RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ANO6Q4KMQ2 910 aa8.23□□□□□ -1.09
TDP1-213ENST00000555880 DRC7Q8IY82 874 aa8.23□□□□□ -1.09
TDP1-213ENST00000555880 SPC24Q8NBT2 197 aa8.23□□□□□ -1.09
TDP1-213ENST00000555880 MYRIPQ8NFW9 859 aa8.23□□□□□ -1.09
TDP1-213ENST00000555880 DDX11Q96FC9 970 aa8.23□□□□□ -1.09
TDP1-213ENST00000555880 CCDC9Q9Y3X0 531 aaKnown RBP8.23□□□□□ -1.09
TDP1-213ENST00000555880 NDUFB9Q9Y6M9 179 aa8.23□□□□□ -1.09
TDP1-213ENST00000555880 CPDO75976 1380 aa8.22□□□□□ -1.09
TDP1-213ENST00000555880 CTAGE5O15320 804 aa8.22□□□□□ -1.09
TDP1-213ENST00000555880 PPP1R37O75864 691 aa8.22□□□□□ -1.09
TDP1-213ENST00000555880 FOXO4P98177 505 aa8.22□□□□□ -1.09
TDP1-213ENST00000555880 ATL3Q6DD88 541 aa8.22□□□□□ -1.09
TDP1-213ENST00000555880 RBM43Q6ZSC3 357 aaKnown RBP8.22□□□□□ -1.09
TDP1-213ENST00000555880 CCDC191Q8NCU4 936 aa8.22□□□□□ -1.09
TDP1-213ENST00000555880 ZNF396Q96N95 335 aaPredicted RBP8.22□□□□□ -1.09
TDP1-213ENST00000555880 SEC62Q99442 399 aaKnown RBP8.22□□□□□ -1.09
TDP1-213ENST00000555880 PRDM11Q9NQV5 511 aa8.22□□□□□ -1.09
TDP1-213ENST00000555880 NAP1L2Q9ULW6 460 aaPredicted RBP8.22□□□□□ -1.09
TDP1-213ENST00000555880 UBR2Q8IWV8 1755 aa8.22□□□□□ -1.09
TDP1-213ENST00000555880 GLI3P10071 1580 aa8.22□□□□□ -1.09
TDP1-213ENST00000555880 TJP1Q07157 1748 aa8.22□□□□□ -1.09
TDP1-213ENST00000555880 EYA2O00167 538 aa8.21□□□□□ -1.09
TDP1-213ENST00000555880 CIAO1O76071 339 aa8.21□□□□□ -1.09
TDP1-213ENST00000555880 IFIT1P09914 478 aaKnown RBP8.21□□□□□ -1.09
TDP1-213ENST00000555880 SCRN1Q12765 414 aa8.21□□□□□ -1.09
TDP1-213ENST00000555880 ZMYM1Q5SVZ6 1142 aa8.21□□□□□ -1.09
TDP1-213ENST00000555880 GORABQ5T7V8 394 aa8.21□□□□□ -1.09
TDP1-213ENST00000555880 CCDC73Q6ZRK6 1079 aa8.21□□□□□ -1.09
TDP1-213ENST00000555880 ATG9AQ7Z3C6 839 aa8.21□□□□□ -1.09
TDP1-213ENST00000555880 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.21□□□□□ -1.09
TDP1-213ENST00000555880 LUZP1Q86V48 1076 aa8.21□□□□□ -1.09
TDP1-213ENST00000555880 SMARCC2Q8TAQ2 1214 aa8.21□□□□□ -1.09
TDP1-213ENST00000555880 TRIM5Q9C035 493 aa8.21□□□□□ -1.09
TDP1-213ENST00000555880 CBX8Q9HC52 389 aa8.21□□□□□ -1.09
TDP1-213ENST00000555880 ATG3Q9NT62 314 aa8.21□□□□□ -1.09
TDP1-213ENST00000555880 PTPDC1A2A3K4 754 aa8.21□□□□□ -1.1
TDP1-213ENST00000555880 C2orf72A6NCS6 295 aa8.21□□□□□ -1.1
TDP1-213ENST00000555880 ERVV-2B6SEH9 535 aa8.21□□□□□ -1.1
TDP1-213ENST00000555880 GOLGA6L19H0YKK7 550 aa8.21□□□□□ -1.1
TDP1-213ENST00000555880 RNF113AO15541 343 aaKnown RBP8.21□□□□□ -1.1
TDP1-213ENST00000555880 NR1I2O75469 434 aa8.21□□□□□ -1.1
TDP1-213ENST00000555880 ZNF165P49910 485 aa8.21□□□□□ -1.1
TDP1-213ENST00000555880 GPR153Q6NV75 609 aa8.21□□□□□ -1.1
TDP1-213ENST00000555880 NSUN7Q8NE18 718 aaKnown RBP8.21□□□□□ -1.1
TDP1-213ENST00000555880 TDRD7Q8NHU6 1098 aaKnown RBP8.21□□□□□ -1.1
TDP1-213ENST00000555880 ZCRB1Q8TBF4 217 aaKnown RBP8.21□□□□□ -1.1
TDP1-213ENST00000555880 KIAA1524Q8TCG1 905 aa8.21□□□□□ -1.1
TDP1-213ENST00000555880 LRRC2Q9BYS8 371 aa8.21□□□□□ -1.1
TDP1-213ENST00000555880 CTNNA3Q9UI47 895 aa8.21□□□□□ -1.1
TDP1-213ENST00000555880 STRCP1A6NGW2 1772 aa8.21□□□□□ -1.1
TDP1-213ENST00000555880 SOS2Q07890 1332 aaPredicted RBP8.21□□□□□ -1.1
TDP1-213ENST00000555880 A0A1B0GUL7 405 aa8.2□□□□□ -1.1
TDP1-213ENST00000555880 NBPF26B4DH59 902 aa8.2□□□□□ -1.1
TDP1-213ENST00000555880 E7EWF7 191 aa8.2□□□□□ -1.1
TDP1-213ENST00000555880 KIF3CO14782 793 aa8.2□□□□□ -1.1
TDP1-213ENST00000555880 AP5Z1O43299 807 aa8.2□□□□□ -1.1
TDP1-213ENST00000555880 KINO60870 393 aaKnown RBP8.2□□□□□ -1.1
TDP1-213ENST00000555880 APOBRQ0VD83 1088 aa8.2□□□□□ -1.1
TDP1-213ENST00000555880 STX1AQ16623 288 aa8.2□□□□□ -1.1
TDP1-213ENST00000555880 CCDC158Q5M9N0 1113 aa8.2□□□□□ -1.1
TDP1-213ENST00000555880 NBPF14Q5TI25 921 aa8.2□□□□□ -1.1
TDP1-213ENST00000555880 NBPF10Q6P3W6 841 aaKnown RBP8.2□□□□□ -1.1
TDP1-213ENST00000555880 STOX1Q6ZVD7 989 aa8.2□□□□□ -1.1
TDP1-213ENST00000555880 C17orf53Q8N3J3 647 aaPredicted RBP8.2□□□□□ -1.1
TDP1-213ENST00000555880 NBPF15Q8N660 670 aa8.2□□□□□ -1.1
TDP1-213ENST00000555880 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.2□□□□□ -1.1
TDP1-213ENST00000555880 ZNF274Q96GC6 653 aaPredicted RBP8.2□□□□□ -1.1
TDP1-213ENST00000555880 PGBD1Q96JS3 809 aa8.2□□□□□ -1.1
TDP1-213ENST00000555880 CEP126Q9P2H0 1117 aa8.2□□□□□ -1.1
TDP1-213ENST00000555880 AKAP2Q9Y2D5 859 aa8.2□□□□□ -1.1
TDP1-213ENST00000555880 PAPPAQ13219 1627 aa8.2□□□□□ -1.1
TDP1-213ENST00000555880 DHX16O60231 1041 aaKnown RBP8.19□□□□□ -1.1
TDP1-213ENST00000555880 ZFYP08048 801 aaPredicted RBP8.19□□□□□ -1.1
TDP1-213ENST00000555880 HSPD1P10809 573 aaKnown RBP8.19□□□□□ -1.1
TDP1-213ENST00000555880 PTGS1P23219 599 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 GTF2F1P35269 517 aaKnown RBP eCLIP8.19□□□□□ -1.1
TDP1-213ENST00000555880 ZNF75DP51815 510 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 EVA1CP58658 441 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 TIMM10P62072 90 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 EXOSC10Q01780 885 aaKnown RBP8.19□□□□□ -1.1
TDP1-213ENST00000555880 CEBPZQ03701 1054 aaKnown RBP8.19□□□□□ -1.1
TDP1-213ENST00000555880 MMRN1Q13201 1228 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 CCDC57Q2TAC2 916 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 TTC39AQ5SRH9 613 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 VARS2Q5ST30 1063 aaKnown RBP8.19□□□□□ -1.1
TDP1-213ENST00000555880 TTLL7Q6ZT98 887 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 TOM1L2Q6ZVM7 507 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 CCAR1Q8IX12 1150 aaKnown RBP8.19□□□□□ -1.1
TDP1-213ENST00000555880 HS6ST3Q8IZP7 471 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 AGXT2Q9BYV1 514 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 DNAJC25Q9H1X3 360 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 KCNF1Q9H3M0 494 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 ZBTB3Q9H5J0 574 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 RCOR1Q9UKL0 485 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 MAST3O60307 1309 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 CHGBP05060 677 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 ME1P48163 572 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 FOSBP53539 338 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 CCT2P78371 535 aaKnown RBP8.19□□□□□ -1.1
TDP1-213ENST00000555880 ZRSR1Q15695 479 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms