RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 ZNF837Q96EG3 531 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-211ENST00000554995 NECAB3Q96P71 396 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-211ENST00000554995 NT5C1AQ9BXI3 368 aa8.13□□□□□ -1.11
PSEN1-211ENST00000554995 OSBPL2Q9H1P3 480 aa8.13□□□□□ -1.11
PSEN1-211ENST00000554995 GINM1Q9NU53 330 aa8.13□□□□□ -1.11
PSEN1-211ENST00000554995 EFR3BQ9Y2G0 817 aa8.13□□□□□ -1.11
PSEN1-211ENST00000554995 J3QW42 95 aa8.12□□□□□ -1.11
PSEN1-211ENST00000554995 ENC1O14682 589 aa8.12□□□□□ -1.11
PSEN1-211ENST00000554995 PF4P02776 101 aa8.12□□□□□ -1.11
PSEN1-211ENST00000554995 GPLD1P80108 840 aa8.12□□□□□ -1.11
PSEN1-211ENST00000554995 MLLT1Q03111 559 aaPredicted RBP8.12□□□□□ -1.11
PSEN1-211ENST00000554995 FAM182BQ5T319 152 aa8.12□□□□□ -1.11
PSEN1-211ENST00000554995 TRPM4Q8TD43 1214 aa8.12□□□□□ -1.11
PSEN1-211ENST00000554995 ASAP3Q8TDY4 903 aa8.12□□□□□ -1.11
PSEN1-211ENST00000554995 GTPBP3Q969Y2 492 aaKnown RBP8.12□□□□□ -1.11
PSEN1-211ENST00000554995 RASSF4Q9H2L5 321 aa8.12□□□□□ -1.11
PSEN1-211ENST00000554995 ZNF576Q9H609 170 aa8.12□□□□□ -1.11
PSEN1-211ENST00000554995 SEC31BQ9NQW1 1179 aa8.12□□□□□ -1.11
PSEN1-211ENST00000554995 TMA7Q9Y2S6 64 aaKnown RBP8.12□□□□□ -1.11
PSEN1-211ENST00000554995 SUPT16HQ9Y5B9 1047 aaKnown RBP8.12□□□□□ -1.11
PSEN1-211ENST00000554995 LOC102724428A0A0B4J2F2 783 aa8.11□□□□□ -1.11
PSEN1-211ENST00000554995 PDE2AO00408 941 aaPredicted RBP8.11□□□□□ -1.11
PSEN1-211ENST00000554995 GREM1O60565 184 aa8.11□□□□□ -1.11
PSEN1-211ENST00000554995 FGFR3P22607 806 aa8.11□□□□□ -1.11
PSEN1-211ENST00000554995 SIK1P57059 783 aa8.11□□□□□ -1.11
PSEN1-211ENST00000554995 ATP11AP98196 1134 aa8.11□□□□□ -1.11
PSEN1-211ENST00000554995 LMNB2Q03252 620 aa8.11□□□□□ -1.11
PSEN1-211ENST00000554995 FAAP100Q0VG06 881 aa8.11□□□□□ -1.11
PSEN1-211ENST00000554995 CAMK2GQ13555 558 aaPredicted RBP8.11□□□□□ -1.11
PSEN1-211ENST00000554995 NEUROD1Q13562 356 aa8.11□□□□□ -1.11
PSEN1-211ENST00000554995 TTBK2Q6IQ55 1244 aa8.11□□□□□ -1.11
PSEN1-211ENST00000554995 CKAP2LQ8IYA6 745 aa8.11□□□□□ -1.11
PSEN1-211ENST00000554995 GMCL1Q96IK5 515 aa8.11□□□□□ -1.11
PSEN1-211ENST00000554995 PBX4Q9BYU1 374 aa8.11□□□□□ -1.11
PSEN1-211ENST00000554995 ZNF408Q9H9D4 720 aa8.11□□□□□ -1.11
PSEN1-211ENST00000554995 TLDC2A0PJX2 215 aa8.1□□□□□ -1.11
PSEN1-211ENST00000554995 PAGE1O75459 146 aa8.1□□□□□ -1.11
PSEN1-211ENST00000554995 TFE3P19532 575 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-211ENST00000554995 SOX9P48436 509 aa8.1□□□□□ -1.11
PSEN1-211ENST00000554995 RPS26P11Q5JNZ5 115 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-211ENST00000554995 SNAP47Q5SQN1 464 aa8.1□□□□□ -1.11
PSEN1-211ENST00000554995 AGMOQ6ZNB7 445 aa8.1□□□□□ -1.11
PSEN1-211ENST00000554995 HFE2Q6ZVN8 426 aa8.1□□□□□ -1.11
PSEN1-211ENST00000554995 GOLM1Q8NBJ4 401 aa8.1□□□□□ -1.11
PSEN1-211ENST00000554995 UBP1Q9NZI7 540 aa8.1□□□□□ -1.11
PSEN1-211ENST00000554995 GPN3Q9UHW5 284 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-211ENST00000554995 ITGA6P23229 1130 aa8.09□□□□□ -1.11
PSEN1-211ENST00000554995 COL9A2Q14055 689 aaPredicted RBP8.09□□□□□ -1.11
PSEN1-211ENST00000554995 BMS1Q14692 1282 aaKnown RBP8.09□□□□□ -1.11
PSEN1-211ENST00000554995 MUC3BQ9H195 1237 aa8.09□□□□□ -1.11
PSEN1-211ENST00000554995 IGFLR1Q9H665 355 aa8.09□□□□□ -1.11
PSEN1-211ENST00000554995 STRIP2Q9ULQ0 834 aa8.09□□□□□ -1.11
PSEN1-211ENST00000554995 PHF24Q9UPV7 400 aa8.09□□□□□ -1.11
PSEN1-211ENST00000554995 MRVI1Q9Y6F6 885 aa8.09□□□□□ -1.11
PSEN1-211ENST00000554995 RNF225M0QZC1 329 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-211ENST00000554995 GHRHP01286 108 aa8.08□□□□□ -1.12
PSEN1-211ENST00000554995 IGHA1P01876 353 aa8.08□□□□□ -1.12
PSEN1-211ENST00000554995 ETFBP38117 255 aa8.08□□□□□ -1.12
PSEN1-211ENST00000554995 CRKP46108 304 aa8.08□□□□□ -1.12
PSEN1-211ENST00000554995 RPS26P62854 115 aaKnown RBP8.08□□□□□ -1.12
PSEN1-211ENST00000554995 CTBSQ01459 385 aa8.08□□□□□ -1.12
PSEN1-211ENST00000554995 APOBRQ0VD83 1088 aa8.08□□□□□ -1.12
PSEN1-211ENST00000554995 NBPF6Q5VWK0 638 aa8.08□□□□□ -1.12
PSEN1-211ENST00000554995 PCNX4Q63HM2 1172 aa8.08□□□□□ -1.12
PSEN1-211ENST00000554995 NBPF4Q96M43 638 aa8.08□□□□□ -1.12
PSEN1-211ENST00000554995 DNAJB12Q9NXW2 375 aaKnown RBP8.08□□□□□ -1.12
PSEN1-211ENST00000554995 TBX22Q9Y458 520 aa8.08□□□□□ -1.12
PSEN1-211ENST00000554995 EIF2AK2P19525 551 aaKnown RBP8.07□□□□□ -1.12
PSEN1-211ENST00000554995 ZNF157P51786 506 aaPredicted RBP8.07□□□□□ -1.12
PSEN1-211ENST00000554995 TBC1D8BQ0IIM8 1120 aa8.07□□□□□ -1.12
PSEN1-211ENST00000554995 SERINC3Q13530 473 aa8.07□□□□□ -1.12
PSEN1-211ENST00000554995 FAM196AQ6ZSG2 479 aa8.07□□□□□ -1.12
PSEN1-211ENST00000554995 NKD1Q969G9 470 aa8.07□□□□□ -1.12
PSEN1-211ENST00000554995 POP1Q99575 1024 aaKnown RBP8.07□□□□□ -1.12
PSEN1-211ENST00000554995 UBE2OQ9C0C9 1292 aaKnown RBP8.07□□□□□ -1.12
PSEN1-211ENST00000554995 RBSNQ9H1K0 784 aa8.07□□□□□ -1.12
PSEN1-211ENST00000554995 TMEM39AQ9NV64 488 aa8.07□□□□□ -1.12
PSEN1-211ENST00000554995 PRR12Q9ULL5 1215 aa8.07□□□□□ -1.12
PSEN1-211ENST00000554995 GPR25O00155 361 aa8.06□□□□□ -1.12
PSEN1-211ENST00000554995 SDE2Q6IQ49 451 aa8.06□□□□□ -1.12
PSEN1-211ENST00000554995 GPAT2Q6NUI2 795 aa8.06□□□□□ -1.12
PSEN1-211ENST00000554995 ZNF746Q6NUN9 644 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-211ENST00000554995 ANKS3Q6ZW76 656 aa8.06□□□□□ -1.12
PSEN1-211ENST00000554995 SYT9Q86SS6 491 aa8.06□□□□□ -1.12
PSEN1-211ENST00000554995 TRIM42Q8IWZ5 723 aa8.06□□□□□ -1.12
PSEN1-211ENST00000554995 PSMG3-AS1Q96PY0 264 aa8.06□□□□□ -1.12
PSEN1-211ENST00000554995 CDK11AQ9UQ88 783 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-211ENST00000554995 PCDHB5Q9Y5E4 795 aa8.06□□□□□ -1.12
PSEN1-211ENST00000554995 K7ELQ4 463 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-211ENST00000554995 SMNDC1O75940 238 aaKnown RBP eCLIP8.05□□□□□ -1.12
PSEN1-211ENST00000554995 NFE2L2Q16236 605 aa8.05□□□□□ -1.12
PSEN1-211ENST00000554995 PCSK7Q16549 785 aa8.05□□□□□ -1.12
PSEN1-211ENST00000554995 RASIP1Q5U651 963 aa8.05□□□□□ -1.12
PSEN1-211ENST00000554995 CEP135Q66GS9 1140 aa8.05□□□□□ -1.12
PSEN1-211ENST00000554995 BNC2Q6ZN30 1099 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-211ENST00000554995 SLITRK4Q8IW52 837 aa8.05□□□□□ -1.12
PSEN1-211ENST00000554995 CPLX3Q8WVH0 158 aa8.05□□□□□ -1.12
PSEN1-211ENST00000554995 BSNDQ8WZ55 320 aa8.05□□□□□ -1.12
PSEN1-211ENST00000554995 TRERF1Q96PN7 1200 aa8.05□□□□□ -1.12
PSEN1-211ENST00000554995 CLEC4MQ9H2X3 399 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms