RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 TXNRD3Q86VQ6 643 aa5.51□□□□□ -1.53
TGFB3-205ENST00000556507 HIRIP3Q9BW71 556 aaPredicted RBP5.51□□□□□ -1.53
TGFB3-205ENST00000556507 SEMA6BQ9H3T3 888 aa5.51□□□□□ -1.53
TGFB3-205ENST00000556507 GPATCH8Q9UKJ3 1502 aaKnown RBP5.51□□□□□ -1.53
TGFB3-205ENST00000556507 DENND4BO75064 1496 aaPredicted RBP5.51□□□□□ -1.53
TGFB3-205ENST00000556507 CEP170Q5SW79 1584 aa5.5□□□□□ -1.53
TGFB3-205ENST00000556507 ZNF644Q9H582 1327 aaPredicted RBP5.5□□□□□ -1.53
TGFB3-205ENST00000556507 NCOA1Q15788 1441 aa5.5□□□□□ -1.53
TGFB3-205ENST00000556507 PRG4Q92954 1404 aaPredicted RBP5.5□□□□□ -1.53
TGFB3-205ENST00000556507 KDM5BQ9UGL1 1544 aa5.5□□□□□ -1.53
TGFB3-205ENST00000556507 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
TGFB3-205ENST00000556507 HSPA5P11021 654 aaKnown RBP5.5□□□□□ -1.53
TGFB3-205ENST00000556507 MZF1P28698 734 aaPredicted RBP5.5□□□□□ -1.53
TGFB3-205ENST00000556507 EIF1AXP47813 144 aaKnown RBP5.5□□□□□ -1.53
TGFB3-205ENST00000556507 MTMR3Q13615 1198 aa5.5□□□□□ -1.53
TGFB3-205ENST00000556507 AAMPQ13685 434 aa5.5□□□□□ -1.53
TGFB3-205ENST00000556507 COL13A1Q5TAT6 717 aaPredicted RBP5.5□□□□□ -1.53
TGFB3-205ENST00000556507 ALKBH2Q6NS38 261 aa5.5□□□□□ -1.53
TGFB3-205ENST00000556507 NCAPG2Q86XI2 1143 aa5.5□□□□□ -1.53
TGFB3-205ENST00000556507 CACTIN-AS1Q8N1I8 211 aa5.5□□□□□ -1.53
TGFB3-205ENST00000556507 ARID3AQ99856 593 aa5.5□□□□□ -1.53
TGFB3-205ENST00000556507 KRTAP4-6Q9BYQ5 205 aa5.5□□□□□ -1.53
TGFB3-205ENST00000556507 TMEM63CQ9P1W3 806 aa5.5□□□□□ -1.53
TGFB3-205ENST00000556507 SUPT16HQ9Y5B9 1047 aaKnown RBP5.5□□□□□ -1.53
TGFB3-205ENST00000556507 ANKRD30AQ9BXX3 1397 aa5.5□□□□□ -1.53
TGFB3-205ENST00000556507 KDM6BO15054 1643 aa5.49□□□□□ -1.53
TGFB3-205ENST00000556507 ADCY10Q96PN6 1610 aa5.49□□□□□ -1.53
TGFB3-205ENST00000556507 DEAF1O75398 565 aaPredicted RBP5.49□□□□□ -1.53
TGFB3-205ENST00000556507 SMNDC1O75940 238 aaKnown RBP eCLIP5.49□□□□□ -1.53
TGFB3-205ENST00000556507 PDGFAP04085 211 aa5.49□□□□□ -1.53
TGFB3-205ENST00000556507 CYP2E1P05181 493 aaPredicted RBP5.49□□□□□ -1.53
TGFB3-205ENST00000556507 RSPO4Q2I0M5 234 aaPredicted RBP5.49□□□□□ -1.53
TGFB3-205ENST00000556507 C8orf34Q49A92 452 aa5.49□□□□□ -1.53
TGFB3-205ENST00000556507 CEP135Q66GS9 1140 aa5.49□□□□□ -1.53
TGFB3-205ENST00000556507 PHLDB3Q6NSJ2 640 aa5.49□□□□□ -1.53
TGFB3-205ENST00000556507 IGF2-ASQ6U949 168 aa5.49□□□□□ -1.53
TGFB3-205ENST00000556507 XKR5Q6UX68 686 aa5.49□□□□□ -1.53
TGFB3-205ENST00000556507 GGNBP2Q9H3C7 697 aa5.49□□□□□ -1.53
TGFB3-205ENST00000556507 TRIM33Q9UPN9 1127 aa5.49□□□□□ -1.53
TGFB3-205ENST00000556507 ADGRL2O95490 1459 aa5.49□□□□□ -1.53
TGFB3-205ENST00000556507 RPRD2Q5VT52 1461 aaKnown RBP5.49□□□□□ -1.53
TGFB3-205ENST00000556507 PLB1Q6P1J6 1458 aa5.49□□□□□ -1.53
TGFB3-205ENST00000556507 ITSN2Q9NZM3 1697 aa5.49□□□□□ -1.53
TGFB3-205ENST00000556507 ABCA8O94911 1581 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 ATP10BO94823 1461 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 CAMSAP2Q08AD1 1489 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 FAM13AO94988 1023 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 KIF4AO95239 1232 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 ABL1P00519 1130 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 TSPY4P0CV99 314 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 TSPY10P0CW01 314 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 ATP11AP98196 1134 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 SF3B2Q13435 895 aaKnown RBP5.48□□□□□ -1.53
TGFB3-205ENST00000556507 NKAPLQ5M9Q1 402 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 WFDC12Q8WWY7 111 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 LACRTQ9GZZ8 138 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 MUC3BQ9H195 1237 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 RASSF4Q9H2L5 321 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 CNTN3Q9P232 1028 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 KANSL3Q9P2N6 904 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 USTQ9Y2C2 406 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 PPME1Q9Y570 386 aa5.48□□□□□ -1.53
TGFB3-205ENST00000556507 A6NHS1 94 aa5.47□□□□□ -1.53
TGFB3-205ENST00000556507 DLL1O00548 723 aa5.47□□□□□ -1.53
TGFB3-205ENST00000556507 NPR3P17342 541 aa5.47□□□□□ -1.53
TGFB3-205ENST00000556507 CES1P23141 567 aa5.47□□□□□ -1.53
TGFB3-205ENST00000556507 IREB2P48200 963 aaKnown RBP5.47□□□□□ -1.53
TGFB3-205ENST00000556507 FKBP4Q02790 459 aaKnown RBP eCLIP5.47□□□□□ -1.53
TGFB3-205ENST00000556507 B4GALNT3Q6L9W6 998 aa5.47□□□□□ -1.53
TGFB3-205ENST00000556507 MAP4K3Q8IVH8 894 aa5.47□□□□□ -1.53
TGFB3-205ENST00000556507 CEP120Q8N960 986 aa5.47□□□□□ -1.53
TGFB3-205ENST00000556507 C1orf127Q8N9H9 656 aa5.47□□□□□ -1.53
TGFB3-205ENST00000556507 DCAF11Q8TEB1 546 aa5.47□□□□□ -1.53
TGFB3-205ENST00000556507 PBX4Q9BYU1 374 aa5.47□□□□□ -1.53
TGFB3-205ENST00000556507 SRA1Q9HD15 236 aaKnown RBP5.47□□□□□ -1.53
TGFB3-205ENST00000556507 POLIQ9UNA4 740 aa5.47□□□□□ -1.53
TGFB3-205ENST00000556507 PTPRGP23470 1445 aa5.47□□□□□ -1.53
TGFB3-205ENST00000556507 KIAA1107Q9UPP5 1409 aa5.47□□□□□ -1.53
TGFB3-205ENST00000556507 WASHC2AQ641Q2 1341 aa5.47□□□□□ -1.53
TGFB3-205ENST00000556507 PZPP20742 1482 aa5.46□□□□□ -1.53
TGFB3-205ENST00000556507 SHANK2Q9UPX8 1470 aa5.46□□□□□ -1.53
TGFB3-205ENST00000556507 FAM177BA6PVY3 158 aa5.46□□□□□ -1.54
TGFB3-205ENST00000556507 LINC01387J3KSC0 135 aa5.46□□□□□ -1.54
TGFB3-205ENST00000556507 NEFLP07196 543 aa5.46□□□□□ -1.54
TGFB3-205ENST00000556507 CDC27P30260 824 aa5.46□□□□□ -1.54
TGFB3-205ENST00000556507 SETDB1Q15047 1291 aa5.46□□□□□ -1.54
TGFB3-205ENST00000556507 NBPF8Q3BBV2 869 aa5.46□□□□□ -1.54
TGFB3-205ENST00000556507 PMEPA1Q969W9 287 aa5.46□□□□□ -1.54
TGFB3-205ENST00000556507 TP53INP1Q96A56 240 aa5.46□□□□□ -1.54
TGFB3-205ENST00000556507 MRPL18Q9H0U6 180 aaKnown RBP5.46□□□□□ -1.54
TGFB3-205ENST00000556507 ANO2Q9NQ90 1003 aa5.46□□□□□ -1.54
TGFB3-205ENST00000556507 SALL4Q9UJQ4 1053 aa5.46□□□□□ -1.54
TGFB3-205ENST00000556507 ANKRD50Q9ULJ7 1429 aa5.46□□□□□ -1.54
TGFB3-205ENST00000556507 ADGBQ8N7X0 1667 aa5.46□□□□□ -1.54
TGFB3-205ENST00000556507 ARID4BQ4LE39 1312 aaPredicted RBP5.46□□□□□ -1.54
TGFB3-205ENST00000556507 ABCC10Q5T3U5 1492 aa5.45□□□□□ -1.54
TGFB3-205ENST00000556507 KIF14Q15058 1648 aa5.45□□□□□ -1.54
TGFB3-205ENST00000556507 CCDC7Q96M83 1385 aa5.45□□□□□ -1.54
TGFB3-205ENST00000556507 DYRK3O43781 588 aa5.45□□□□□ -1.54
TGFB3-205ENST00000556507 ITGB7P26010 798 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms