RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 CLIP2Q9UDT6 1046 aa20.75■□□□□ 0.91
XRCC3-218ENST00000557439 PCDHA7Q9UN72 937 aa20.75■□□□□ 0.91
XRCC3-218ENST00000557439 MCAMP43121 646 aa20.74■□□□□ 0.91
XRCC3-218ENST00000557439 IFIT5Q13325 482 aaKnown RBP20.74■□□□□ 0.91
XRCC3-218ENST00000557439 CCDC73Q6ZRK6 1079 aa20.74■□□□□ 0.91
XRCC3-218ENST00000557439 CACTINQ8WUQ7 758 aaKnown RBP20.74■□□□□ 0.91
XRCC3-218ENST00000557439 PIGBQ92521 554 aa20.74■□□□□ 0.91
XRCC3-218ENST00000557439 GPAA1O43292 621 aa20.74■□□□□ 0.91
XRCC3-218ENST00000557439 IMMTQ16891 758 aaKnown RBP20.74■□□□□ 0.91
XRCC3-218ENST00000557439 METTL24Q5JXM2 366 aa20.74■□□□□ 0.91
XRCC3-218ENST00000557439 ZSCAN25Q6NSZ9 544 aa20.74■□□□□ 0.91
XRCC3-218ENST00000557439 C16orf45Q96MC5 204 aaPredicted RBP20.74■□□□□ 0.91
XRCC3-218ENST00000557439 AIFM3Q96NN9 605 aa20.74■□□□□ 0.91
XRCC3-218ENST00000557439 HPS5Q9UPZ3 1129 aa20.74■□□□□ 0.91
XRCC3-218ENST00000557439 RIOK3O14730 519 aaKnown RBP20.73■□□□□ 0.91
XRCC3-218ENST00000557439 ENGASEQ8NFI3 743 aa20.73■□□□□ 0.91
XRCC3-218ENST00000557439 PRIMPOLQ96LW4 560 aa20.73■□□□□ 0.91
XRCC3-218ENST00000557439 KINO60870 393 aaKnown RBP20.73■□□□□ 0.91
XRCC3-218ENST00000557439 ATG3Q9NT62 314 aa20.73■□□□□ 0.91
XRCC3-218ENST00000557439 ATP2B3Q16720 1220 aa20.72■□□□□ 0.91
XRCC3-218ENST00000557439 LDHAL6AQ6ZMR3 332 aa20.72■□□□□ 0.91
XRCC3-218ENST00000557439 MB21D2Q8IYB1 491 aaPredicted RBP20.72■□□□□ 0.91
XRCC3-218ENST00000557439 CARD10Q9BWT7 1032 aa20.72■□□□□ 0.91
XRCC3-218ENST00000557439 INCENPQ9NQS7 918 aa20.72■□□□□ 0.91
XRCC3-218ENST00000557439 KIF28PB7ZC32 967 aa20.72■□□□□ 0.91
XRCC3-218ENST00000557439 SNAP23O00161 211 aa20.72■□□□□ 0.91
XRCC3-218ENST00000557439 ITGA6P23229 1130 aa20.72■□□□□ 0.91
XRCC3-218ENST00000557439 KIF6Q6ZMV9 814 aa20.72■□□□□ 0.91
XRCC3-218ENST00000557439 HELBQ8NG08 1087 aaPredicted RBP20.72■□□□□ 0.91
XRCC3-218ENST00000557439 ZNF396Q96N95 335 aaPredicted RBP20.72■□□□□ 0.91
XRCC3-218ENST00000557439 NBPF3Q9H094 633 aa20.72■□□□□ 0.91
XRCC3-218ENST00000557439 SENP2Q9HC62 589 aa20.72■□□□□ 0.91
XRCC3-218ENST00000557439 ORC3Q9UBD5 711 aaPredicted RBP20.72■□□□□ 0.91
XRCC3-218ENST00000557439 SHANK3Q9BYB0 1731 aa20.71■□□□□ 0.91
XRCC3-218ENST00000557439 GOLGA6L19H0YKK7 550 aa20.71■□□□□ 0.91
XRCC3-218ENST00000557439 KLHL34Q8N239 644 aa20.71■□□□□ 0.91
XRCC3-218ENST00000557439 APPBP2Q92624 585 aa20.71■□□□□ 0.91
XRCC3-218ENST00000557439 AKAP2Q9Y2D5 859 aa20.71■□□□□ 0.91
XRCC3-218ENST00000557439 RIC1Q4ADV7 1423 aa20.71■□□□□ 0.91
XRCC3-218ENST00000557439 TNS2Q63HR2 1409 aa20.71■□□□□ 0.91
XRCC3-218ENST00000557439 TOGARAM1Q9Y4F4 1720 aa20.71■□□□□ 0.91
XRCC3-218ENST00000557439 PCCAP05165 728 aaPredicted RBP20.71■□□□□ 0.91
XRCC3-218ENST00000557439 NDUFA8P51970 172 aa20.71■□□□□ 0.91
XRCC3-218ENST00000557439 FAM160A1Q05DH4 1040 aa20.71■□□□□ 0.91
XRCC3-218ENST00000557439 C8orf76Q96K31 380 aa20.71■□□□□ 0.91
XRCC3-218ENST00000557439 KIF3AQ9Y496 699 aa20.71■□□□□ 0.91
XRCC3-218ENST00000557439 MYO5AQ9Y4I1 1855 aaKnown RBP20.7■□□□□ 0.9
XRCC3-218ENST00000557439 TPM3P06753 285 aa20.7■□□□□ 0.9
XRCC3-218ENST00000557439 STX1AQ16623 288 aa20.7■□□□□ 0.9
XRCC3-218ENST00000557439 ZBTB38Q8NAP3 1195 aaPredicted RBP20.7■□□□□ 0.9
XRCC3-218ENST00000557439 IDH1O75874 414 aaKnown RBP20.7■□□□□ 0.9
XRCC3-218ENST00000557439 DHX40Q8IX18 779 aaKnown RBP20.7■□□□□ 0.9
XRCC3-218ENST00000557439 BCL2L12Q9HB09 334 aa20.7■□□□□ 0.9
XRCC3-218ENST00000557439 PAPPAQ13219 1627 aa20.7■□□□□ 0.9
XRCC3-218ENST00000557439 ZNF213O14771 459 aa20.69■□□□□ 0.9
XRCC3-218ENST00000557439 CSF1RP07333 972 aa20.69■□□□□ 0.9
XRCC3-218ENST00000557439 SLC9C2Q5TAH2 1124 aa20.69■□□□□ 0.9
XRCC3-218ENST00000557439 RALYLQ86SE5 291 aaKnown RBP20.69■□□□□ 0.9
XRCC3-218ENST00000557439 AOPEPQ8N6M6 819 aa20.69■□□□□ 0.9
XRCC3-218ENST00000557439 TTLL11Q8NHH1 800 aa20.69■□□□□ 0.9
XRCC3-218ENST00000557439 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.69■□□□□ 0.9
XRCC3-218ENST00000557439 PIH1D3Q9NQM4 214 aaKnown RBP20.69■□□□□ 0.9
XRCC3-218ENST00000557439 CNNM1Q9NRU3 951 aa20.69■□□□□ 0.9
XRCC3-218ENST00000557439 CTNNA3Q9UI47 895 aa20.69■□□□□ 0.9
XRCC3-218ENST00000557439 RIPOR2Q9Y4F9 1068 aa20.69■□□□□ 0.9
XRCC3-218ENST00000557439 BIN1O00499 593 aa20.69■□□□□ 0.9
XRCC3-218ENST00000557439 APPP05067 770 aa20.69■□□□□ 0.9
XRCC3-218ENST00000557439 STK38Q15208 465 aa20.69■□□□□ 0.9
XRCC3-218ENST00000557439 FILIP1Q7Z7B0 1213 aa20.69■□□□□ 0.9
XRCC3-218ENST00000557439 TBC1D10CQ8IV04 446 aa20.69■□□□□ 0.9
XRCC3-218ENST00000557439 SLC4A9Q96Q91 983 aa20.69■□□□□ 0.9
XRCC3-218ENST00000557439 XIRP1Q702N8 1843 aaKnown RBP20.68■□□□□ 0.9
XRCC3-218ENST00000557439 BECN2A8MW95 431 aa20.68■□□□□ 0.9
XRCC3-218ENST00000557439 UBE2Q2LH0YL09 131 aa20.68■□□□□ 0.9
XRCC3-218ENST00000557439 SDF4Q9BRK5 362 aa20.68■□□□□ 0.9
XRCC3-218ENST00000557439 CPLX1O14810 134 aa20.68■□□□□ 0.9
XRCC3-218ENST00000557439 SF3A1Q15459 793 aaKnown RBP20.68■□□□□ 0.9
XRCC3-218ENST00000557439 ISM2Q6H9L7 571 aa20.68■□□□□ 0.9
XRCC3-218ENST00000557439 CYB5R4Q7L1T6 521 aa20.68■□□□□ 0.9
XRCC3-218ENST00000557439 NLRP10Q86W26 655 aa20.68■□□□□ 0.9
XRCC3-218ENST00000557439 FMR1NBQ8N0W7 255 aaPredicted RBP20.68■□□□□ 0.9
XRCC3-218ENST00000557439 LINC00301Q8NCQ3 95 aa20.68■□□□□ 0.9
XRCC3-218ENST00000557439 NCOA7Q8NI08 942 aa20.68■□□□□ 0.9
XRCC3-218ENST00000557439 SYTL4Q96C24 671 aaPredicted RBP20.68■□□□□ 0.9
XRCC3-218ENST00000557439 SLAIN2Q9P270 581 aa20.68■□□□□ 0.9
XRCC3-218ENST00000557439 PHKA1P46020 1223 aa20.67■□□□□ 0.9
XRCC3-218ENST00000557439 MRPS27Q92552 414 aaKnown RBP20.67■□□□□ 0.9
XRCC3-218ENST00000557439 TBC1D2BQ9UPU7 963 aa20.67■□□□□ 0.9
XRCC3-218ENST00000557439 PLEKHG2Q9H7P9 1386 aa20.67■□□□□ 0.9
XRCC3-218ENST00000557439 USP27XA6NNY8 438 aa20.67■□□□□ 0.9
XRCC3-218ENST00000557439 EVCP57679 992 aa20.67■□□□□ 0.9
XRCC3-218ENST00000557439 FBXO18Q8NFZ0 1043 aa20.67■□□□□ 0.9
XRCC3-218ENST00000557439 MYL10Q9BUA6 226 aa20.67■□□□□ 0.9
XRCC3-218ENST00000557439 ZFYP08048 801 aaPredicted RBP20.66■□□□□ 0.9
XRCC3-218ENST00000557439 MARCKSP29966 332 aaPredicted RBP20.66■□□□□ 0.9
XRCC3-218ENST00000557439 GTF2F1P35269 517 aaKnown RBP eCLIP20.66■□□□□ 0.92e-6■■■■□ 26.2
XRCC3-218ENST00000557439 GIGYF2Q6Y7W6 1299 aaKnown RBP20.66■□□□□ 0.9
XRCC3-218ENST00000557439 PHKBQ93100 1093 aa20.66■□□□□ 0.9
XRCC3-218ENST00000557439 RTEL1Q9NZ71 1219 aa20.66■□□□□ 0.9
XRCC3-218ENST00000557439 WWC3Q9ULE0 1092 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms