RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ZNF385CQ66K41 422 aaPredicted RBP8.7□□□□□ -1.02
SCFD1-212ENST00000554486 C16orf46Q6P387 395 aa8.7□□□□□ -1.02
SCFD1-212ENST00000554486 CDK19Q9BWU1 502 aa8.7□□□□□ -1.02
SCFD1-212ENST00000554486 ANO2Q9NQ90 1003 aa8.7□□□□□ -1.02
SCFD1-212ENST00000554486 KLK14Q9P0G3 267 aa8.7□□□□□ -1.02
SCFD1-212ENST00000554486 ATXN7L1Q9ULK2 861 aaPredicted RBP8.7□□□□□ -1.02
SCFD1-212ENST00000554486 GJA3Q9Y6H8 435 aa8.7□□□□□ -1.02
SCFD1-212ENST00000554486 CDC42BPGQ6DT37 1551 aa8.69□□□□□ -1.02
SCFD1-212ENST00000554486 FMN2Q9NZ56 1722 aa8.69□□□□□ -1.02
SCFD1-212ENST00000554486 ZNF211Q13398 564 aaPredicted RBP8.69□□□□□ -1.02
SCFD1-212ENST00000554486 UBAP2LQ14157 1087 aaKnown RBP8.69□□□□□ -1.02
SCFD1-212ENST00000554486 BICDL1Q6ZP65 573 aa8.69□□□□□ -1.02
SCFD1-212ENST00000554486 ZNF280CQ8ND82 737 aa8.69□□□□□ -1.02
SCFD1-212ENST00000554486 VTI1AQ96AJ9 217 aa8.69□□□□□ -1.02
SCFD1-212ENST00000554486 PUS7Q96PZ0 661 aaKnown RBP8.69□□□□□ -1.02
SCFD1-212ENST00000554486 MYOM1P52179 1685 aa8.69□□□□□ -1.02
SCFD1-212ENST00000554486 RGPD8O14715 1765 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-212ENST00000554486 A0A1W2PNR3 127 aa8.68□□□□□ -1.02
SCFD1-212ENST00000554486 HELQQ8TDG4 1101 aa8.68□□□□□ -1.02
SCFD1-212ENST00000554486 C19orf44Q9H6X5 657 aa8.68□□□□□ -1.02
SCFD1-212ENST00000554486 NEUROD4Q9HD90 331 aa8.68□□□□□ -1.02
SCFD1-212ENST00000554486 EGFL7Q9UHF1 273 aa8.68□□□□□ -1.02
SCFD1-212ENST00000554486 PCDHGC4Q9Y5F7 938 aa8.68□□□□□ -1.02
SCFD1-212ENST00000554486 PRR36Q9H6K5 1346 aa8.68□□□□□ -1.02
SCFD1-212ENST00000554486 USP32Q8NFA0 1604 aa8.68□□□□□ -1.02
SCFD1-212ENST00000554486 SOWAHDA6NJG2 315 aa8.67□□□□□ -1.02
SCFD1-212ENST00000554486 ZBTB39O15060 712 aa8.67□□□□□ -1.02
SCFD1-212ENST00000554486 ICMTO60725 284 aa8.67□□□□□ -1.02
SCFD1-212ENST00000554486 ABL1P00519 1130 aa8.67□□□□□ -1.02
SCFD1-212ENST00000554486 NPR3P17342 541 aa8.67□□□□□ -1.02
SCFD1-212ENST00000554486 ATP7BP35670 1465 aa8.67□□□□□ -1.02
SCFD1-212ENST00000554486 DCCP43146 1447 aa8.67□□□□□ -1.02
SCFD1-212ENST00000554486 DGKZQ13574 1117 aa8.67□□□□□ -1.02
SCFD1-212ENST00000554486 LYPD4Q6UWN0 246 aa8.67□□□□□ -1.02
SCFD1-212ENST00000554486 WHAMMQ8TF30 809 aa8.67□□□□□ -1.02
SCFD1-212ENST00000554486 HSH2DQ96JZ2 352 aa8.67□□□□□ -1.02
SCFD1-212ENST00000554486 SUSD3Q96L08 255 aa8.67□□□□□ -1.02
SCFD1-212ENST00000554486 POLR3GLQ9BT43 218 aa8.67□□□□□ -1.02
SCFD1-212ENST00000554486 ZCCHC2Q9C0B9 1178 aaKnown RBP8.67□□□□□ -1.02
SCFD1-212ENST00000554486 DMGDHQ9UI17 866 aaKnown RBP8.67□□□□□ -1.02
SCFD1-212ENST00000554486 HCN2Q9UL51 889 aa8.67□□□□□ -1.02
SCFD1-212ENST00000554486 ADAMTS8Q9UP79 889 aa8.67□□□□□ -1.02
SCFD1-212ENST00000554486 TOPAZ1Q8N9V7 1692 aa8.66□□□□□ -1.02
SCFD1-212ENST00000554486 ANKARQ7Z5J8 1434 aa8.66□□□□□ -1.02
SCFD1-212ENST00000554486 MSH6P52701 1360 aa8.66□□□□□ -1.02
SCFD1-212ENST00000554486 ATXN7O15265 892 aaPredicted RBP8.66□□□□□ -1.02
SCFD1-212ENST00000554486 CELA2BP08218 269 aaPredicted RBP8.66□□□□□ -1.02
SCFD1-212ENST00000554486 C11orf91Q3C1V1 193 aa8.66□□□□□ -1.02
SCFD1-212ENST00000554486 ETFBKMTQ8IXQ9 262 aa8.66□□□□□ -1.02
SCFD1-212ENST00000554486 RHPN1Q8TCX5 695 aa8.66□□□□□ -1.02
SCFD1-212ENST00000554486 NUDT16Q96DE0 195 aaKnown RBP8.66□□□□□ -1.02
SCFD1-212ENST00000554486 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.66□□□□□ -1.02
SCFD1-212ENST00000554486 BNIP3LO60238 219 aa8.65□□□□□ -1.02
SCFD1-212ENST00000554486 BCRP11274 1271 aa8.65□□□□□ -1.02
SCFD1-212ENST00000554486 FGFR3P22607 806 aa8.65□□□□□ -1.02
SCFD1-212ENST00000554486 MARSP56192 900 aaKnown RBP8.65□□□□□ -1.02
SCFD1-212ENST00000554486 FKBP4Q02790 459 aaKnown RBP eCLIP8.65□□□□□ -1.02
SCFD1-212ENST00000554486 DDX10Q13206 875 aaKnown RBP8.65□□□□□ -1.02
SCFD1-212ENST00000554486 ABHD17AQ96GS6 310 aa8.65□□□□□ -1.02
SCFD1-212ENST00000554486 GZF1Q9H116 711 aaPredicted RBP8.65□□□□□ -1.02
SCFD1-212ENST00000554486 SLC12A5Q9H2X9 1139 aa8.65□□□□□ -1.02
SCFD1-212ENST00000554486 LRRC4BQ9NT99 713 aa8.65□□□□□ -1.02
SCFD1-212ENST00000554486 GPC6Q9Y625 555 aaPredicted RBP8.65□□□□□ -1.02
SCFD1-212ENST00000554486 MST1RQ04912 1400 aa8.64□□□□□ -1.03
SCFD1-212ENST00000554486 ITSN1Q15811 1721 aa8.64□□□□□ -1.03
SCFD1-212ENST00000554486 PATL2C9JE40 543 aaKnown RBP8.64□□□□□ -1.03
SCFD1-212ENST00000554486 RNF225M0QZC1 329 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-212ENST00000554486 ARHGEF15O94989 841 aa8.64□□□□□ -1.03
SCFD1-212ENST00000554486 BMP4P12644 408 aa8.64□□□□□ -1.03
SCFD1-212ENST00000554486 ATF3P18847 181 aa8.64□□□□□ -1.03
SCFD1-212ENST00000554486 OXCT2Q9BYC2 517 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-212ENST00000554486 NDFIP2Q9NV92 336 aa8.64□□□□□ -1.03
SCFD1-212ENST00000554486 STIM2Q9P246 746 aa8.64□□□□□ -1.03
SCFD1-212ENST00000554486 MTMR7Q9Y216 660 aa8.64□□□□□ -1.03
SCFD1-212ENST00000554486 C1orf167Q5SNV9 1468 aa8.64□□□□□ -1.03
SCFD1-212ENST00000554486 CD163L1Q9NR16 1453 aa8.64□□□□□ -1.03
SCFD1-212ENST00000554486 PPIP5K1Q6PFW1 1433 aa8.63□□□□□ -1.03
SCFD1-212ENST00000554486 NINLQ9Y2I6 1382 aa8.63□□□□□ -1.03
SCFD1-212ENST00000554486 MPSTP25325 297 aa8.63□□□□□ -1.03
SCFD1-212ENST00000554486 ARHGAP4P98171 946 aa8.63□□□□□ -1.03
SCFD1-212ENST00000554486 LRRC69Q6ZNQ3 347 aa8.63□□□□□ -1.03
SCFD1-212ENST00000554486 TMC1Q8TDI8 760 aa8.63□□□□□ -1.03
SCFD1-212ENST00000554486 ACDQ96AP0 544 aa8.63□□□□□ -1.03
SCFD1-212ENST00000554486 IFT43Q96FT9 208 aa8.63□□□□□ -1.03
SCFD1-212ENST00000554486 GDF2Q9UK05 429 aaPredicted RBP8.63□□□□□ -1.03
SCFD1-212ENST00000554486 ZBTB7CA1YPR0 619 aa8.62□□□□□ -1.03
SCFD1-212ENST00000554486 H3BRB1 525 aa8.62□□□□□ -1.03
SCFD1-212ENST00000554486 OPLAHO14841 1288 aa8.62□□□□□ -1.03
SCFD1-212ENST00000554486 KHNYNO15037 678 aaKnown RBP8.62□□□□□ -1.03
SCFD1-212ENST00000554486 GRNP28799 593 aaKnown RBP8.62□□□□□ -1.03
SCFD1-212ENST00000554486 SF3B2Q13435 895 aaKnown RBP8.62□□□□□ -1.03
SCFD1-212ENST00000554486 NEDD1Q8NHV4 660 aa8.62□□□□□ -1.03
SCFD1-212ENST00000554486 SCARF2Q96GP6 870 aaPredicted RBP8.62□□□□□ -1.03
SCFD1-212ENST00000554486 TUT1Q9H6E5 874 aaKnown RBP8.62□□□□□ -1.03
SCFD1-212ENST00000554486 PANK3Q9H999 370 aa8.62□□□□□ -1.03
SCFD1-212ENST00000554486 ANKIB1Q9P2G1 1089 aa8.62□□□□□ -1.03
SCFD1-212ENST00000554486 AKAP12Q02952 1782 aa8.62□□□□□ -1.03
SCFD1-212ENST00000554486 ANKRD36BQ8N2N9 1353 aa8.61□□□□□ -1.03
SCFD1-212ENST00000554486 TGFBR3LH3BV60 316 aa8.61□□□□□ -1.03
SCFD1-212ENST00000554486 MAPTP10636 758 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms