RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 TSPYL6Q8N831 410 aa16.19■□□□□ 0.18
PSEN1-221ENST00000557293 IFT57Q9NWB7 429 aa16.19■□□□□ 0.18
PSEN1-221ENST00000557293 PPP2R3BQ9Y5P8 575 aa16.19■□□□□ 0.18
PSEN1-221ENST00000557293 SPEF2Q9C093 1822 aa16.19■□□□□ 0.18
PSEN1-221ENST00000557293 CLRN2A0PK11 232 aa16.18■□□□□ 0.18
PSEN1-221ENST00000557293 NEURL1BA8MQ27 555 aa16.18■□□□□ 0.18
PSEN1-221ENST00000557293 DDX58O95786 925 aaKnown RBP16.18■□□□□ 0.18
PSEN1-221ENST00000557293 CSF1RP07333 972 aa16.18■□□□□ 0.18
PSEN1-221ENST00000557293 CASP7P55210 303 aa16.18■□□□□ 0.18
PSEN1-221ENST00000557293 SUPT20HL1Q3ZLR7 823 aa16.18■□□□□ 0.18
PSEN1-221ENST00000557293 C15orf52Q6ZUT6 534 aaKnown RBP16.18■□□□□ 0.18
PSEN1-221ENST00000557293 PLA2G12BQ9BX93 195 aa16.18■□□□□ 0.18
PSEN1-221ENST00000557293 ANKRD2Q9GZV1 360 aa16.18■□□□□ 0.18
PSEN1-221ENST00000557293 SPDYE2BA6NHP3 402 aa16.17■□□□□ 0.18
PSEN1-221ENST00000557293 SPDYE6P0CI01 402 aa16.17■□□□□ 0.18
PSEN1-221ENST00000557293 ITGA6P23229 1130 aa16.17■□□□□ 0.18
PSEN1-221ENST00000557293 GNAI1P63096 354 aa16.17■□□□□ 0.18
PSEN1-221ENST00000557293 CHRNDQ07001 517 aa16.17■□□□□ 0.18
PSEN1-221ENST00000557293 CFAP100Q494V2 611 aa16.17■□□□□ 0.18
PSEN1-221ENST00000557293 TMEM106CQ9BVX2 250 aa16.17■□□□□ 0.18
PSEN1-221ENST00000557293 PTCH2Q9Y6C5 1203 aa16.17■□□□□ 0.18
PSEN1-221ENST00000557293 H0YGN5 161 aa16.16■□□□□ 0.18
PSEN1-221ENST00000557293 IGHMBP2P38935 993 aaKnown RBP16.16■□□□□ 0.18
PSEN1-221ENST00000557293 RASA3Q14644 834 aa16.16■□□□□ 0.18
PSEN1-221ENST00000557293 CCDC30Q5VVM6 783 aa16.16■□□□□ 0.18
PSEN1-221ENST00000557293 OTUD7BQ6GQQ9 843 aa16.16■□□□□ 0.18
PSEN1-221ENST00000557293 G2E3Q7L622 706 aa16.16■□□□□ 0.18
PSEN1-221ENST00000557293 UBE3BQ7Z3V4 1068 aa16.16■□□□□ 0.18
PSEN1-221ENST00000557293 ANKRD13AQ8IZ07 590 aa16.16■□□□□ 0.18
PSEN1-221ENST00000557293 CNKSR2Q8WXI2 1034 aa16.16■□□□□ 0.18
PSEN1-221ENST00000557293 BRI3BPQ8WY22 251 aa16.16■□□□□ 0.18
PSEN1-221ENST00000557293 MYH3P11055 1940 aa16.15■□□□□ 0.18
PSEN1-221ENST00000557293 F8W031 263 aaPredicted RBP16.15■□□□□ 0.18
PSEN1-221ENST00000557293 IL1R1P14778 569 aa16.15■□□□□ 0.18
PSEN1-221ENST00000557293 IREB2P48200 963 aaKnown RBP16.15■□□□□ 0.18
PSEN1-221ENST00000557293 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.15■□□□□ 0.18
PSEN1-221ENST00000557293 HELBQ8NG08 1087 aaPredicted RBP16.15■□□□□ 0.18
PSEN1-221ENST00000557293 ELP3Q9H9T3 547 aa16.15■□□□□ 0.18
PSEN1-221ENST00000557293 MYBBP1AQ9BQG0 1328 aaKnown RBP16.15■□□□□ 0.18
PSEN1-221ENST00000557293 APAF1O14727 1248 aa16.14■□□□□ 0.17
PSEN1-221ENST00000557293 TAF5LO75529 589 aa16.14■□□□□ 0.17
PSEN1-221ENST00000557293 FKBP1AP62942 108 aaKnown RBP16.14■□□□□ 0.17
PSEN1-221ENST00000557293 CDAN1Q8IWY9 1227 aa16.14■□□□□ 0.17
PSEN1-221ENST00000557293 OPTNQ96CV9 577 aa16.14■□□□□ 0.17
PSEN1-221ENST00000557293 TEPSINQ96N21 525 aa16.14■□□□□ 0.17
PSEN1-221ENST00000557293 CENPFP49454 3210 aa16.14■□□□□ 0.17
PSEN1-221ENST00000557293 GCKRQ14397 625 aa16.13■□□□□ 0.17
PSEN1-221ENST00000557293 WDR43Q15061 677 aaKnown RBP eCLIP16.13■□□□□ 0.17
PSEN1-221ENST00000557293 FAM43AQ8N2R8 423 aa16.13■□□□□ 0.17
PSEN1-221ENST00000557293 MPHOSPH8Q99549 860 aa16.13■□□□□ 0.17
PSEN1-221ENST00000557293 VEZTQ9HBM0 779 aa16.13■□□□□ 0.17
PSEN1-221ENST00000557293 ECM29Q5VYK3 1845 aa16.12■□□□□ 0.17
PSEN1-221ENST00000557293 TRIOBPQ9H2D6 2365 aa16.12■□□□□ 0.17
PSEN1-221ENST00000557293 SLC9C1Q4G0N8 1177 aa16.12■□□□□ 0.17
PSEN1-221ENST00000557293 NBPF11Q86T75 865 aa16.12■□□□□ 0.17
PSEN1-221ENST00000557293 ZNF70Q9UC06 446 aaPredicted RBP16.12■□□□□ 0.17
PSEN1-221ENST00000557293 MYO1BO43795 1136 aa16.11■□□□□ 0.17
PSEN1-221ENST00000557293 NEXNQ0ZGT2 675 aa16.11■□□□□ 0.17
PSEN1-221ENST00000557293 TAF1CQ15572 869 aaPredicted RBP16.11■□□□□ 0.17
PSEN1-221ENST00000557293 SLC4A8Q2Y0W8 1093 aa16.11■□□□□ 0.17
PSEN1-221ENST00000557293 ARHGAP39Q9C0H5 1083 aa16.11■□□□□ 0.17
PSEN1-221ENST00000557293 JAG2Q9Y219 1238 aa16.11■□□□□ 0.17
PSEN1-221ENST00000557293 CCL15-CCL14A0A0B4J2E2 113 aa16.1■□□□□ 0.17
PSEN1-221ENST00000557293 MYCP01106 439 aaPredicted RBP16.1■□□□□ 0.17
PSEN1-221ENST00000557293 KCNJ4P48050 445 aa16.1■□□□□ 0.17
PSEN1-221ENST00000557293 FOXO4P98177 505 aa16.1■□□□□ 0.17
PSEN1-221ENST00000557293 CCL15Q16663 113 aa16.1■□□□□ 0.17
PSEN1-221ENST00000557293 SPDYE2Q495Y8 402 aa16.1■□□□□ 0.17
PSEN1-221ENST00000557293 SH3TC2Q8TF17 1288 aa16.1■□□□□ 0.17
PSEN1-221ENST00000557293 TDRD3Q9H7E2 651 aaKnown RBP16.1■□□□□ 0.17
PSEN1-221ENST00000557293 ZFYVE28Q9HCC9 887 aa16.1■□□□□ 0.17
PSEN1-221ENST00000557293 BRCA2P51587 3418 aa16.1■□□□□ 0.17
PSEN1-221ENST00000557293 OTOFQ9HC10 1997 aa16.09■□□□□ 0.17
PSEN1-221ENST00000557293 CEP290O15078 2479 aa16.09■□□□□ 0.17
PSEN1-221ENST00000557293 MAP3K9P80192 1104 aa16.09■□□□□ 0.17
PSEN1-221ENST00000557293 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.09■□□□□ 0.17
PSEN1-221ENST00000557293 SHISA4Q96DD7 197 aa16.09■□□□□ 0.17
PSEN1-221ENST00000557293 CHMP4AQ9BY43 222 aa16.09■□□□□ 0.17
PSEN1-221ENST00000557293 PRO3102Q9H379 93 aa16.09■□□□□ 0.17
PSEN1-221ENST00000557293 RBM27Q9P2N5 1060 aaKnown RBP16.09■□□□□ 0.17
PSEN1-221ENST00000557293 FAM205AQ6ZU69 1335 aa16.09■□□□□ 0.17
PSEN1-221ENST00000557293 ZSWIM8A7E2V4 1837 aa16.08■□□□□ 0.17
PSEN1-221ENST00000557293 GTF2A2P52657 109 aa16.08■□□□□ 0.16
PSEN1-221ENST00000557293 RBM5P52756 815 aaKnown RBP eCLIP16.08■□□□□ 0.16
PSEN1-221ENST00000557293 CALD1Q05682 793 aaKnown RBP16.08■□□□□ 0.16
PSEN1-221ENST00000557293 VGLL4Q14135 290 aa16.08■□□□□ 0.16
PSEN1-221ENST00000557293 ARHGEF6Q15052 776 aa16.08■□□□□ 0.16
PSEN1-221ENST00000557293 CHRDL2Q6WN34 429 aa16.08■□□□□ 0.16
PSEN1-221ENST00000557293 ZNF804AQ7Z570 1209 aa16.08■□□□□ 0.16
PSEN1-221ENST00000557293 ANKRD18BA2A2Z9 1011 aa16.07■□□□□ 0.16
PSEN1-221ENST00000557293 TLR2O60603 784 aa16.07■□□□□ 0.16
PSEN1-221ENST00000557293 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
PSEN1-221ENST00000557293 CTGFP29279 349 aa16.07■□□□□ 0.16
PSEN1-221ENST00000557293 MTFR1Q15390 333 aa16.07■□□□□ 0.16
PSEN1-221ENST00000557293 UBE2Q1Q7Z7E8 422 aa16.07■□□□□ 0.16
PSEN1-221ENST00000557293 TDRD7Q8NHU6 1098 aaKnown RBP16.07■□□□□ 0.16
PSEN1-221ENST00000557293 TMEM39BQ9GZU3 492 aa16.07■□□□□ 0.16
PSEN1-221ENST00000557293 BTBD19C9JJ37 291 aa16.06■□□□□ 0.16
PSEN1-221ENST00000557293 LACTBP83111 547 aaPredicted RBP16.06■□□□□ 0.16
PSEN1-221ENST00000557293 GRIK5Q16478 980 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms