RNA–Protein interactions for RNA: ENST00000557559.1

PRKCH-225, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-225ENST00000557559 MTMR14Q8NCE2 650 aa9.45□□□□□ -0.9
PRKCH-225ENST00000557559 ZBED3Q96IU2 234 aaPredicted RBP9.45□□□□□ -0.9
PRKCH-225ENST00000557559 CCDC85AQ96PX6 553 aaPredicted RBP9.45□□□□□ -0.9
PRKCH-225ENST00000557559 ANKRD2Q9GZV1 360 aa9.45□□□□□ -0.9
PRKCH-225ENST00000557559 MINPP1Q9UNW1 487 aa9.45□□□□□ -0.9
PRKCH-225ENST00000557559 COLQQ9Y215 455 aaPredicted RBP9.45□□□□□ -0.9
PRKCH-225ENST00000557559 ZNF804BA4D1E1 1349 aa9.45□□□□□ -0.9
PRKCH-225ENST00000557559 IGHMBP2P38935 993 aaKnown RBP9.44□□□□□ -0.9
PRKCH-225ENST00000557559 CALD1Q05682 793 aaKnown RBP9.44□□□□□ -0.9
PRKCH-225ENST00000557559 METTL22Q9BUU2 404 aaPredicted RBP9.44□□□□□ -0.9
PRKCH-225ENST00000557559 MXD3Q9BW11 206 aa9.44□□□□□ -0.9
PRKCH-225ENST00000557559 TESPA1A2RU30 521 aaPredicted RBP9.43□□□□□ -0.9
PRKCH-225ENST00000557559 KCNJ4P48050 445 aa9.43□□□□□ -0.9
PRKCH-225ENST00000557559 NEXNQ0ZGT2 675 aa9.43□□□□□ -0.9
PRKCH-225ENST00000557559 TNFAIP1Q13829 316 aa9.43□□□□□ -0.9
PRKCH-225ENST00000557559 RALBP1Q15311 655 aa9.43□□□□□ -0.9
PRKCH-225ENST00000557559 SLC4A8Q2Y0W8 1093 aa9.43□□□□□ -0.9
PRKCH-225ENST00000557559 TTLL11Q8NHH1 800 aa9.43□□□□□ -0.9
PRKCH-225ENST00000557559 RUNDC1Q96C34 613 aa9.43□□□□□ -0.9
PRKCH-225ENST00000557559 CLMNQ96JQ2 1002 aa9.43□□□□□ -0.9
PRKCH-225ENST00000557559 CUL9Q8IWT3 2517 aa9.43□□□□□ -0.9
PRKCH-225ENST00000557559 OTOFQ9HC10 1997 aa9.43□□□□□ -0.9
PRKCH-225ENST00000557559 RANBP2P49792 3224 aaKnown RBP9.42□□□□□ -0.9
PRKCH-225ENST00000557559 GNRH1P01148 92 aa9.42□□□□□ -0.9
PRKCH-225ENST00000557559 GTF2IP78347 998 aa9.42□□□□□ -0.9
PRKCH-225ENST00000557559 KIF22Q14807 665 aa9.42□□□□□ -0.9
PRKCH-225ENST00000557559 WDR43Q15061 677 aaKnown RBP eCLIP9.42□□□□□ -0.9
PRKCH-225ENST00000557559 MPHOSPH8Q99549 860 aa9.42□□□□□ -0.9
PRKCH-225ENST00000557559 GREM2Q9H772 168 aa9.42□□□□□ -0.9
PRKCH-225ENST00000557559 PHAXQ9H814 394 aaKnown RBP9.42□□□□□ -0.9
PRKCH-225ENST00000557559 ZFYVE28Q9HCC9 887 aa9.42□□□□□ -0.9
PRKCH-225ENST00000557559 MBIPQ9NS73 344 aa9.42□□□□□ -0.9
PRKCH-225ENST00000557559 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
PRKCH-225ENST00000557559 TRIM35Q9UPQ4 493 aa9.42□□□□□ -0.9
PRKCH-225ENST00000557559 SZT2Q5T011 3432 aa9.41□□□□□ -0.9
PRKCH-225ENST00000557559 GTF2A2P52657 109 aa9.41□□□□□ -0.9
PRKCH-225ENST00000557559 PRMT2P55345 433 aa9.41□□□□□ -0.9
PRKCH-225ENST00000557559 FKBP1AP62942 108 aaKnown RBP9.41□□□□□ -0.9
PRKCH-225ENST00000557559 GNAI1P63096 354 aa9.41□□□□□ -0.9
PRKCH-225ENST00000557559 TAF1CQ15572 869 aaPredicted RBP9.41□□□□□ -0.9
PRKCH-225ENST00000557559 CCDC30Q5VVM6 783 aa9.41□□□□□ -0.9
PRKCH-225ENST00000557559 ZNF804AQ7Z570 1209 aa9.41□□□□□ -0.9
PRKCH-225ENST00000557559 CCDC146Q8IYE0 955 aa9.41□□□□□ -0.9
PRKCH-225ENST00000557559 VEZTQ9HBM0 779 aa9.41□□□□□ -0.9
PRKCH-225ENST00000557559 IFT57Q9NWB7 429 aa9.41□□□□□ -0.9
PRKCH-225ENST00000557559 FZD1Q9UP38 647 aa9.41□□□□□ -0.9
PRKCH-225ENST00000557559 MAP3K2Q9Y2U5 619 aa9.41□□□□□ -0.9
PRKCH-225ENST00000557559 PTCH2Q9Y6C5 1203 aa9.41□□□□□ -0.9
PRKCH-225ENST00000557559 H0YGN5 161 aa9.4□□□□□ -0.9
PRKCH-225ENST00000557559 CFAP100Q494V2 611 aa9.4□□□□□ -0.9
PRKCH-225ENST00000557559 TXNRD3Q86VQ6 643 aa9.4□□□□□ -0.9
PRKCH-225ENST00000557559 NKX2-3Q8TAU0 364 aa9.4□□□□□ -0.9
PRKCH-225ENST00000557559 OPTNQ96CV9 577 aa9.4□□□□□ -0.9
PRKCH-225ENST00000557559 OTUD5Q96G74 571 aa9.4□□□□□ -0.9
PRKCH-225ENST00000557559 CD209Q9NNX6 404 aa9.4□□□□□ -0.9
PRKCH-225ENST00000557559 ZCCHC17Q9NP64 241 aaKnown RBP9.4□□□□□ -0.9
PRKCH-225ENST00000557559 CSADQ9Y600 493 aa9.4□□□□□ -0.9
PRKCH-225ENST00000557559 ARAP2Q8WZ64 1704 aa9.39□□□□□ -0.91
PRKCH-225ENST00000557559 MYBBP1AQ9BQG0 1328 aaKnown RBP9.39□□□□□ -0.91
PRKCH-225ENST00000557559 CCL15-CCL14A0A0B4J2E2 113 aa9.39□□□□□ -0.91
PRKCH-225ENST00000557559 CLRN2A0PK11 232 aa9.39□□□□□ -0.91
PRKCH-225ENST00000557559 WTIPA6NIX2 430 aaPredicted RBP9.39□□□□□ -0.91
PRKCH-225ENST00000557559 USP2O75604 605 aaPredicted RBP9.39□□□□□ -0.91
PRKCH-225ENST00000557559 ITGA6P23229 1130 aa9.39□□□□□ -0.91
PRKCH-225ENST00000557559 GJA5P36382 358 aa9.39□□□□□ -0.91
PRKCH-225ENST00000557559 RBM5P52756 815 aaKnown RBP eCLIP9.39□□□□□ -0.91
PRKCH-225ENST00000557559 RASA3Q14644 834 aa9.39□□□□□ -0.91
PRKCH-225ENST00000557559 CCL15Q16663 113 aa9.39□□□□□ -0.91
PRKCH-225ENST00000557559 NBPF12Q5TAG4 269 aaPredicted RBP9.39□□□□□ -0.91
PRKCH-225ENST00000557559 KSR2Q6VAB6 950 aa9.39□□□□□ -0.91
PRKCH-225ENST00000557559 CHRDL2Q6WN34 429 aa9.39□□□□□ -0.91
PRKCH-225ENST00000557559 C15orf52Q6ZUT6 534 aaKnown RBP9.39□□□□□ -0.91
PRKCH-225ENST00000557559 JARID2Q92833 1246 aaPredicted RBP9.39□□□□□ -0.91
PRKCH-225ENST00000557559 PTPN18Q99952 460 aa9.39□□□□□ -0.91
PRKCH-225ENST00000557559 HTATIP2Q9BUP3 242 aa9.39□□□□□ -0.91
PRKCH-225ENST00000557559 ELP3Q9H9T3 547 aa9.39□□□□□ -0.91
PRKCH-225ENST00000557559 A0A1B0GUL6 1792 aa9.38□□□□□ -0.91
PRKCH-225ENST00000557559 IGKV5-2P06315 115 aa9.38□□□□□ -0.91
PRKCH-225ENST00000557559 ZNF853P0CG23 659 aa9.38□□□□□ -0.91
PRKCH-225ENST00000557559 IL1R1P14778 569 aa9.38□□□□□ -0.91
PRKCH-225ENST00000557559 KLRK1P26718 216 aa9.38□□□□□ -0.91
PRKCH-225ENST00000557559 TNNI2P48788 182 aa9.38□□□□□ -0.91
PRKCH-225ENST00000557559 CHRNDQ07001 517 aa9.38□□□□□ -0.91
PRKCH-225ENST00000557559 UBE3BQ7Z3V4 1068 aa9.38□□□□□ -0.91
PRKCH-225ENST00000557559 CERS5Q8N5B7 392 aa9.38□□□□□ -0.91
PRKCH-225ENST00000557559 MS4A4AQ96JQ5 239 aa9.38□□□□□ -0.91
PRKCH-225ENST00000557559 PLA2G12BQ9BX93 195 aa9.38□□□□□ -0.91
PRKCH-225ENST00000557559 STK31Q9BXU1 1019 aa9.38□□□□□ -0.91
PRKCH-225ENST00000557559 MYH16Q9H6N6 1097 aa9.38□□□□□ -0.91
PRKCH-225ENST00000557559 A0A1W2PPC1 479 aa9.37□□□□□ -0.91
PRKCH-225ENST00000557559 PI4KAP2A4QPH2 592 aa9.37□□□□□ -0.91
PRKCH-225ENST00000557559 NEURL1BA8MQ27 555 aa9.37□□□□□ -0.91
PRKCH-225ENST00000557559 F8W031 263 aaPredicted RBP9.37□□□□□ -0.91
PRKCH-225ENST00000557559 DLL1O00548 723 aa9.37□□□□□ -0.91
PRKCH-225ENST00000557559 TLR2O60603 784 aa9.37□□□□□ -0.91
PRKCH-225ENST00000557559 CETPP11597 493 aa9.37□□□□□ -0.91
PRKCH-225ENST00000557559 LACTBP83111 547 aaPredicted RBP9.37□□□□□ -0.91
PRKCH-225ENST00000557559 PI4KAP1Q8N8J0 262 aa9.37□□□□□ -0.91
PRKCH-225ENST00000557559 SLC17A8Q8NDX2 589 aa9.37□□□□□ -0.91
PRKCH-225ENST00000557559 HELBQ8NG08 1087 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms