RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 CWF19L2Q2TBE0 894 aaKnown RBP13.84□□□□□ -0.19
TDP1-212ENST00000555565 WDR63Q8IWG1 891 aa13.84□□□□□ -0.19
TDP1-212ENST00000555565 ZNF333Q96JL9 665 aa13.84□□□□□ -0.19
TDP1-212ENST00000555565 COA1Q9GZY4 146 aa13.84□□□□□ -0.19
TDP1-212ENST00000555565 BSDC1Q9NW68 430 aaPredicted RBP13.84□□□□□ -0.19
TDP1-212ENST00000555565 MYH3P11055 1940 aa13.84□□□□□ -0.19
TDP1-212ENST00000555565 NEURL1BA8MQ27 555 aa13.83□□□□□ -0.2
TDP1-212ENST00000555565 CTSWP56202 376 aa13.83□□□□□ -0.2
TDP1-212ENST00000555565 FLIIQ13045 1269 aa13.83□□□□□ -0.2
TDP1-212ENST00000555565 TTLL5Q6EMB2 1281 aa13.83□□□□□ -0.2
TDP1-212ENST00000555565 KIAA0825Q8IV33 1275 aa13.83□□□□□ -0.2
TDP1-212ENST00000555565 TTLL11Q8NHH1 800 aa13.83□□□□□ -0.2
TDP1-212ENST00000555565 EFCC1Q9HA90 598 aa13.83□□□□□ -0.2
TDP1-212ENST00000555565 PCDHAC2Q9Y5I4 1007 aa13.83□□□□□ -0.2
TDP1-212ENST00000555565 UNCXA6NJT0 531 aa13.82□□□□□ -0.2
TDP1-212ENST00000555565 H0YGN5 161 aa13.82□□□□□ -0.2
TDP1-212ENST00000555565 VAMP4O75379 141 aa13.82□□□□□ -0.2
TDP1-212ENST00000555565 KLRK1P26718 216 aa13.82□□□□□ -0.2
TDP1-212ENST00000555565 SP3Q02447 781 aa13.82□□□□□ -0.2
TDP1-212ENST00000555565 MTMR14Q8NCE2 650 aa13.82□□□□□ -0.2
TDP1-212ENST00000555565 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
TDP1-212ENST00000555565 TRIOBPQ9H2D6 2365 aa13.82□□□□□ -0.2
TDP1-212ENST00000555565 H7C1W4 665 aa13.81□□□□□ -0.2
TDP1-212ENST00000555565 USP2O75604 605 aaPredicted RBP13.81□□□□□ -0.2
TDP1-212ENST00000555565 EXOSC9Q06265 439 aaKnown RBP13.81□□□□□ -0.2
TDP1-212ENST00000555565 CERS5Q8N5B7 392 aa13.81□□□□□ -0.2
TDP1-212ENST00000555565 FBXW7Q969H0 707 aa13.81□□□□□ -0.2
TDP1-212ENST00000555565 GREM2Q9H772 168 aa13.81□□□□□ -0.2
TDP1-212ENST00000555565 AOX1Q06278 1338 aa13.81□□□□□ -0.2
TDP1-212ENST00000555565 COL1A1P02452 1464 aaPredicted RBP13.8□□□□□ -0.2
TDP1-212ENST00000555565 FKBP5Q13451 457 aaPredicted RBP13.8□□□□□ -0.2
TDP1-212ENST00000555565 GCKRQ14397 625 aa13.8□□□□□ -0.2
TDP1-212ENST00000555565 NBPF12Q5TAG4 269 aaPredicted RBP13.8□□□□□ -0.2
TDP1-212ENST00000555565 UBE3BQ7Z3V4 1068 aa13.8□□□□□ -0.2
TDP1-212ENST00000555565 FAM9BQ8IZU0 186 aa13.8□□□□□ -0.2
TDP1-212ENST00000555565 DNAAF4Q8WXU2 420 aa13.8□□□□□ -0.2
TDP1-212ENST00000555565 MS4A4AQ96JQ5 239 aa13.8□□□□□ -0.2
TDP1-212ENST00000555565 CDC5LQ99459 802 aaKnown RBP13.8□□□□□ -0.2
TDP1-212ENST00000555565 TMEM106CQ9BVX2 250 aa13.8□□□□□ -0.2
TDP1-212ENST00000555565 CEP290O15078 2479 aa13.8□□□□□ -0.2
TDP1-212ENST00000555565 SPEF2Q9C093 1822 aa13.79□□□□□ -0.2
TDP1-212ENST00000555565 PPP1R12BO60237 982 aaPredicted RBP13.79□□□□□ -0.2
TDP1-212ENST00000555565 GTF2IP78347 998 aa13.79□□□□□ -0.2
TDP1-212ENST00000555565 LINS1Q8NG48 757 aa13.79□□□□□ -0.2
TDP1-212ENST00000555565 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.79□□□□□ -0.2
TDP1-212ENST00000555565 LEMD3Q9Y2U8 911 aa13.79□□□□□ -0.2
TDP1-212ENST00000555565 PPP2R3BQ9Y5P8 575 aa13.79□□□□□ -0.2
TDP1-212ENST00000555565 PTCH2Q9Y6C5 1203 aa13.79□□□□□ -0.2
TDP1-212ENST00000555565 IRS2Q9Y4H2 1338 aa13.79□□□□□ -0.2
TDP1-212ENST00000555565 CASP7P55210 303 aa13.78□□□□□ -0.2
TDP1-212ENST00000555565 DLGAP5Q15398 846 aa13.78□□□□□ -0.2
TDP1-212ENST00000555565 OTUD7BQ6GQQ9 843 aa13.78□□□□□ -0.2
TDP1-212ENST00000555565 PRMT6Q96LA8 375 aaPredicted RBP13.78□□□□□ -0.2
TDP1-212ENST00000555565 PLA2G12BQ9BX93 195 aa13.78□□□□□ -0.2
TDP1-212ENST00000555565 ZNF804BA4D1E1 1349 aa13.78□□□□□ -0.2
TDP1-212ENST00000555565 COL6A3P12111 3177 aa13.77□□□□□ -0.21
TDP1-212ENST00000555565 PRO3102Q9H379 93 aa13.77□□□□□ -0.21
TDP1-212ENST00000555565 MYH16Q9H6N6 1097 aa13.77□□□□□ -0.21
TDP1-212ENST00000555565 CD209Q9NNX6 404 aa13.77□□□□□ -0.21
TDP1-212ENST00000555565 RBM27Q9P2N5 1060 aaKnown RBP13.77□□□□□ -0.21
TDP1-212ENST00000555565 CLRN2A0PK11 232 aa13.76□□□□□ -0.21
TDP1-212ENST00000555565 SPDYE2BA6NHP3 402 aa13.76□□□□□ -0.21
TDP1-212ENST00000555565 F6X3S4 739 aa13.76□□□□□ -0.21
TDP1-212ENST00000555565 CSF1RP07333 972 aa13.76□□□□□ -0.21
TDP1-212ENST00000555565 SPDYE6P0CI01 402 aa13.76□□□□□ -0.21
TDP1-212ENST00000555565 SUPT20HL1Q3ZLR7 823 aa13.76□□□□□ -0.21
TDP1-212ENST00000555565 SLC9C1Q4G0N8 1177 aa13.76□□□□□ -0.21
TDP1-212ENST00000555565 CHRDL2Q6WN34 429 aa13.76□□□□□ -0.21
TDP1-212ENST00000555565 NBPF11Q86T75 865 aa13.76□□□□□ -0.21
TDP1-212ENST00000555565 ANKRD13AQ8IZ07 590 aa13.76□□□□□ -0.21
TDP1-212ENST00000555565 BRI3BPQ8WY22 251 aa13.76□□□□□ -0.21
TDP1-212ENST00000555565 LAMA3Q16787 3333 aa13.76□□□□□ -0.21
TDP1-212ENST00000555565 A0A0C4DFX4 3053 aa13.75□□□□□ -0.21
TDP1-212ENST00000555565 SNAP23O00161 211 aa13.75□□□□□ -0.21
TDP1-212ENST00000555565 DLL1O00548 723 aa13.75□□□□□ -0.21
TDP1-212ENST00000555565 ITGA6P23229 1130 aa13.75□□□□□ -0.21
TDP1-212ENST00000555565 IREB2P48200 963 aaKnown RBP13.75□□□□□ -0.21
TDP1-212ENST00000555565 CFAP100Q494V2 611 aa13.75□□□□□ -0.21
TDP1-212ENST00000555565 BEND3Q5T5X7 828 aa13.75□□□□□ -0.21
TDP1-212ENST00000555565 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.75□□□□□ -0.21
TDP1-212ENST00000555565 CNKSR2Q8WXI2 1034 aa13.75□□□□□ -0.21
TDP1-212ENST00000555565 OPTNQ96CV9 577 aa13.75□□□□□ -0.21
TDP1-212ENST00000555565 ZNF521Q96K83 1311 aa13.74□□□□□ -0.21
TDP1-212ENST00000555565 IGHMBP2P38935 993 aaKnown RBP13.74□□□□□ -0.21
TDP1-212ENST00000555565 RASA3Q14644 834 aa13.74□□□□□ -0.21
TDP1-212ENST00000555565 SLC4A8Q2Y0W8 1093 aa13.74□□□□□ -0.21
TDP1-212ENST00000555565 CDAN1Q8IWY9 1227 aa13.74□□□□□ -0.21
TDP1-212ENST00000555565 FAM43AQ8N2R8 423 aa13.74□□□□□ -0.21
TDP1-212ENST00000555565 SH3TC2Q8TF17 1288 aa13.74□□□□□ -0.21
TDP1-212ENST00000555565 SHISA4Q96DD7 197 aa13.74□□□□□ -0.21
TDP1-212ENST00000555565 TEPSINQ96N21 525 aa13.74□□□□□ -0.21
TDP1-212ENST00000555565 ARHGAP39Q9C0H5 1083 aa13.74□□□□□ -0.21
TDP1-212ENST00000555565 ELP3Q9H9T3 547 aa13.74□□□□□ -0.21
TDP1-212ENST00000555565 MYCP01106 439 aaPredicted RBP13.73□□□□□ -0.21
TDP1-212ENST00000555565 FOXO4P98177 505 aa13.73□□□□□ -0.21
TDP1-212ENST00000555565 C15orf52Q6ZUT6 534 aaKnown RBP13.73□□□□□ -0.21
TDP1-212ENST00000555565 UBE2Q1Q7Z7E8 422 aa13.73□□□□□ -0.21
TDP1-212ENST00000555565 ANKRD2Q9GZV1 360 aa13.73□□□□□ -0.21
TDP1-212ENST00000555565 F8W031 263 aaPredicted RBP13.72□□□□□ -0.21
TDP1-212ENST00000555565 IL1R1P14778 569 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms