RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 POLR2AP24928 1970 aaKnown RBP14.97□□□□□ -0.01
SRP54-206ENST00000555317 ITGBL1O95965 494 aaPredicted RBP14.97□□□□□ -0.01
SRP54-206ENST00000555317 FGFR2P21802 821 aa14.97□□□□□ -0.01
SRP54-206ENST00000555317 BCAMP50895 628 aa14.97□□□□□ -0.01
SRP54-206ENST00000555317 FKBP1AP62942 108 aaKnown RBP14.97□□□□□ -0.01
SRP54-206ENST00000555317 ATP8B2P98198 1209 aa14.97□□□□□ -0.01
SRP54-206ENST00000555317 CHAF1AQ13111 956 aaPredicted RBP14.97□□□□□ -0.01
SRP54-206ENST00000555317 PDE3AQ14432 1141 aa14.97□□□□□ -0.01
SRP54-206ENST00000555317 MFSD14BQ5SR56 506 aa14.97□□□□□ -0.01
SRP54-206ENST00000555317 CDC37L1Q7L3B6 337 aa14.97□□□□□ -0.01
SRP54-206ENST00000555317 FBXO33Q7Z6M2 555 aa14.97□□□□□ -0.01
SRP54-206ENST00000555317 TDRD7Q8NHU6 1098 aaKnown RBP14.97□□□□□ -0.01
SRP54-206ENST00000555317 CREBZFQ9NS37 354 aa14.97□□□□□ -0.01
SRP54-206ENST00000555317 IQSEC3Q9UPP2 1182 aaPredicted RBP14.97□□□□□ -0.01
SRP54-206ENST00000555317 TRPM7Q96QT4 1865 aa14.97□□□□□ -0.01
SRP54-206ENST00000555317 TMEM88BA6NKF7 163 aa14.96□□□□□ -0.01
SRP54-206ENST00000555317 F8W031 263 aaPredicted RBP14.96□□□□□ -0.01
SRP54-206ENST00000555317 EGFRP00533 1210 aa14.96□□□□□ -0.01
SRP54-206ENST00000555317 TFCP2Q12800 502 aa14.96□□□□□ -0.01
SRP54-206ENST00000555317 KRT26Q7Z3Y9 468 aa14.96□□□□□ -0.01
SRP54-206ENST00000555317 SULF1Q8IWU6 871 aa14.96□□□□□ -0.01
SRP54-206ENST00000555317 TBC1D22AQ8WUA7 517 aa14.96□□□□□ -0.01
SRP54-206ENST00000555317 GGA3Q9NZ52 723 aa14.96□□□□□ -0.01
SRP54-206ENST00000555317 FAM205AQ6ZU69 1335 aa14.95□□□□□ -0.02
SRP54-206ENST00000555317 ARAP2Q8WZ64 1704 aa14.95□□□□□ -0.02
SRP54-206ENST00000555317 SURF6O75683 361 aaKnown RBP14.95□□□□□ -0.02
SRP54-206ENST00000555317 HTRA3P83110 453 aa14.95□□□□□ -0.02
SRP54-206ENST00000555317 SCARF1Q14162 830 aa14.95□□□□□ -0.02
SRP54-206ENST00000555317 POLA2Q14181 598 aa14.95□□□□□ -0.02
SRP54-206ENST00000555317 GORABQ5T7V8 394 aa14.95□□□□□ -0.02
SRP54-206ENST00000555317 SSH3Q8TE77 659 aa14.95□□□□□ -0.02
SRP54-206ENST00000555317 GLIS2Q9BZE0 524 aaPredicted RBP14.95□□□□□ -0.02
SRP54-206ENST00000555317 PGAP2Q9UHJ9 254 aa14.95□□□□□ -0.02
SRP54-206ENST00000555317 TRAF5O00463 557 aa14.94□□□□□ -0.02
SRP54-206ENST00000555317 HMMRO75330 724 aa14.94□□□□□ -0.02
SRP54-206ENST00000555317 RBM5P52756 815 aaKnown RBP eCLIP14.94□□□□□ -0.02
SRP54-206ENST00000555317 DLGAP5Q15398 846 aa14.94□□□□□ -0.02
SRP54-206ENST00000555317 CEP85Q6P2H3 762 aa14.94□□□□□ -0.02
SRP54-206ENST00000555317 USP48Q86UV5 1035 aa14.94□□□□□ -0.02
SRP54-206ENST00000555317 NEUROD6Q96NK8 337 aa14.94□□□□□ -0.02
SRP54-206ENST00000555317 ZNF408Q9H9D4 720 aa14.94□□□□□ -0.02
SRP54-206ENST00000555317 ABT1Q9ULW3 272 aaKnown RBP14.94□□□□□ -0.02
SRP54-206ENST00000555317 A0A1B0GUL7 405 aa14.93□□□□□ -0.02
SRP54-206ENST00000555317 MYO1BO43795 1136 aa14.93□□□□□ -0.02
SRP54-206ENST00000555317 CELF2O95319 508 aaKnown RBP14.93□□□□□ -0.02
SRP54-206ENST00000555317 ANGEL2Q5VTE6 544 aaKnown RBP14.93□□□□□ -0.02
SRP54-206ENST00000555317 CERS5Q8N5B7 392 aa14.93□□□□□ -0.02
SRP54-206ENST00000555317 TTF2Q9UNY4 1162 aaKnown RBP14.93□□□□□ -0.02
SRP54-206ENST00000555317 PITPNM2Q9BZ72 1349 aa14.92□□□□□ -0.02
SRP54-206ENST00000555317 C20orf194Q5TEA3 1177 aa14.92□□□□□ -0.02
SRP54-206ENST00000555317 WDR66Q8TBY9 1149 aa14.92□□□□□ -0.02
SRP54-206ENST00000555317 MAST3O60307 1309 aa14.92□□□□□ -0.02
SRP54-206ENST00000555317 ADM5C9JUS6 153 aa14.91□□□□□ -0.02
SRP54-206ENST00000555317 WNT10BO00744 389 aa14.91□□□□□ -0.02
SRP54-206ENST00000555317 SEMA3EO15041 775 aa14.91□□□□□ -0.02
SRP54-206ENST00000555317 ADORA1P30542 326 aa14.91□□□□□ -0.02
SRP54-206ENST00000555317 RRP1P56182 461 aaKnown RBP14.91□□□□□ -0.02
SRP54-206ENST00000555317 TIMM10P62072 90 aa14.91□□□□□ -0.02
SRP54-206ENST00000555317 NBPF9Q3BBW0 867 aa14.91□□□□□ -0.02
SRP54-206ENST00000555317 CFAP100Q494V2 611 aa14.91□□□□□ -0.02
SRP54-206ENST00000555317 HSP90AB4PQ58FF6 505 aa14.91□□□□□ -0.02
SRP54-206ENST00000555317 ERC1Q8IUD2 1116 aa14.91□□□□□ -0.02
SRP54-206ENST00000555317 APOBEC3FQ8IUX4 373 aaKnown RBP14.91□□□□□ -0.02
SRP54-206ENST00000555317 RPAP2Q8IXW5 612 aaPredicted RBP14.91□□□□□ -0.02
SRP54-206ENST00000555317 KLRG1Q96E93 195 aa14.91□□□□□ -0.02
SRP54-206ENST00000555317 XAGE2Q96GT9 111 aa14.91□□□□□ -0.02
SRP54-206ENST00000555317 ZBTB40Q9NUA8 1239 aa14.91□□□□□ -0.02
SRP54-206ENST00000555317 DENND2AQ9ULE3 1009 aa14.91□□□□□ -0.02
SRP54-206ENST00000555317 ASTN2O75129 1339 aaPredicted RBP14.91□□□□□ -0.02
SRP54-206ENST00000555317 ECM29Q5VYK3 1845 aa14.9□□□□□ -0.02
SRP54-206ENST00000555317 PHKA1P46020 1223 aa14.9□□□□□ -0.02
SRP54-206ENST00000555317 CCDC102BQ68D86 513 aa14.9□□□□□ -0.02
SRP54-206ENST00000555317 PAXIP1Q6ZW49 1069 aaPredicted RBP14.9□□□□□ -0.02
SRP54-206ENST00000555317 SERPINA10Q9UK55 444 aa14.9□□□□□ -0.02
SRP54-206ENST00000555317 NOP58Q9Y2X3 529 aaKnown RBP14.9□□□□□ -0.02
SRP54-206ENST00000555317 SUGT1Q9Y2Z0 365 aa14.9□□□□□ -0.02
SRP54-206ENST00000555317 FMR1Q06787 632 aaKnown RBP eCLIP14.89□□□□□ -0.032e-7■□□□□ 8.6
SRP54-206ENST00000555317 ZGPATQ8N5A5 531 aaKnown RBP14.89□□□□□ -0.03
SRP54-206ENST00000555317 MTMR14Q8NCE2 650 aa14.89□□□□□ -0.03
SRP54-206ENST00000555317 GPR108Q9NPR9 543 aa14.89□□□□□ -0.03
SRP54-206ENST00000555317 MKRN1Q9UHC7 482 aaKnown RBP14.89□□□□□ -0.03
SRP54-206ENST00000555317 SPDYE2BA6NHP3 402 aa14.88□□□□□ -0.03
SRP54-206ENST00000555317 SPDYE6P0CI01 402 aa14.88□□□□□ -0.03
SRP54-206ENST00000555317 NF2P35240 595 aa14.88□□□□□ -0.03
SRP54-206ENST00000555317 TNNI3KQ59H18 835 aa14.88□□□□□ -0.03
SRP54-206ENST00000555317 TEKT1Q969V4 418 aa14.88□□□□□ -0.03
SRP54-206ENST00000555317 CDCA5Q96FF9 252 aa14.88□□□□□ -0.03
SRP54-206ENST00000555317 VEZTQ9HBM0 779 aa14.88□□□□□ -0.03
SRP54-206ENST00000555317 EXOC6BQ9Y2D4 811 aa14.88□□□□□ -0.03
SRP54-206ENST00000555317 FPGT-TNNI3KV9GXZ4 949 aa14.88□□□□□ -0.03
SRP54-206ENST00000555317 CNTNAP1P78357 1384 aa14.87□□□□□ -0.03
SRP54-206ENST00000555317 LDHBP07195 334 aaKnown RBP14.87□□□□□ -0.03
SRP54-206ENST00000555317 CRKP46108 304 aa14.87□□□□□ -0.03
SRP54-206ENST00000555317 RASGRF1Q13972 1273 aa14.87□□□□□ -0.03
SRP54-206ENST00000555317 CCDC158Q5M9N0 1113 aa14.87□□□□□ -0.03
SRP54-206ENST00000555317 TTC39AQ5SRH9 613 aa14.87□□□□□ -0.03
SRP54-206ENST00000555317 DNAJC5GQ8N7S2 189 aa14.87□□□□□ -0.03
SRP54-206ENST00000555317 C2orf69Q8N8R5 385 aa14.87□□□□□ -0.03
SRP54-206ENST00000555317 COL1A1P02452 1464 aaPredicted RBP14.87□□□□□ -0.03
SRP54-206ENST00000555317 PCNTO95613 3336 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms