RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 GNRH1P01148 92 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 PRMT2P55345 433 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 CRHR2Q13324 411 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 KIF22Q14807 665 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 PARP10Q53GL7 1025 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 SLC10A5Q5PT55 438 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 LDLRAD1Q5T700 205 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 SUSD4Q5VX71 490 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 NYAP1Q6ZVC0 841 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 SLC51AQ86UW1 340 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 IL17REQ8NFR9 667 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 ADAM33Q9BZ11 813 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 WDR70Q9NW82 654 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 ABCC4O15439 1325 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 IBTKQ9P2D0 1353 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-245ENST00000556958 NBPF26B4DH59 902 aa7.72□□□□□ -1.17
ATXN3-245ENST00000556958 C6orf229H3BNL8 230 aa7.72□□□□□ -1.17
ATXN3-245ENST00000556958 IGF2BP3O00425 579 aaKnown RBP eCLIP7.72□□□□□ -1.17
ATXN3-245ENST00000556958 ECE2O60344 883 aa7.72□□□□□ -1.17
ATXN3-245ENST00000556958 USP17L8P0C7I0 530 aa7.72□□□□□ -1.17
ATXN3-245ENST00000556958 GPTP24298 496 aa7.72□□□□□ -1.17
ATXN3-245ENST00000556958 GJA8P48165 433 aa7.72□□□□□ -1.17
ATXN3-245ENST00000556958 GRAPQ13588 217 aa7.72□□□□□ -1.17
ATXN3-245ENST00000556958 PRAMEF18Q5VWM3 479 aa7.72□□□□□ -1.17
ATXN3-245ENST00000556958 NBPF10Q6P3W6 841 aaKnown RBP7.72□□□□□ -1.17
ATXN3-245ENST00000556958 KIF6Q6ZMV9 814 aa7.72□□□□□ -1.17
ATXN3-245ENST00000556958 MORC1Q86VD1 984 aa7.72□□□□□ -1.17
ATXN3-245ENST00000556958 GAS2L2Q8NHY3 880 aa7.72□□□□□ -1.17
ATXN3-245ENST00000556958 GRAPLQ8TC17 118 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-245ENST00000556958 SH3TC2Q8TF17 1288 aa7.72□□□□□ -1.17
ATXN3-245ENST00000556958 ZC3H12CQ9C0D7 883 aaKnown RBP7.72□□□□□ -1.17
ATXN3-245ENST00000556958 MYOZ2Q9NPC6 264 aa7.72□□□□□ -1.17
ATXN3-245ENST00000556958 RABGEF1Q9UJ41 708 aa7.72□□□□□ -1.17
ATXN3-245ENST00000556958 NSFL1CQ9UNZ2 370 aaKnown RBP7.72□□□□□ -1.17
ATXN3-245ENST00000556958 RPTORQ8N122 1335 aa7.72□□□□□ -1.17
ATXN3-245ENST00000556958 ZNF609O15014 1411 aa7.71□□□□□ -1.17
ATXN3-245ENST00000556958 GJB1P08034 283 aa7.71□□□□□ -1.18
ATXN3-245ENST00000556958 HMOX1P09601 288 aa7.71□□□□□ -1.18
ATXN3-245ENST00000556958 UBE2Q1Q7Z7E8 422 aa7.71□□□□□ -1.18
ATXN3-245ENST00000556958 NGEFQ8N5V2 710 aa7.71□□□□□ -1.18
ATXN3-245ENST00000556958 UTP14AQ9BVJ6 771 aaKnown RBP7.71□□□□□ -1.18
ATXN3-245ENST00000556958 ZFYVE28Q9HCC9 887 aa7.71□□□□□ -1.18
ATXN3-245ENST00000556958 KCNQ5Q9NR82 932 aa7.71□□□□□ -1.18
ATXN3-245ENST00000556958 ANGEL1Q9UNK9 670 aaKnown RBP7.71□□□□□ -1.18
ATXN3-245ENST00000556958 MAP3K15Q6ZN16 1313 aa7.71□□□□□ -1.18
ATXN3-245ENST00000556958 ARFGEF2Q9Y6D5 1785 aa7.71□□□□□ -1.18
ATXN3-245ENST00000556958 BRCA2P51587 3418 aa7.71□□□□□ -1.18
ATXN3-245ENST00000556958 KCNQ3O43525 872 aa7.7□□□□□ -1.18
ATXN3-245ENST00000556958 PPP1R12BO60237 982 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-245ENST00000556958 NTSR2O95665 410 aa7.7□□□□□ -1.18
ATXN3-245ENST00000556958 PRKG1Q13976 671 aa7.7□□□□□ -1.18
ATXN3-245ENST00000556958 FAM109BQ6ICB4 259 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-245ENST00000556958 RSBN1LQ6PCB5 846 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-245ENST00000556958 ZNF34Q8IZ26 560 aa7.7□□□□□ -1.18
ATXN3-245ENST00000556958 OGFOD1Q8N543 542 aa7.7□□□□□ -1.18
ATXN3-245ENST00000556958 ZDHHC16Q969W1 377 aa7.7□□□□□ -1.18
ATXN3-245ENST00000556958 SHISA4Q96DD7 197 aa7.7□□□□□ -1.18
ATXN3-245ENST00000556958 GDF15Q99988 308 aa7.7□□□□□ -1.18
ATXN3-245ENST00000556958 AKAP11Q9UKA4 1901 aa7.7□□□□□ -1.18
ATXN3-245ENST00000556958 HTTP42858 3142 aa7.69□□□□□ -1.18
ATXN3-245ENST00000556958 TTC28Q96AY4 2481 aa7.69□□□□□ -1.18
ATXN3-245ENST00000556958 TNFRSF10AO00220 468 aa7.69□□□□□ -1.18
ATXN3-245ENST00000556958 FARP2O94887 1054 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-245ENST00000556958 HOXD10P28358 340 aa7.69□□□□□ -1.18
ATXN3-245ENST00000556958 MMP14P50281 582 aa7.69□□□□□ -1.18
ATXN3-245ENST00000556958 UBXN2AP68543 259 aa7.69□□□□□ -1.18
ATXN3-245ENST00000556958 PROX2Q3B8N5 592 aa7.69□□□□□ -1.18
ATXN3-245ENST00000556958 TDHQ8IZJ6 230 aa7.69□□□□□ -1.18
ATXN3-245ENST00000556958 WNK4Q96J92 1243 aa7.69□□□□□ -1.18
ATXN3-245ENST00000556958 RNF208Q9H0X6 261 aa7.69□□□□□ -1.18
ATXN3-245ENST00000556958 SCN7AQ01118 1682 aa7.69□□□□□ -1.18
ATXN3-245ENST00000556958 RTL9Q8NET4 1388 aa7.69□□□□□ -1.18
ATXN3-245ENST00000556958 TESPA1A2RU30 521 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-245ENST00000556958 MTFR1Q15390 333 aa7.68□□□□□ -1.18
ATXN3-245ENST00000556958 MAP3K11Q16584 847 aa7.68□□□□□ -1.18
ATXN3-245ENST00000556958 GIGYF2Q6Y7W6 1299 aaKnown RBP7.68□□□□□ -1.18
ATXN3-245ENST00000556958 HELBQ8NG08 1087 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-245ENST00000556958 TRIM47Q96LD4 638 aa7.68□□□□□ -1.18
ATXN3-245ENST00000556958 PRKD2Q9BZL6 878 aa7.68□□□□□ -1.18
ATXN3-245ENST00000556958 BIN2Q9UBW5 565 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-245ENST00000556958 POLLQ9UGP5 575 aa7.68□□□□□ -1.18
ATXN3-245ENST00000556958 SCAF8Q9UPN6 1271 aaKnown RBP7.68□□□□□ -1.18
ATXN3-245ENST00000556958 ANKRD26Q9UPS8 1709 aa7.68□□□□□ -1.18
ATXN3-245ENST00000556958 UBN2Q6ZU65 1347 aa7.68□□□□□ -1.18
ATXN3-245ENST00000556958 SCN11AQ9UI33 1791 aa7.68□□□□□ -1.18
ATXN3-245ENST00000556958 CACNA1SQ13698 1873 aa7.68□□□□□ -1.18
ATXN3-245ENST00000556958 PAPPA2Q9BXP8 1791 aa7.67□□□□□ -1.18
ATXN3-245ENST00000556958 TMEM265A0A087WTH1 108 aa7.67□□□□□ -1.18
ATXN3-245ENST00000556958 PPP1R3GB7ZBB8 358 aa7.67□□□□□ -1.18
ATXN3-245ENST00000556958 CCL5P13501 91 aa7.67□□□□□ -1.18
ATXN3-245ENST00000556958 GRK4P32298 578 aa7.67□□□□□ -1.18
ATXN3-245ENST00000556958 TAF1CQ15572 869 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-245ENST00000556958 NBPF9Q3BBW0 867 aa7.67□□□□□ -1.18
ATXN3-245ENST00000556958 SUPT20HL1Q3ZLR7 823 aa7.67□□□□□ -1.18
ATXN3-245ENST00000556958 APOBEC3FQ8IUX4 373 aaKnown RBP7.67□□□□□ -1.18
ATXN3-245ENST00000556958 RAET1EQ8TD07 263 aa7.67□□□□□ -1.18
ATXN3-245ENST00000556958 ZFRQ96KR1 1074 aaKnown RBP7.67□□□□□ -1.18
ATXN3-245ENST00000556958 GMLQ99445 158 aa7.67□□□□□ -1.18
ATXN3-245ENST00000556958 PTPN18Q99952 460 aa7.67□□□□□ -1.18
ATXN3-245ENST00000556958 ZBTB3Q9H5J0 574 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms