RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SPINK2P20155 84 aa6.6□□□□□ -1.35
SRP54-212ENST00000556992 PREPP48147 710 aa6.6□□□□□ -1.35
SRP54-212ENST00000556992 NLRP12P59046 1061 aa6.6□□□□□ -1.35
SRP54-212ENST00000556992 HGSNATQ68CP4 663 aa6.6□□□□□ -1.35
SRP54-212ENST00000556992 SLC51AQ86UW1 340 aa6.6□□□□□ -1.35
SRP54-212ENST00000556992 ATCAYQ86WG3 371 aa6.6□□□□□ -1.35
SRP54-212ENST00000556992 NCAPG2Q86XI2 1143 aa6.6□□□□□ -1.35
SRP54-212ENST00000556992 SHKBP1Q8TBC3 707 aa6.6□□□□□ -1.35
SRP54-212ENST00000556992 POP1Q99575 1024 aaKnown RBP6.6□□□□□ -1.35
SRP54-212ENST00000556992 PBX4Q9BYU1 374 aa6.6□□□□□ -1.35
SRP54-212ENST00000556992 KCNF1Q9H3M0 494 aa6.6□□□□□ -1.35
SRP54-212ENST00000556992 TARBP1Q13395 1621 aaKnown RBP6.59□□□□□ -1.35
SRP54-212ENST00000556992 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.59□□□□□ -1.35
SRP54-212ENST00000556992 SWI5Q1ZZU3 235 aa6.59□□□□□ -1.35
SRP54-212ENST00000556992 RNF43Q68DV7 783 aa6.59□□□□□ -1.35
SRP54-212ENST00000556992 DCAF11Q8TEB1 546 aa6.59□□□□□ -1.35
SRP54-212ENST00000556992 MYRFLQ96LU7 910 aa6.59□□□□□ -1.35
SRP54-212ENST00000556992 HHIPQ96QV1 700 aa6.59□□□□□ -1.35
SRP54-212ENST00000556992 ABI2Q9NYB9 513 aaPredicted RBP6.59□□□□□ -1.35
SRP54-212ENST00000556992 CXXC1Q9P0U4 656 aaPredicted RBP6.59□□□□□ -1.35
SRP54-212ENST00000556992 CNTN3Q9P232 1028 aa6.59□□□□□ -1.35
SRP54-212ENST00000556992 MAP3K1Q13233 1512 aa6.59□□□□□ -1.35
SRP54-212ENST00000556992 ZNF608Q9ULD9 1512 aaPredicted RBP6.59□□□□□ -1.35
SRP54-212ENST00000556992 CASKIN1Q8WXD9 1431 aa6.59□□□□□ -1.36
SRP54-212ENST00000556992 A6NHS1 94 aa6.58□□□□□ -1.36
SRP54-212ENST00000556992 KIF4AO95239 1232 aa6.58□□□□□ -1.36
SRP54-212ENST00000556992 BMP3P12645 472 aa6.58□□□□□ -1.36
SRP54-212ENST00000556992 HOXA10P31260 410 aaPredicted RBP6.58□□□□□ -1.36
SRP54-212ENST00000556992 FAM20CQ8IXL6 584 aa6.58□□□□□ -1.36
SRP54-212ENST00000556992 CACTIN-AS1Q8N1I8 211 aa6.58□□□□□ -1.36
SRP54-212ENST00000556992 CEP120Q8N960 986 aa6.58□□□□□ -1.36
SRP54-212ENST00000556992 SLC7A3Q8WY07 619 aa6.58□□□□□ -1.36
SRP54-212ENST00000556992 DBNDD2Q9BQY9 259 aa6.58□□□□□ -1.36
SRP54-212ENST00000556992 ZMYND15Q9H091 742 aa6.58□□□□□ -1.36
SRP54-212ENST00000556992 SEC31BQ9NQW1 1179 aa6.58□□□□□ -1.36
SRP54-212ENST00000556992 CUL7Q14999 1698 aa6.58□□□□□ -1.36
SRP54-212ENST00000556992 EFCAB5A4FU69 1503 aa6.57□□□□□ -1.36
SRP54-212ENST00000556992 TMEM164Q5U3C3 297 aa6.57□□□□□ -1.36
SRP54-212ENST00000556992 FAM117BQ6P1L5 589 aa6.57□□□□□ -1.36
SRP54-212ENST00000556992 BEND4Q6ZU67 534 aa6.57□□□□□ -1.36
SRP54-212ENST00000556992 KLHL23Q8NBE8 558 aa6.57□□□□□ -1.36
SRP54-212ENST00000556992 NUDT16Q96DE0 195 aaKnown RBP6.57□□□□□ -1.36
SRP54-212ENST00000556992 FMNL2Q96PY5 1086 aa6.57□□□□□ -1.36
SRP54-212ENST00000556992 SLAIN2Q9P270 581 aa6.57□□□□□ -1.36
SRP54-212ENST00000556992 RNF114Q9Y508 228 aa6.57□□□□□ -1.36
SRP54-212ENST00000556992 FHOD3Q2V2M9 1422 aa6.57□□□□□ -1.36
SRP54-212ENST00000556992 ABCA5Q8WWZ7 1642 aa6.57□□□□□ -1.36
SRP54-212ENST00000556992 KIAA0586Q9BVV6 1533 aa6.56□□□□□ -1.36
SRP54-212ENST00000556992 SART1O43290 800 aaKnown RBP6.56□□□□□ -1.36
SRP54-212ENST00000556992 PTPRAP18433 802 aa6.56□□□□□ -1.36
SRP54-212ENST00000556992 UVSSAQ2YD98 709 aa6.56□□□□□ -1.36
SRP54-212ENST00000556992 MFSD14AQ96MC6 490 aa6.56□□□□□ -1.36
SRP54-212ENST00000556992 ELP3Q9H9T3 547 aa6.56□□□□□ -1.36
SRP54-212ENST00000556992 STIM2Q9P246 746 aa6.56□□□□□ -1.36
SRP54-212ENST00000556992 SEPT3Q9UH03 358 aa6.56□□□□□ -1.36
SRP54-212ENST00000556992 FNDC3AQ9Y2H6 1198 aaKnown RBP6.56□□□□□ -1.36
SRP54-212ENST00000556992 WDR97A6NE52 1622 aa6.56□□□□□ -1.36
SRP54-212ENST00000556992 WDR64B1ANS9 1081 aa6.55□□□□□ -1.36
SRP54-212ENST00000556992 H3BRJ5 948 aa6.55□□□□□ -1.36
SRP54-212ENST00000556992 GRIK1P39086 918 aa6.55□□□□□ -1.36
SRP54-212ENST00000556992 TXKP42681 527 aa6.55□□□□□ -1.36
SRP54-212ENST00000556992 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.55□□□□□ -1.36
SRP54-212ENST00000556992 DTX1Q86Y01 620 aa6.55□□□□□ -1.36
SRP54-212ENST00000556992 SHISA5Q8N114 240 aa6.55□□□□□ -1.36
SRP54-212ENST00000556992 C1orf127Q8N9H9 656 aa6.55□□□□□ -1.36
SRP54-212ENST00000556992 FAM83CQ9BQN1 747 aa6.55□□□□□ -1.36
SRP54-212ENST00000556992 FAM13BQ9NYF5 915 aa6.55□□□□□ -1.36
SRP54-212ENST00000556992 CDK11AQ9UQ88 783 aaPredicted RBP6.55□□□□□ -1.36
SRP54-212ENST00000556992 CCNB3Q8WWL7 1395 aa6.55□□□□□ -1.36
SRP54-212ENST00000556992 MAGI1Q96QZ7 1491 aaPredicted RBP6.54□□□□□ -1.36
SRP54-212ENST00000556992 NFKBIEO00221 500 aa6.54□□□□□ -1.36
SRP54-212ENST00000556992 SGO2Q562F6 1265 aa6.54□□□□□ -1.36
SRP54-212ENST00000556992 ZNF438Q7Z4V0 828 aa6.54□□□□□ -1.36
SRP54-212ENST00000556992 CLEC10AQ8IUN9 316 aa6.54□□□□□ -1.36
SRP54-212ENST00000556992 RUSC1Q9BVN2 902 aa6.54□□□□□ -1.36
SRP54-212ENST00000556992 ADAM19Q9H013 955 aa6.54□□□□□ -1.36
SRP54-212ENST00000556992 SYNJ2O15056 1496 aa6.53□□□□□ -1.36
SRP54-212ENST00000556992 LRRC9Q6ZRR7 1453 aa6.53□□□□□ -1.36
SRP54-212ENST00000556992 FYCO1Q9BQS8 1478 aa6.53□□□□□ -1.36
SRP54-212ENST00000556992 RRBP1Q9P2E9 1410 aaKnown RBP6.53□□□□□ -1.36
SRP54-212ENST00000556992 WNT11O96014 354 aa6.53□□□□□ -1.36
SRP54-212ENST00000556992 ELOAQ14241 798 aaKnown RBP6.53□□□□□ -1.36
SRP54-212ENST00000556992 INTS5Q6P9B9 1019 aaKnown RBP6.53□□□□□ -1.36
SRP54-212ENST00000556992 FBXL6Q8N531 539 aa6.53□□□□□ -1.36
SRP54-212ENST00000556992 SNAPC4Q5SXM2 1469 aa6.53□□□□□ -1.36
SRP54-212ENST00000556992 FAM177BA6PVY3 158 aa6.52□□□□□ -1.37
SRP54-212ENST00000556992 PIP4K2BP78356 416 aa6.52□□□□□ -1.37
SRP54-212ENST00000556992 SRPK2P78362 688 aaKnown RBP6.52□□□□□ -1.37
SRP54-212ENST00000556992 FAM50AQ14320 339 aaKnown RBP6.52□□□□□ -1.37
SRP54-212ENST00000556992 TMEM132AQ24JP5 1023 aa6.52□□□□□ -1.37
SRP54-212ENST00000556992 FDX2Q6P4F2 183 aa6.52□□□□□ -1.37
SRP54-212ENST00000556992 EDEM1Q92611 657 aa6.52□□□□□ -1.37
SRP54-212ENST00000556992 RNF208Q9H0X6 261 aa6.52□□□□□ -1.37
SRP54-212ENST00000556992 GGNBP2Q9H3C7 697 aa6.52□□□□□ -1.37
SRP54-212ENST00000556992 SALL4Q9UJQ4 1053 aa6.52□□□□□ -1.37
SRP54-212ENST00000556992 MTUS2Q5JR59 1369 aa6.52□□□□□ -1.37
SRP54-212ENST00000556992 GRIN2AQ12879 1464 aa6.52□□□□□ -1.37
SRP54-212ENST00000556992 CLSPNQ9HAW4 1339 aa6.51□□□□□ -1.37
SRP54-212ENST00000556992 CARMIL2Q6F5E8 1435 aa6.51□□□□□ -1.37
SRP54-212ENST00000556992 GAS2O43903 313 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms