 aa16.36■□□□□ 0.21
TTC23-213ENST00000558438 CLMNQ96JQ2 1002 aa16.36■□□□□ 0.21
TTC23-213ENST00000558438 PRMT6Q96LA8 375 aaPredicted RBP16.36■□□□□ 0.21
TTC23-213ENST00000558438 IL16Q14005 1332 aa16.36■□□□□ 0.21
TTC23-213ENST00000558438 MYH3P11055 1940 aa16.35■□□□□ 0.21
TTC23-213ENST00000558438 MAP3K9P80192 1104 aa16.35■□□□□ 0.21
TTC23-213ENST00000558438 CCDC57Q2TAC2 916 aa16.35■□□□□ 0.21
TTC23-213ENST00000558438 SPDYE2Q495Y8 402 aa16.35■□□□□ 0.21
TTC23-213ENST00000558438 NBPF12Q5TAG4 269 aaPredicted RBP16.35■□□□□ 0.21
TTC23-213ENST00000558438 FAM205AQ6ZU69 1335 aa16.35■□□□□ 0.21
TTC23-213ENST00000558438 RBBP6Q7Z6E9 1792 aaKnown RBP16.34■□□□□ 0.21
TTC23-213ENST00000558438 CETPP11597 493 aa16.34■□□□□ 0.21
TTC23-213ENST00000558438 EN2P19622 333 aaPredicted RBP16.34■□□□□ 0.21
TTC23-213ENST00000558438 HOXD10P28358 340 aa16.34■□□□□ 0.21
TTC23-213ENST00000558438 FXR1P51114 621 aaKnown RBP eCLIP16.34■□□□□ 0.21
TTC23-213ENST00000558438 HDLBPQ00341 1268 aaKnown RBP16.34■□□□□ 0.21
TTC23-213ENST00000558438 FLIIQ13045 1269 aa16.34■□□□□ 0.21
TTC23-213ENST00000558438 FKBP5Q13451 457 aaPredicted RBP16.34■□□□□ 0.21
TTC23-213ENST00000558438 TAF1CQ15572 869 aaPredicted RBP16.34■□□□□ 0.21
TTC23-213ENST00000558438 TAF7LQ5H9L4 462 aa16.34■□□□□ 0.21
TTC23-213ENST00000558438 CERS5Q8N5B7 392 aa16.34■□□□□ 0.21
TTC23-213ENST00000558438 MS4A4AQ96JQ5 239 aa16.34■□□□□ 0.21
TTC23-213ENST00000558438 CLRN2A0PK11 232 aa16.33■□□□□ 0.2
TTC23-213ENST00000558438 CASP7P55210 303 aa16.33■□□□□ 0.2
TTC23-213ENST00000558438 DDX10Q13206 875 aaKnown RBP16.33■□□□□ 0.2
TTC23-213ENST00000558438 UBE4AQ14139 1066 aa16.33■□□□□ 0.2
TTC23-213ENST00000558438 LDHAL6AQ6ZMR3 332 aa16.33■□□□□ 0.2
TTC23-213ENST00000558438 TBC1D22AQ8WUA7 517 aa16.33■□□□□ 0.2
TTC23-213ENST00000558438 PTPN18Q99952 460 aa16.33■□□□□ 0.2
TTC23-213ENST00000558438 MRIQ9BWK5 157 aa16.33■□□□□ 0.2
TTC23-213ENST00000558438 LAMB1P07942 1786 aa16.33■□□□□ 0.2
TTC23-213ENST00000558438 CCL15-CCL14A0A0B4J2E2 113 aa16.32■□□□□ 0.2
TTC23-213ENST00000558438 F8W031 263 aaPredicted RBP16.32■□□□□ 0.2
TTC23-213ENST00000558438 TLR2O60603 784 aa16.32■□□□□ 0.2
TTC23-213ENST00000558438 KLRK1P26718 216 aa16.32■□□□□ 0.2
TTC23-213ENST00000558438 CCL15Q16663 113 aa16.32■□□□□ 0.2
TTC23-213ENST00000558438 MFSD14BQ5SR56 506 aa16.32■□□□□ 0.2
TTC23-213ENST00000558438 TSPYL6Q8N831 410 aa16.32■□□□□ 0.2
TTC23-213ENST00000558438 PRKRIP1Q9H875 184 aaPredicted RBP16.32■□□□□ 0.2
TTC23-213ENST00000558438 CNNM1Q9NRU3 951 aa16.32■□□□□ 0.2
TTC23-213ENST00000558438 TMOD2Q9NZR1 351 aa16.32■□□□□ 0.2
TTC23-213ENST00000558438 ZNF70Q9UC06 446 aaPredicted RBP16.32■□□□□ 0.2
TTC23-213ENST00000558438 IRS2Q9Y4H2 1338 aa16.32■□□□□ 0.2
TTC23-213ENST00000558438 SSC5DA1L4H1 1573 aa16.31■□□□□ 0.2
TTC23-213ENST00000558438 SNAPC2Q13487 334 aa16.31■□□□□ 0.2
TTC23-213ENST00000558438 FKBP1CQ5VVH2 108 aa16.31■□□□□ 0.2
TTC23-213ENST00000558438 ERO1BQ86YB8 467 aa16.31■□□□□ 0.2
TTC23-213ENST00000558438 ELP3Q9H9T3 547 aa16.31■□□□□ 0.2
TTC23-213ENST00000558438 TTF2Q9UNY4 1162 aaKnown RBP16.31■□□□□ 0.2
TTC23-213ENST00000558438 SUGT1Q9Y2Z0 365 aa16.31■□□□□ 0.2
TTC23-213ENST00000558438 HIBADHP31937 336 aaKnown RBP16.3■□□□□ 0.2
TTC23-213ENST00000558438 DZIP1LQ8IYY4 767 aaKnown RBP16.3■□□□□ 0.2
TTC23-213ENST00000558438 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.3■□□□□ 0.2
TTC23-213ENST00000558438 TDRD7Q8NHU6 1098 aaKnown RBP16.3■□□□□ 0.2
TTC23-213ENST00000558438 CHMP3Q9Y3E7 222 aa16.3■□□□□ 0.2
TTC23-213ENST00000558438 MAST3O60307 1309 aa16.29■□□□□ 0.2
TTC23-213ENST00000558438 SPDYE5A6NIY4 337 aa16.29■□□□□ 0.2
TTC23-213ENST00000558438 TAF5LO75529 589 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms