RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 ZNF213O14771 459 aa11.96□□□□□ -0.49
EFCAB11-209ENST00000556005 PHF14O94880 888 aa11.96□□□□□ -0.49
EFCAB11-209ENST00000556005 PDE6AP16499 860 aa11.96□□□□□ -0.49
EFCAB11-209ENST00000556005 PDCP20941 246 aa11.96□□□□□ -0.49
EFCAB11-209ENST00000556005 RPS8P62241 208 aaKnown RBP11.96□□□□□ -0.49
EFCAB11-209ENST00000556005 EXOSC10Q01780 885 aaKnown RBP11.96□□□□□ -0.49
EFCAB11-209ENST00000556005 ST3GAL1Q11201 340 aa11.96□□□□□ -0.49
EFCAB11-209ENST00000556005 CAVIN4Q5BKX8 364 aa11.96□□□□□ -0.49
EFCAB11-209ENST00000556005 SLC27A3Q5K4L6 730 aa11.96□□□□□ -0.49
EFCAB11-209ENST00000556005 L1TD1Q5T7N2 865 aaKnown RBP11.96□□□□□ -0.49
EFCAB11-209ENST00000556005 KRT27Q7Z3Y8 459 aa11.96□□□□□ -0.49
EFCAB11-209ENST00000556005 ILDR1Q86SU0 546 aaPredicted RBP11.96□□□□□ -0.49
EFCAB11-209ENST00000556005 MINPP1Q9UNW1 487 aa11.96□□□□□ -0.49
EFCAB11-209ENST00000556005 GOLGA6L3A6NEY3 463 aa11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 FOXP2O15409 715 aa11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 TTLL5Q6EMB2 1281 aa11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 AMIGO3Q86WK7 504 aa11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 BRF1Q92994 677 aa11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 AIDAQ96BJ3 306 aa11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 LRRC4BQ9NT99 713 aa11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 ISY1Q9ULR0 285 aaKnown RBP11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 TCRBV5S4A2TA0A5A2 114 aa11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 STK3Q13188 491 aa11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 LARP1BQ659C4 914 aaKnown RBP11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 FBXL16Q8N461 479 aa11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 CELF1Q92879 486 aaKnown RBP11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 GTF3C6Q969F1 213 aa11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 CHMP4CQ96CF2 233 aa11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 AGXT2Q9BYV1 514 aa11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 ANKRD2Q9GZV1 360 aa11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 WWC3Q9ULE0 1092 aa11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 C4BP0C0L5 1744 aa11.95□□□□□ -0.5
EFCAB11-209ENST00000556005 TAF1LQ8IZX4 1826 aa11.94□□□□□ -0.5
EFCAB11-209ENST00000556005 CARMIL3Q8ND23 1372 aa11.94□□□□□ -0.5
EFCAB11-209ENST00000556005 F13A1P00488 732 aa11.94□□□□□ -0.5
EFCAB11-209ENST00000556005 APPP05067 770 aa11.94□□□□□ -0.5
EFCAB11-209ENST00000556005 PPP4R3CPQ6ZMV5 832 aa11.94□□□□□ -0.5
EFCAB11-209ENST00000556005 VPS37DQ86XT2 251 aa11.94□□□□□ -0.5
EFCAB11-209ENST00000556005 MAGEB6Q8N7X4 407 aa11.94□□□□□ -0.5
EFCAB11-209ENST00000556005 MYH7P12883 1935 aa11.94□□□□□ -0.5
EFCAB11-209ENST00000556005 ZNF804BA4D1E1 1349 aa11.94□□□□□ -0.5
EFCAB11-209ENST00000556005 A0A0G2JLW4 131 aa11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 NCLP19338 710 aaKnown RBP11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 NCOA7Q8NI08 942 aa11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 STRBPQ96SI9 672 aaKnown RBP11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 LRRC2Q9BYS8 371 aa11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 LRP2BPQ9P2M1 347 aa11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 FSD2A1L4K1 749 aa11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 PATL2C9JE40 543 aaKnown RBP11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 PFKFB2O60825 505 aa11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 MBD3O95983 291 aa11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 MCM5P33992 734 aa11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 HAND2P61296 217 aa11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 TRDNQ13061 729 aa11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 NFIXQ14938 502 aa11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 RALYLQ86SE5 291 aaKnown RBP11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 LLPHQ9BRT6 129 aaKnown RBP11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 MTMR6Q9Y217 621 aa11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 COL24A1Q17RW2 1714 aa11.93□□□□□ -0.5
EFCAB11-209ENST00000556005 TRIM37O94972 964 aa11.92□□□□□ -0.5
EFCAB11-209ENST00000556005 GNAT2P19087 354 aa11.92□□□□□ -0.5
EFCAB11-209ENST00000556005 GYG1P46976 350 aa11.92□□□□□ -0.5
EFCAB11-209ENST00000556005 ALX1Q15699 326 aa11.92□□□□□ -0.5
EFCAB11-209ENST00000556005 CNBD1Q8NA66 436 aa11.92□□□□□ -0.5
EFCAB11-209ENST00000556005 ZNF274Q96GC6 653 aaPredicted RBP11.92□□□□□ -0.5
EFCAB11-209ENST00000556005 DENND2AQ9ULE3 1009 aa11.92□□□□□ -0.5
EFCAB11-209ENST00000556005 VPS37CA5D8V6 355 aaPredicted RBP11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 SEMA3EO15041 775 aa11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 TM4SF1P30408 202 aa11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 SCRN1Q12765 414 aa11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 FOXD4L6Q3SYB3 417 aaPredicted RBP11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 FOXD4L3Q6VB84 417 aaPredicted RBP11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 CCDC24Q8N4L8 307 aa11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 CHAMP1Q96JM3 812 aa11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 FAM84BQ96KN1 310 aaPredicted RBP11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 ZMYM6O95789 1325 aa11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 WDR19Q8NEZ3 1342 aa11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 MBD4O95243 580 aa11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 EVCP57679 992 aa11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 APOBRQ0VD83 1088 aa11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 CSPP1Q1MSJ5 1256 aa11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 CHST3Q7LGC8 479 aa11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 MB21D2Q8IYB1 491 aaPredicted RBP11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 GPT2Q8TD30 523 aa11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 NACAP1Q9BZK3 213 aa11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 COL4A1P02462 1669 aa11.91□□□□□ -0.5
EFCAB11-209ENST00000556005 PNPLA7Q6ZV29 1317 aa11.9□□□□□ -0.5
EFCAB11-209ENST00000556005 PRC1O43663 620 aa11.9□□□□□ -0.5
EFCAB11-209ENST00000556005 MRE11P49959 708 aa11.9□□□□□ -0.5
EFCAB11-209ENST00000556005 ZNF772Q68DY9 489 aaPredicted RBP11.9□□□□□ -0.5
EFCAB11-209ENST00000556005 CAVIN1Q6NZI2 390 aaKnown RBP11.9□□□□□ -0.5
EFCAB11-209ENST00000556005 FBXO33Q7Z6M2 555 aa11.9□□□□□ -0.5
EFCAB11-209ENST00000556005 USP48Q86UV5 1035 aa11.9□□□□□ -0.5
EFCAB11-209ENST00000556005 IFNL3Q8IZI9 196 aa11.9□□□□□ -0.5
EFCAB11-209ENST00000556005 FAM184AQ8NB25 1140 aa11.9□□□□□ -0.5
EFCAB11-209ENST00000556005 TMEM87AQ8NBN3 555 aa11.9□□□□□ -0.5
EFCAB11-209ENST00000556005 NAPBQ9H115 298 aa11.9□□□□□ -0.5
EFCAB11-209ENST00000556005 ABCF2Q9UG63 623 aa11.9□□□□□ -0.5
EFCAB11-209ENST00000556005 IQSEC3Q9UPP2 1182 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms