RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 FRAT2O75474 233 aaPredicted RBP18.84■□□□□ 0.61
ACTN1-217ENST00000556203 FKBP1AP62942 108 aaKnown RBP18.84■□□□□ 0.61
ACTN1-217ENST00000556203 FMR1Q06787 632 aaKnown RBP eCLIP18.84■□□□□ 0.614e-6■■■■□ 21.6
ACTN1-217ENST00000556203 C20orf194Q5TEA3 1177 aa18.84■□□□□ 0.61
ACTN1-217ENST00000556203 CREBZFQ9NS37 354 aa18.84■□□□□ 0.61
ACTN1-217ENST00000556203 HDAC9Q9UKV0 1011 aa18.84■□□□□ 0.61
ACTN1-217ENST00000556203 DDX19BQ9UMR2 479 aa18.84■□□□□ 0.61
ACTN1-217ENST00000556203 ASTN2O75129 1339 aaPredicted RBP18.83■□□□□ 0.61
ACTN1-217ENST00000556203 F8W031 263 aaPredicted RBP18.83■□□□□ 0.6
ACTN1-217ENST00000556203 TFCP2Q12800 502 aa18.83■□□□□ 0.6
ACTN1-217ENST00000556203 G3BP1Q13283 466 aaKnown RBP eCLIP18.83■□□□□ 0.6
ACTN1-217ENST00000556203 SCARF1Q14162 830 aa18.83■□□□□ 0.6
ACTN1-217ENST00000556203 CDC37L1Q7L3B6 337 aa18.83■□□□□ 0.6
ACTN1-217ENST00000556203 SSH3Q8TE77 659 aa18.83■□□□□ 0.6
ACTN1-217ENST00000556203 DCPSQ96C86 337 aaKnown RBP18.83■□□□□ 0.6
ACTN1-217ENST00000556203 GGA3Q9NZ52 723 aa18.83■□□□□ 0.6
ACTN1-217ENST00000556203 TMEM88BA6NKF7 163 aa18.82■□□□□ 0.6
ACTN1-217ENST00000556203 MMP14P50281 582 aa18.82■□□□□ 0.6
ACTN1-217ENST00000556203 CHAF1AQ13111 956 aaPredicted RBP18.82■□□□□ 0.6
ACTN1-217ENST00000556203 PDE3AQ14432 1141 aa18.82■□□□□ 0.6
ACTN1-217ENST00000556203 MFSD14BQ5SR56 506 aa18.82■□□□□ 0.6
ACTN1-217ENST00000556203 CEP85Q6P2H3 762 aa18.82■□□□□ 0.6
ACTN1-217ENST00000556203 USP48Q86UV5 1035 aa18.82■□□□□ 0.6
ACTN1-217ENST00000556203 ZNF646O15015 1829 aaPredicted RBP18.81■□□□□ 0.6
ACTN1-217ENST00000556203 ANGEL2Q5VTE6 544 aaKnown RBP18.81■□□□□ 0.6
ACTN1-217ENST00000556203 KRT26Q7Z3Y9 468 aa18.81■□□□□ 0.6
ACTN1-217ENST00000556203 DNAJC5GQ8N7S2 189 aa18.81■□□□□ 0.6
ACTN1-217ENST00000556203 AKAP2Q9Y2D5 859 aa18.81■□□□□ 0.6
ACTN1-217ENST00000556203 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.81■□□□□ 0.6
ACTN1-217ENST00000556203 SURF6O75683 361 aaKnown RBP18.8■□□□□ 0.6
ACTN1-217ENST00000556203 ADORA1P30542 326 aa18.8■□□□□ 0.6
ACTN1-217ENST00000556203 TIMM10P62072 90 aa18.8■□□□□ 0.6
ACTN1-217ENST00000556203 NBPF9Q3BBW0 867 aa18.8■□□□□ 0.6
ACTN1-217ENST00000556203 ZBTB40Q9NUA8 1239 aa18.8■□□□□ 0.6
ACTN1-217ENST00000556203 A0A1B0GUL7 405 aa18.79■□□□□ 0.6
ACTN1-217ENST00000556203 ADM5C9JUS6 153 aa18.79■□□□□ 0.6
ACTN1-217ENST00000556203 WNT10BO00744 389 aa18.79■□□□□ 0.6
ACTN1-217ENST00000556203 OS9Q13438 667 aaPredicted RBP18.79■□□□□ 0.6
ACTN1-217ENST00000556203 DLK2Q6UY11 383 aa18.79■□□□□ 0.6
ACTN1-217ENST00000556203 SULF1Q8IWU6 871 aa18.79■□□□□ 0.6
ACTN1-217ENST00000556203 CHMP4BQ9H444 224 aaKnown RBP18.79■□□□□ 0.6
ACTN1-217ENST00000556203 CELF2O95319 508 aaKnown RBP18.78■□□□□ 0.6
ACTN1-217ENST00000556203 PHKA1P46020 1223 aa18.78■□□□□ 0.6
ACTN1-217ENST00000556203 DLGAP5Q15398 846 aa18.78■□□□□ 0.6
ACTN1-217ENST00000556203 CST9Q5W186 159 aa18.78■□□□□ 0.6
ACTN1-217ENST00000556203 TBC1D22AQ8WUA7 517 aa18.78■□□□□ 0.6
ACTN1-217ENST00000556203 KLRG1Q96E93 195 aa18.78■□□□□ 0.6
ACTN1-217ENST00000556203 ZNF408Q9H9D4 720 aa18.78■□□□□ 0.6
ACTN1-217ENST00000556203 GNL3LQ9NVN8 582 aaKnown RBP18.78■□□□□ 0.6
ACTN1-217ENST00000556203 TTF2Q9UNY4 1162 aaKnown RBP18.78■□□□□ 0.6
ACTN1-217ENST00000556203 CFAP100Q494V2 611 aa18.77■□□□□ 0.6
ACTN1-217ENST00000556203 CCDC102BQ68D86 513 aa18.77■□□□□ 0.6
ACTN1-217ENST00000556203 XAGE2Q96GT9 111 aa18.77■□□□□ 0.6
ACTN1-217ENST00000556203 ZBED3Q96IU2 234 aaPredicted RBP18.77■□□□□ 0.6
ACTN1-217ENST00000556203 NEUROD6Q96NK8 337 aa18.77■□□□□ 0.6
ACTN1-217ENST00000556203 ABT1Q9ULW3 272 aaKnown RBP18.77■□□□□ 0.6
ACTN1-217ENST00000556203 NOP58Q9Y2X3 529 aaKnown RBP18.77■□□□□ 0.6
ACTN1-217ENST00000556203 PITPNM2Q9BZ72 1349 aa18.76■□□□□ 0.59
ACTN1-217ENST00000556203 GRIK5Q16478 980 aa18.76■□□□□ 0.59
ACTN1-217ENST00000556203 MKRN1Q9UHC7 482 aaKnown RBP18.76■□□□□ 0.59
ACTN1-217ENST00000556203 SCAF8Q9UPN6 1271 aaKnown RBP18.76■□□□□ 0.59
ACTN1-217ENST00000556203 PCDHAC2Q9Y5I4 1007 aa18.76■□□□□ 0.59
ACTN1-217ENST00000556203 COL1A1P02452 1464 aaPredicted RBP18.76■□□□□ 0.59
ACTN1-217ENST00000556203 RBM5P52756 815 aaKnown RBP eCLIP18.75■□□□□ 0.59
ACTN1-217ENST00000556203 RRP1P56182 461 aaKnown RBP18.75■□□□□ 0.59
ACTN1-217ENST00000556203 RPAP2Q8IXW5 612 aaPredicted RBP18.75■□□□□ 0.59
ACTN1-217ENST00000556203 MTMR14Q8NCE2 650 aa18.75■□□□□ 0.59
ACTN1-217ENST00000556203 SPDYE2BA6NHP3 402 aa18.74■□□□□ 0.59
ACTN1-217ENST00000556203 SEMA3EO15041 775 aa18.74■□□□□ 0.59
ACTN1-217ENST00000556203 SPDYE6P0CI01 402 aa18.74■□□□□ 0.59
ACTN1-217ENST00000556203 WDR66Q8TBY9 1149 aa18.74■□□□□ 0.59
ACTN1-217ENST00000556203 SERPINA10Q9UK55 444 aa18.74■□□□□ 0.59
ACTN1-217ENST00000556203 DENND2AQ9ULE3 1009 aa18.74■□□□□ 0.59
ACTN1-217ENST00000556203 CNTNAP1P78357 1384 aa18.73■□□□□ 0.59
ACTN1-217ENST00000556203 HMMRO75330 724 aa18.73■□□□□ 0.59
ACTN1-217ENST00000556203 TNNI3KQ59H18 835 aa18.73■□□□□ 0.59
ACTN1-217ENST00000556203 GORABQ5T7V8 394 aa18.73■□□□□ 0.59
ACTN1-217ENST00000556203 SIRT2Q8IXJ6 389 aa18.73■□□□□ 0.59
ACTN1-217ENST00000556203 CDCA5Q96FF9 252 aa18.73■□□□□ 0.59
ACTN1-217ENST00000556203 PRMT6Q96LA8 375 aaPredicted RBP18.73■□□□□ 0.59
ACTN1-217ENST00000556203 EXOC6BQ9Y2D4 811 aa18.73■□□□□ 0.59
ACTN1-217ENST00000556203 SUGT1Q9Y2Z0 365 aa18.73■□□□□ 0.59
ACTN1-217ENST00000556203 FPGT-TNNI3KV9GXZ4 949 aa18.73■□□□□ 0.59
ACTN1-217ENST00000556203 MYO1BO43795 1136 aa18.72■□□□□ 0.59
ACTN1-217ENST00000556203 CRKP46108 304 aa18.72■□□□□ 0.59
ACTN1-217ENST00000556203 RASGRF1Q13972 1273 aa18.72■□□□□ 0.59
ACTN1-217ENST00000556203 GPR108Q9NPR9 543 aa18.72■□□□□ 0.59
ACTN1-217ENST00000556203 TLL2Q9Y6L7 1015 aa18.72■□□□□ 0.59
ACTN1-217ENST00000556203 AOX1Q06278 1338 aa18.72■□□□□ 0.59
ACTN1-217ENST00000556203 CLRN2A0PK11 232 aa18.71■□□□□ 0.59
ACTN1-217ENST00000556203 RASSF10A6NK89 507 aa18.71■□□□□ 0.59
ACTN1-217ENST00000556203 ZBTB22O15209 634 aa18.71■□□□□ 0.59
ACTN1-217ENST00000556203 DEFB115Q30KQ5 88 aa18.71■□□□□ 0.59
ACTN1-217ENST00000556203 APOBEC3FQ8IUX4 373 aaKnown RBP18.71■□□□□ 0.59
ACTN1-217ENST00000556203 MAST3O60307 1309 aa18.71■□□□□ 0.59
ACTN1-217ENST00000556203 CEP350Q5VT06 3117 aa18.7■□□□□ 0.58
ACTN1-217ENST00000556203 HSP90AB4PQ58FF6 505 aa18.7■□□□□ 0.58
ACTN1-217ENST00000556203 PRAMEF18Q5VWM3 479 aa18.7■□□□□ 0.58
ACTN1-217ENST00000556203 SAPCD2Q86UD0 394 aa18.7■□□□□ 0.58
ACTN1-217ENST00000556203 ERC1Q8IUD2 1116 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms