RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 PCSK7Q16549 785 aa8.38□□□□□ -1.07
CHD8-207ENST00000554384 GDF6Q6KF10 455 aaPredicted RBP8.38□□□□□ -1.07
CHD8-207ENST00000554384 MICALL1Q8N3F8 863 aa8.38□□□□□ -1.07
CHD8-207ENST00000554384 RNF34Q969K3 372 aa8.38□□□□□ -1.07
CHD8-207ENST00000554384 SRCIN1Q9C0H9 1055 aa8.38□□□□□ -1.07
CHD8-207ENST00000554384 COPRSQ9NQ92 184 aa8.38□□□□□ -1.07
CHD8-207ENST00000554384 LRRC4BQ9NT99 713 aa8.38□□□□□ -1.07
CHD8-207ENST00000554384 SHISA8B8ZZ34 492 aa8.37□□□□□ -1.07
CHD8-207ENST00000554384 PROCP04070 461 aa8.37□□□□□ -1.07
CHD8-207ENST00000554384 EPXP11678 715 aa8.37□□□□□ -1.07
CHD8-207ENST00000554384 ERCC5P28715 1186 aaPredicted RBP8.37□□□□□ -1.07
CHD8-207ENST00000554384 ZNF394Q53GI3 561 aa8.37□□□□□ -1.07
CHD8-207ENST00000554384 TPTE2Q6XPS3 522 aa8.37□□□□□ -1.07
CHD8-207ENST00000554384 PODNQ7Z5L7 613 aa8.37□□□□□ -1.07
CHD8-207ENST00000554384 GOLGA6L1Q8N7Z2 621 aa8.37□□□□□ -1.07
CHD8-207ENST00000554384 RBSNQ9H1K0 784 aa8.37□□□□□ -1.07
CHD8-207ENST00000554384 PCDHGB7Q9Y5F8 929 aa8.37□□□□□ -1.07
CHD8-207ENST00000554384 SMNDC1O75940 238 aaKnown RBP eCLIP8.36□□□□□ -1.07
CHD8-207ENST00000554384 ALBP02768 609 aa8.36□□□□□ -1.07
CHD8-207ENST00000554384 MAP3K11Q16584 847 aa8.36□□□□□ -1.07
CHD8-207ENST00000554384 SLCO4C1Q6ZQN7 724 aa8.36□□□□□ -1.07
CHD8-207ENST00000554384 GALNT6Q8NCL4 622 aa8.36□□□□□ -1.07
CHD8-207ENST00000554384 GGT7Q9UJ14 662 aa8.36□□□□□ -1.07
CHD8-207ENST00000554384 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.35□□□□□ -1.07
CHD8-207ENST00000554384 ADAM23O75077 832 aa8.35□□□□□ -1.07
CHD8-207ENST00000554384 ITPKAP23677 461 aa8.35□□□□□ -1.07
CHD8-207ENST00000554384 ITGAEP38570 1179 aa8.35□□□□□ -1.07
CHD8-207ENST00000554384 HGSNATQ68CP4 663 aa8.35□□□□□ -1.07
CHD8-207ENST00000554384 VN1R5Q7Z5H4 357 aa8.35□□□□□ -1.07
CHD8-207ENST00000554384 EDARADDQ8WWZ3 215 aa8.35□□□□□ -1.07
CHD8-207ENST00000554384 ZNF576Q9H609 170 aa8.35□□□□□ -1.07
CHD8-207ENST00000554384 METTL5Q9NRN9 209 aaKnown RBP8.35□□□□□ -1.07
CHD8-207ENST00000554384 GDF2Q9UK05 429 aaPredicted RBP8.35□□□□□ -1.07
CHD8-207ENST00000554384 RGS9O75916 674 aaPredicted RBP8.34□□□□□ -1.07
CHD8-207ENST00000554384 CELA3AP09093 270 aa8.34□□□□□ -1.07
CHD8-207ENST00000554384 ALAS2P22557 587 aa8.34□□□□□ -1.07
CHD8-207ENST00000554384 RACK1P63244 317 aaKnown RBP8.34□□□□□ -1.07
CHD8-207ENST00000554384 CCDC85BQ15834 202 aaPredicted RBP8.34□□□□□ -1.07
CHD8-207ENST00000554384 GRIK5Q16478 980 aa8.34□□□□□ -1.07
CHD8-207ENST00000554384 ZNF423Q2M1K9 1284 aa8.34□□□□□ -1.07
CHD8-207ENST00000554384 C20orf204Q6ZNR8 217 aa8.34□□□□□ -1.07
CHD8-207ENST00000554384 JPH1Q9HDC5 661 aaPredicted RBP8.34□□□□□ -1.07
CHD8-207ENST00000554384 SEC31BQ9NQW1 1179 aa8.34□□□□□ -1.07
CHD8-207ENST00000554384 SOX13Q9UN79 622 aa8.34□□□□□ -1.07
CHD8-207ENST00000554384 PAGE1O75459 146 aa8.33□□□□□ -1.08
CHD8-207ENST00000554384 EPHA1P21709 976 aa8.33□□□□□ -1.08
CHD8-207ENST00000554384 ST13P50502 369 aaKnown RBP8.33□□□□□ -1.08
CHD8-207ENST00000554384 TXNDC11Q6PKC3 985 aa8.33□□□□□ -1.08
CHD8-207ENST00000554384 BSNDQ8WZ55 320 aa8.33□□□□□ -1.08
CHD8-207ENST00000554384 BTBD6Q96KE9 485 aa8.33□□□□□ -1.08
CHD8-207ENST00000554384 KRTAP9-2Q9BYQ4 174 aa8.33□□□□□ -1.08
CHD8-207ENST00000554384 ACBD3Q9H3P7 528 aa8.33□□□□□ -1.08
CHD8-207ENST00000554384 KRBA1A5PL33 1030 aa8.32□□□□□ -1.08
CHD8-207ENST00000554384 XRCC5P13010 732 aaKnown RBP8.32□□□□□ -1.08
CHD8-207ENST00000554384 PTPRAP18433 802 aa8.32□□□□□ -1.08
CHD8-207ENST00000554384 BAG6P46379 1132 aa8.32□□□□□ -1.08
CHD8-207ENST00000554384 TNNI2P48788 182 aa8.32□□□□□ -1.08
CHD8-207ENST00000554384 AFF1P51825 1210 aaKnown RBP8.32□□□□□ -1.08
CHD8-207ENST00000554384 IL22RA1Q8N6P7 574 aa8.32□□□□□ -1.08
CHD8-207ENST00000554384 SRA1Q9HD15 236 aaKnown RBP8.32□□□□□ -1.08
CHD8-207ENST00000554384 FRRS1LQ9P0K9 344 aa8.32□□□□□ -1.08
CHD8-207ENST00000554384 MINDY4BA8MYZ0 360 aa8.31□□□□□ -1.08
CHD8-207ENST00000554384 M0R082 166 aa8.31□□□□□ -1.08
CHD8-207ENST00000554384 HOXB4P17483 251 aaPredicted RBP8.31□□□□□ -1.08
CHD8-207ENST00000554384 COL8A1P27658 744 aa8.31□□□□□ -1.08
CHD8-207ENST00000554384 CDC27P30260 824 aa8.31□□□□□ -1.08
CHD8-207ENST00000554384 PTPN12Q05209 780 aaKnown RBP8.31□□□□□ -1.08
CHD8-207ENST00000554384 PCDH1Q08174 1060 aa8.31□□□□□ -1.08
CHD8-207ENST00000554384 CHSY3Q70JA7 882 aa8.31□□□□□ -1.08
CHD8-207ENST00000554384 HS2ST1Q7LGA3 356 aa8.31□□□□□ -1.08
CHD8-207ENST00000554384 ZNF417Q8TAU3 575 aa8.31□□□□□ -1.08
CHD8-207ENST00000554384 NECAB3Q96P71 396 aaPredicted RBP8.31□□□□□ -1.08
CHD8-207ENST00000554384 ZNF587Q96SQ5 575 aaPredicted RBP8.31□□□□□ -1.08
CHD8-207ENST00000554384 ADAM19Q9H013 955 aa8.31□□□□□ -1.08
CHD8-207ENST00000554384 KBTBD4Q9NVX7 518 aa8.31□□□□□ -1.08
CHD8-207ENST00000554384 GPN3Q9UHW5 284 aaPredicted RBP8.31□□□□□ -1.08
CHD8-207ENST00000554384 DDX41Q9UJV9 622 aaKnown RBP8.31□□□□□ -1.08
CHD8-207ENST00000554384 SOX1O00570 391 aaPredicted RBP8.3□□□□□ -1.08
CHD8-207ENST00000554384 ENC1O14682 589 aa8.3□□□□□ -1.08
CHD8-207ENST00000554384 RASIP1Q5U651 963 aa8.3□□□□□ -1.08
CHD8-207ENST00000554384 ERMP1Q7Z2K6 904 aa8.3□□□□□ -1.08
CHD8-207ENST00000554384 USP48Q86UV5 1035 aa8.3□□□□□ -1.08
CHD8-207ENST00000554384 STK35Q8TDR2 534 aa8.3□□□□□ -1.08
CHD8-207ENST00000554384 CLEC4MQ9H2X3 399 aaPredicted RBP8.3□□□□□ -1.08
CHD8-207ENST00000554384 PPM1HQ9ULR3 514 aa8.3□□□□□ -1.08
CHD8-207ENST00000554384 TLR6Q9Y2C9 796 aa8.3□□□□□ -1.08
CHD8-207ENST00000554384 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.3□□□□□ -1.08
CHD8-207ENST00000554384 LINC01387J3KSC0 135 aa8.29□□□□□ -1.08
CHD8-207ENST00000554384 TTC9Q92623 222 aa8.29□□□□□ -1.08
CHD8-207ENST00000554384 KRTAP9-6A0A140TA67 174 aa8.28□□□□□ -1.08
CHD8-207ENST00000554384 IGSF3O75054 1194 aa8.28□□□□□ -1.08
CHD8-207ENST00000554384 ESRRAP11474 423 aaPredicted RBP8.28□□□□□ -1.08
CHD8-207ENST00000554384 AMPD1P23109 780 aa8.28□□□□□ -1.08
CHD8-207ENST00000554384 NAALADL2Q58DX5 795 aa8.28□□□□□ -1.08
CHD8-207ENST00000554384 SV2BQ7L1I2 683 aa8.28□□□□□ -1.08
CHD8-207ENST00000554384 SLC7A3Q8WY07 619 aa8.28□□□□□ -1.08
CHD8-207ENST00000554384 NOC4LQ9BVI4 516 aaKnown RBP8.28□□□□□ -1.08
CHD8-207ENST00000554384 CARD10Q9BWT7 1032 aa8.28□□□□□ -1.08
CHD8-207ENST00000554384 RRAGCQ9HB90 399 aa8.28□□□□□ -1.08
CHD8-207ENST00000554384 MKL2Q9ULH7 1088 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms