RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 NYAP1Q6ZVC0 841 aa15.07■□□□□ 0
HMGB1P8-201ENST00000558211 NLGN2Q8NFZ4 835 aa15.07■□□□□ 0
HMGB1P8-201ENST00000558211 ZNF622Q969S3 477 aaKnown RBP eCLIP15.07■□□□□ 0
HMGB1P8-201ENST00000558211 SUCLG2Q96I99 432 aa15.07■□□□□ 0
HMGB1P8-201ENST00000558211 GPBP1L1Q9HC44 474 aaPredicted RBP15.07■□□□□ 0
HMGB1P8-201ENST00000558211 LRP5O75197 1615 aa15.06■□□□□ 0
HMGB1P8-201ENST00000558211 TNRC6CQ9HCJ0 1690 aaKnown RBP15.06■□□□□ 0
HMGB1P8-201ENST00000558211 GNAI3P08754 354 aa15.06■□□□□ 0
HMGB1P8-201ENST00000558211 HSP90B1P14625 803 aaKnown RBP15.06■□□□□ 0
HMGB1P8-201ENST00000558211 DPEP1P16444 411 aa15.06■□□□□ 0
HMGB1P8-201ENST00000558211 SYT17Q9BSW7 474 aa15.06■□□□□ 0
HMGB1P8-201ENST00000558211 CHMP3Q9Y3E7 222 aa15.06■□□□□ 0
HMGB1P8-201ENST00000558211 LAMB2P55268 1798 aa15.06■□□□□ 0
HMGB1P8-201ENST00000558211 KIF13BQ9NQT8 1826 aa15.06■□□□□ 0
HMGB1P8-201ENST00000558211 ZBTB7BO15156 539 aaPredicted RBP15.05■□□□□ -0
HMGB1P8-201ENST00000558211 TGFB2P61812 414 aa15.05■□□□□ -0
HMGB1P8-201ENST00000558211 EPHA10Q5JZY3 1008 aa15.05■□□□□ -0
HMGB1P8-201ENST00000558211 RDH13Q8NBN7 331 aa15.05■□□□□ -0
HMGB1P8-201ENST00000558211 RPGRQ92834 1020 aaKnown RBP15.05■□□□□ -0
HMGB1P8-201ENST00000558211 CRBNQ96SW2 442 aa15.05■□□□□ -0
HMGB1P8-201ENST00000558211 KDM4CQ9H3R0 1056 aa15.05■□□□□ -0
HMGB1P8-201ENST00000558211 DDX19BQ9UMR2 479 aa15.05■□□□□ -0
HMGB1P8-201ENST00000558211 UTYO14607 1347 aa15.05■□□□□ -0
HMGB1P8-201ENST00000558211 MYH3P11055 1940 aa15.05■□□□□ -0
HMGB1P8-201ENST00000558211 CFHP08603 1231 aa15.04■□□□□ -0
HMGB1P8-201ENST00000558211 APLP1P51693 650 aa15.04■□□□□ -0
HMGB1P8-201ENST00000558211 CTSWP56202 376 aa15.04■□□□□ -0
HMGB1P8-201ENST00000558211 BICC1Q9H694 974 aaKnown RBP15.04■□□□□ -0
HMGB1P8-201ENST00000558211 C1orf115Q9H7X2 142 aa15.04■□□□□ -0
HMGB1P8-201ENST00000558211 LRRFIP2Q9Y608 721 aaKnown RBP15.04■□□□□ -0
HMGB1P8-201ENST00000558211 GNAI2P04899 355 aa15.03■□□□□ -0
HMGB1P8-201ENST00000558211 SRGNP10124 158 aa15.03■□□□□ -0
HMGB1P8-201ENST00000558211 GCGRP47871 477 aa15.03■□□□□ -0
HMGB1P8-201ENST00000558211 FOXO4P98177 505 aa15.03■□□□□ -0
HMGB1P8-201ENST00000558211 CCDC152Q4G0S7 254 aa15.03■□□□□ -0
HMGB1P8-201ENST00000558211 LMBR1LQ6UX01 489 aa15.03■□□□□ -0
HMGB1P8-201ENST00000558211 TTLL11Q8NHH1 800 aa15.03■□□□□ -0
HMGB1P8-201ENST00000558211 MASTLQ96GX5 879 aa15.03■□□□□ -0
HMGB1P8-201ENST00000558211 KAZALD1Q96I82 304 aa15.03■□□□□ -0
HMGB1P8-201ENST00000558211 PLA2G12BQ9BX93 195 aa15.03■□□□□ -0
HMGB1P8-201ENST00000558211 HDAC5Q9UQL6 1122 aa15.03■□□□□ -0
HMGB1P8-201ENST00000558211 TAF1P21675 1872 aa15.03■□□□□ -0
HMGB1P8-201ENST00000558211 CACNA1SQ13698 1873 aa15.03■□□□□ -0
HMGB1P8-201ENST00000558211 COL11A2P13942 1736 aaPredicted RBP15.03■□□□□ -0
HMGB1P8-201ENST00000558211 KLRG2A4D1S0 409 aaPredicted RBP15.02■□□□□ -0
HMGB1P8-201ENST00000558211 NPR1P16066 1061 aa15.02■□□□□ -0
HMGB1P8-201ENST00000558211 SF3B3Q15393 1217 aaKnown RBP15.02■□□□□ -0
HMGB1P8-201ENST00000558211 DDX46Q7L014 1031 aaKnown RBP15.02■□□□□ -0
HMGB1P8-201ENST00000558211 RBM17Q96I25 401 aaKnown RBP15.02■□□□□ -0
HMGB1P8-201ENST00000558211 SEC31BQ9NQW1 1179 aa15.02■□□□□ -0
HMGB1P8-201ENST00000558211 PDZRN3Q9UPQ7 1066 aa15.02■□□□□ -0
HMGB1P8-201ENST00000558211 RIC1Q4ADV7 1423 aa15.01□□□□□ -0.01
HMGB1P8-201ENST00000558211 KCNA3P22001 575 aa15.01□□□□□ -0.01
HMGB1P8-201ENST00000558211 CRY2Q49AN0 593 aa15.01□□□□□ -0.01
HMGB1P8-201ENST00000558211 GREM2Q9H772 168 aa15.01□□□□□ -0.01
HMGB1P8-201ENST00000558211 PLSCR2Q9NRY7 297 aa15.01□□□□□ -0.01
HMGB1P8-201ENST00000558211 PIM2Q9P1W9 311 aa15.01□□□□□ -0.01
HMGB1P8-201ENST00000558211 KIAA1551Q9HCM1 1747 aa15□□□□□ -0.01
HMGB1P8-201ENST00000558211 CSF1RP07333 972 aa15□□□□□ -0.01
HMGB1P8-201ENST00000558211 STYK1Q6J9G0 422 aa15□□□□□ -0.01
HMGB1P8-201ENST00000558211 ERICH6Q7L0X2 663 aa15□□□□□ -0.01
HMGB1P8-201ENST00000558211 ANKRD44Q8N8A2 993 aa15□□□□□ -0.01
HMGB1P8-201ENST00000558211 CHMP4BQ9H444 224 aaKnown RBP15□□□□□ -0.01
HMGB1P8-201ENST00000558211 ACTN4O43707 911 aaKnown RBP14.99□□□□□ -0.01
HMGB1P8-201ENST00000558211 ITGA6P23229 1130 aa14.99□□□□□ -0.01
HMGB1P8-201ENST00000558211 ALDH1B1P30837 517 aa14.99□□□□□ -0.01
HMGB1P8-201ENST00000558211 IFIT5Q13325 482 aaKnown RBP14.99□□□□□ -0.01
HMGB1P8-201ENST00000558211 CCDC57Q2TAC2 916 aa14.99□□□□□ -0.01
HMGB1P8-201ENST00000558211 TTLL6Q8N841 843 aa14.99□□□□□ -0.01
HMGB1P8-201ENST00000558211 EXOC6Q8TAG9 804 aa14.99□□□□□ -0.01
HMGB1P8-201ENST00000558211 CNKSR1Q969H4 720 aa14.99□□□□□ -0.01
HMGB1P8-201ENST00000558211 BCS1LQ9Y276 419 aa14.99□□□□□ -0.01
HMGB1P8-201ENST00000558211 ANKRD18BA2A2Z9 1011 aa14.98□□□□□ -0.01
HMGB1P8-201ENST00000558211 HOXA10P31260 410 aaPredicted RBP14.98□□□□□ -0.01
HMGB1P8-201ENST00000558211 KMT5BQ4FZB7 885 aa14.98□□□□□ -0.01
HMGB1P8-201ENST00000558211 TAF7LQ5H9L4 462 aa14.98□□□□□ -0.01
HMGB1P8-201ENST00000558211 CELF1Q92879 486 aaKnown RBP14.98□□□□□ -0.01
HMGB1P8-201ENST00000558211 ZNF594Q96JF6 807 aaPredicted RBP14.98□□□□□ -0.01
HMGB1P8-201ENST00000558211 CRAMP1Q96RY5 1269 aa14.98□□□□□ -0.01
HMGB1P8-201ENST00000558211 PRR14Q9BWN1 585 aa14.98□□□□□ -0.01
HMGB1P8-201ENST00000558211 ZBTB40Q9NUA8 1239 aa14.98□□□□□ -0.01
HMGB1P8-201ENST00000558211 DLEC1Q9Y238 1755 aa14.98□□□□□ -0.01
HMGB1P8-201ENST00000558211 SLX4Q8IY92 1834 aa14.97□□□□□ -0.01
HMGB1P8-201ENST00000558211 GRAPQ13588 217 aa14.97□□□□□ -0.01
HMGB1P8-201ENST00000558211 RABL6Q3YEC7 729 aaPredicted RBP14.97□□□□□ -0.01
HMGB1P8-201ENST00000558211 DALRD3Q5D0E6 543 aaKnown RBP14.97□□□□□ -0.01
HMGB1P8-201ENST00000558211 PRPF40BQ6NWY9 871 aaKnown RBP14.97□□□□□ -0.01
HMGB1P8-201ENST00000558211 ANKRD18AQ8IVF6 992 aa14.97□□□□□ -0.01
HMGB1P8-201ENST00000558211 GRAPLQ8TC17 118 aaPredicted RBP14.97□□□□□ -0.01
HMGB1P8-201ENST00000558211 BEGAINQ9BUH8 593 aa14.97□□□□□ -0.01
HMGB1P8-201ENST00000558211 SPEF2Q9C093 1822 aa14.96□□□□□ -0.01
HMGB1P8-201ENST00000558211 SRGAP3O43295 1099 aa14.96□□□□□ -0.01
HMGB1P8-201ENST00000558211 IGHMBP2P38935 993 aaKnown RBP14.96□□□□□ -0.01
HMGB1P8-201ENST00000558211 RPS8P62241 208 aaKnown RBP14.96□□□□□ -0.01
HMGB1P8-201ENST00000558211 KLHDC4Q8TBB5 520 aa14.96□□□□□ -0.01
HMGB1P8-201ENST00000558211 CDC5LQ99459 802 aaKnown RBP14.96□□□□□ -0.01
HMGB1P8-201ENST00000558211 BRCA1P38398 1863 aaKnown RBP14.95□□□□□ -0.02
HMGB1P8-201ENST00000558211 PNMA6EA0A0J9YXQ4 647 aa14.95□□□□□ -0.02
HMGB1P8-201ENST00000558211 PPEF1O14829 653 aaPredicted RBP14.95□□□□□ -0.02
HMGB1P8-201ENST00000558211 C21orf2O43822 256 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms