RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 SH2B1Q9NRF2 756 aaPredicted RBP21.79■■□□□ 1.08
SDR39U1-220ENST00000556548 PDE6AP16499 860 aa21.78■■□□□ 1.08
SDR39U1-220ENST00000556548 NFIXQ14938 502 aa21.78■■□□□ 1.08
SDR39U1-220ENST00000556548 ZSCAN25Q6NSZ9 544 aa21.78■■□□□ 1.08
SDR39U1-220ENST00000556548 E7EWF7 191 aa21.78■■□□□ 1.08
SDR39U1-220ENST00000556548 FGAP02671 866 aa21.78■■□□□ 1.08
SDR39U1-220ENST00000556548 GJB2P29033 226 aa21.77■■□□□ 1.08
SDR39U1-220ENST00000556548 ANKRD1Q15327 319 aa21.77■■□□□ 1.08
SDR39U1-220ENST00000556548 CHST3Q7LGC8 479 aa21.77■■□□□ 1.08
SDR39U1-220ENST00000556548 RPS8P62241 208 aaKnown RBP21.77■■□□□ 1.07
SDR39U1-220ENST00000556548 FGD1P98174 961 aa21.77■■□□□ 1.07
SDR39U1-220ENST00000556548 MAGEB6Q8N7X4 407 aa21.77■■□□□ 1.07
SDR39U1-220ENST00000556548 MYO5AQ9Y4I1 1855 aaKnown RBP21.76■■□□□ 1.07
SDR39U1-220ENST00000556548 BRWD3Q6RI45 1802 aa21.75■■□□□ 1.07
SDR39U1-220ENST00000556548 APPP05067 770 aa21.75■■□□□ 1.07
SDR39U1-220ENST00000556548 SLC51AQ86UW1 340 aa21.75■■□□□ 1.07
SDR39U1-220ENST00000556548 TCRBV5S4A2TA0A5A2 114 aa21.74■■□□□ 1.07
SDR39U1-220ENST00000556548 SYT1P21579 422 aa21.74■■□□□ 1.07
SDR39U1-220ENST00000556548 UBE3CQ15386 1083 aa21.74■■□□□ 1.07
SDR39U1-220ENST00000556548 BRF1Q92994 677 aa21.74■■□□□ 1.07
SDR39U1-220ENST00000556548 ALDH8A1Q9H2A2 487 aaPredicted RBP21.74■■□□□ 1.07
SDR39U1-220ENST00000556548 PRPF40AO75400 957 aaKnown RBP21.74■■□□□ 1.07
SDR39U1-220ENST00000556548 MAP3K12Q12852 859 aa21.74■■□□□ 1.07
SDR39U1-220ENST00000556548 C4AP0C0L4 1744 aa21.74■■□□□ 1.07
SDR39U1-220ENST00000556548 ARAP2Q8WZ64 1704 aa21.74■■□□□ 1.07
SDR39U1-220ENST00000556548 KLRK1P26718 216 aa21.73■■□□□ 1.07
SDR39U1-220ENST00000556548 IMMTQ16891 758 aaKnown RBP21.73■■□□□ 1.07
SDR39U1-220ENST00000556548 DHX32Q7L7V1 743 aaKnown RBP21.73■■□□□ 1.07
SDR39U1-220ENST00000556548 CTNNA3Q9UI47 895 aa21.73■■□□□ 1.07
SDR39U1-220ENST00000556548 TM4SF1P30408 202 aa21.73■■□□□ 1.07
SDR39U1-220ENST00000556548 VPS37DQ86XT2 251 aa21.73■■□□□ 1.07
SDR39U1-220ENST00000556548 CNBD1Q8NA66 436 aa21.73■■□□□ 1.07
SDR39U1-220ENST00000556548 WDR33Q9C0J8 1336 aaKnown RBP21.73■■□□□ 1.07
SDR39U1-220ENST00000556548 CASZ1Q86V15 1759 aa21.72■■□□□ 1.07
SDR39U1-220ENST00000556548 CARMIL3Q8ND23 1372 aa21.72■■□□□ 1.07
SDR39U1-220ENST00000556548 UBE4AQ14139 1066 aa21.72■■□□□ 1.07
SDR39U1-220ENST00000556548 SLC27A3Q5K4L6 730 aa21.72■■□□□ 1.07
SDR39U1-220ENST00000556548 PROM2Q8N271 834 aa21.72■■□□□ 1.07
SDR39U1-220ENST00000556548 AIDAQ96BJ3 306 aa21.72■■□□□ 1.07
SDR39U1-220ENST00000556548 LMBRD1Q9NUN5 540 aa21.72■■□□□ 1.07
SDR39U1-220ENST00000556548 LRP2BPQ9P2M1 347 aa21.72■■□□□ 1.07
SDR39U1-220ENST00000556548 ABCF2Q9UG63 623 aa21.72■■□□□ 1.07
SDR39U1-220ENST00000556548 DDX49Q9Y6V7 483 aaKnown RBP21.72■■□□□ 1.07
SDR39U1-220ENST00000556548 STX6O43752 255 aa21.72■■□□□ 1.07
SDR39U1-220ENST00000556548 GYS1P13807 737 aa21.72■■□□□ 1.07
SDR39U1-220ENST00000556548 COL24A1Q17RW2 1714 aa21.71■■□□□ 1.07
SDR39U1-220ENST00000556548 MYH7P12883 1935 aa21.71■■□□□ 1.07
SDR39U1-220ENST00000556548 HMGB1P09429 215 aaKnown RBP21.71■■□□□ 1.07
SDR39U1-220ENST00000556548 NCLP19338 710 aaKnown RBP21.71■■□□□ 1.07
SDR39U1-220ENST00000556548 PKNOX2Q96KN3 472 aa21.71■■□□□ 1.07
SDR39U1-220ENST00000556548 ADRA2BP18089 450 aa21.71■■□□□ 1.07
SDR39U1-220ENST00000556548 PTMSP20962 102 aa21.71■■□□□ 1.07
SDR39U1-220ENST00000556548 APOBRQ0VD83 1088 aa21.71■■□□□ 1.07
SDR39U1-220ENST00000556548 TXNRD1Q16881 649 aa21.71■■□□□ 1.07
SDR39U1-220ENST00000556548 CAVIN4Q5BKX8 364 aa21.71■■□□□ 1.07
SDR39U1-220ENST00000556548 FAM84BQ96KN1 310 aaPredicted RBP21.71■■□□□ 1.07
SDR39U1-220ENST00000556548 TFCP2L1Q9NZI6 479 aa21.71■■□□□ 1.07
SDR39U1-220ENST00000556548 NAP1L2Q9ULW6 460 aaPredicted RBP21.71■■□□□ 1.07
SDR39U1-220ENST00000556548 ZNF213O14771 459 aa21.7■■□□□ 1.06
SDR39U1-220ENST00000556548 MBD4O95243 580 aa21.7■■□□□ 1.06
SDR39U1-220ENST00000556548 RBM6P78332 1123 aaKnown RBP21.7■■□□□ 1.06
SDR39U1-220ENST00000556548 EXOSC10Q01780 885 aaKnown RBP21.7■■□□□ 1.06
SDR39U1-220ENST00000556548 ARMT1Q9H993 441 aa21.7■■□□□ 1.06
SDR39U1-220ENST00000556548 SKOR2Q2VWA4 1001 aaPredicted RBP21.69■■□□□ 1.06
SDR39U1-220ENST00000556548 STRBPQ96SI9 672 aaKnown RBP21.69■■□□□ 1.06
SDR39U1-220ENST00000556548 BRPF3Q9ULD4 1205 aa21.69■■□□□ 1.06
SDR39U1-220ENST00000556548 ZSCAN22P10073 491 aaPredicted RBP21.69■■□□□ 1.06
SDR39U1-220ENST00000556548 PRR5LQ6MZQ0 368 aa21.69■■□□□ 1.06
SDR39U1-220ENST00000556548 MIGA1Q8NAN2 632 aa21.69■■□□□ 1.06
SDR39U1-220ENST00000556548 GDPD2Q9HCC8 539 aa21.69■■□□□ 1.06
SDR39U1-220ENST00000556548 GPHNQ9NQX3 736 aaPredicted RBP21.69■■□□□ 1.06
SDR39U1-220ENST00000556548 GNL3LQ9NVN8 582 aaKnown RBP21.69■■□□□ 1.06
SDR39U1-220ENST00000556548 VPS37CA5D8V6 355 aaPredicted RBP21.68■■□□□ 1.06
SDR39U1-220ENST00000556548 DENND2AQ9ULE3 1009 aa21.68■■□□□ 1.06
SDR39U1-220ENST00000556548 ZNF804BA4D1E1 1349 aa21.68■■□□□ 1.06
SDR39U1-220ENST00000556548 TNRC6CQ9HCJ0 1690 aaKnown RBP21.68■■□□□ 1.06
SDR39U1-220ENST00000556548 JAK2O60674 1132 aa21.67■■□□□ 1.06
SDR39U1-220ENST00000556548 ZNF772Q68DY9 489 aaPredicted RBP21.67■■□□□ 1.06
SDR39U1-220ENST00000556548 GTF3C6Q969F1 213 aa21.67■■□□□ 1.06
SDR39U1-220ENST00000556548 RAI14Q9P0K7 980 aa21.67■■□□□ 1.06
SDR39U1-220ENST00000556548 PRKAB2O43741 272 aa21.67■■□□□ 1.06
SDR39U1-220ENST00000556548 SERPINB2P05120 415 aa21.67■■□□□ 1.06
SDR39U1-220ENST00000556548 LAMA4Q16363 1823 aa21.67■■□□□ 1.06
SDR39U1-220ENST00000556548 COL1A1P02452 1464 aaPredicted RBP21.66■■□□□ 1.06
SDR39U1-220ENST00000556548 SCRN1Q12765 414 aa21.66■■□□□ 1.06
SDR39U1-220ENST00000556548 LARP1BQ659C4 914 aaKnown RBP21.66■■□□□ 1.06
SDR39U1-220ENST00000556548 LCORLQ8N3X6 602 aa21.66■■□□□ 1.06
SDR39U1-220ENST00000556548 NBPF3Q9H094 633 aa21.66■■□□□ 1.06
SDR39U1-220ENST00000556548 APBA3O96018 575 aa21.66■■□□□ 1.06
SDR39U1-220ENST00000556548 CCT2P78371 535 aaKnown RBP21.66■■□□□ 1.06
SDR39U1-220ENST00000556548 TXNRD3Q86VQ6 643 aa21.66■■□□□ 1.06
SDR39U1-220ENST00000556548 MTMR6Q9Y217 621 aa21.66■■□□□ 1.06
SDR39U1-220ENST00000556548 JAG2Q9Y219 1238 aa21.66■■□□□ 1.06
SDR39U1-220ENST00000556548 UBR3Q6ZT12 1888 aa21.65■■□□□ 1.06
SDR39U1-220ENST00000556548 PPFIA3O75145 1194 aa21.65■■□□□ 1.06
SDR39U1-220ENST00000556548 CYP7A1P22680 504 aa21.65■■□□□ 1.06
SDR39U1-220ENST00000556548 ADGRA1Q86SQ6 560 aa21.65■■□□□ 1.06
SDR39U1-220ENST00000556548 TBC1D10CQ8IV04 446 aa21.65■■□□□ 1.06
SDR39U1-220ENST00000556548 DDX11Q96FC9 970 aa21.65■■□□□ 1.06
SDR39U1-220ENST00000556548 ANKRD2Q9GZV1 360 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms