RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PCDHGC4Q9Y5F7 938 aa7.91□□□□□ -1.14
VPS33B-203ENST00000554264 ZBED9Q6R2W3 1325 aa7.91□□□□□ -1.14
VPS33B-203ENST00000554264 ABCC11Q96J66 1382 aa7.91□□□□□ -1.14
VPS33B-203ENST00000554264 SBNO1A3KN83 1393 aa7.9□□□□□ -1.14
VPS33B-203ENST00000554264 ARHGEF10O15013 1369 aa7.9□□□□□ -1.14
VPS33B-203ENST00000554264 KTN1Q86UP2 1357 aaKnown RBP7.9□□□□□ -1.14
VPS33B-203ENST00000554264 COX20Q5RI15 118 aa7.9□□□□□ -1.14
VPS33B-203ENST00000554264 WAPLQ7Z5K2 1190 aa7.9□□□□□ -1.14
VPS33B-203ENST00000554264 STRN4Q9NRL3 753 aa7.9□□□□□ -1.14
VPS33B-203ENST00000554264 STK26Q9P289 416 aa7.9□□□□□ -1.14
VPS33B-203ENST00000554264 BRWD3Q6RI45 1802 aa7.89□□□□□ -1.15
VPS33B-203ENST00000554264 PPLO60437 1756 aa7.89□□□□□ -1.15
VPS33B-203ENST00000554264 ROCK2O75116 1388 aaKnown RBP7.89□□□□□ -1.15
VPS33B-203ENST00000554264 ANKRD30BQ9BXX2 1392 aa7.89□□□□□ -1.15
VPS33B-203ENST00000554264 ADGRF5Q8IZF2 1346 aa7.89□□□□□ -1.15
VPS33B-203ENST00000554264 C2CD2LO14523 706 aa7.89□□□□□ -1.15
VPS33B-203ENST00000554264 ATXN7O15265 892 aaPredicted RBP7.89□□□□□ -1.15
VPS33B-203ENST00000554264 CTBSQ01459 385 aa7.89□□□□□ -1.15
VPS33B-203ENST00000554264 TNP2Q05952 138 aa7.89□□□□□ -1.15
VPS33B-203ENST00000554264 NAA30Q147X3 362 aaPredicted RBP7.89□□□□□ -1.15
VPS33B-203ENST00000554264 GRIN2CQ14957 1233 aa7.89□□□□□ -1.15
VPS33B-203ENST00000554264 RTN1Q16799 776 aa7.89□□□□□ -1.15
VPS33B-203ENST00000554264 FAM26DQ5JW98 314 aa7.89□□□□□ -1.15
VPS33B-203ENST00000554264 CFHR5Q9BXR6 569 aa7.89□□□□□ -1.15
VPS33B-203ENST00000554264 SEPT3Q9UH03 358 aa7.89□□□□□ -1.15
VPS33B-203ENST00000554264 GPC6Q9Y625 555 aaPredicted RBP7.89□□□□□ -1.15
VPS33B-203ENST00000554264 NWD2Q9ULI1 1742 aa7.89□□□□□ -1.15
VPS33B-203ENST00000554264 PLEKHH1Q9ULM0 1364 aa7.88□□□□□ -1.15
VPS33B-203ENST00000554264 DCDC2BA2VCK2 349 aa7.88□□□□□ -1.15
VPS33B-203ENST00000554264 EFSO43281 561 aa7.88□□□□□ -1.15
VPS33B-203ENST00000554264 MAPTP10636 758 aaKnown RBP7.88□□□□□ -1.15
VPS33B-203ENST00000554264 HNRNPUQ00839 825 aaKnown RBP eCLIP7.88□□□□□ -1.15
VPS33B-203ENST00000554264 SAMD5Q5TGI4 173 aa7.88□□□□□ -1.15
VPS33B-203ENST00000554264 FOXR1Q6PIV2 292 aa7.88□□□□□ -1.15
VPS33B-203ENST00000554264 MYO19Q96H55 970 aa7.88□□□□□ -1.15
VPS33B-203ENST00000554264 DMGDHQ9UI17 866 aaKnown RBP7.88□□□□□ -1.15
VPS33B-203ENST00000554264 FMN2Q9NZ56 1722 aa7.88□□□□□ -1.15
VPS33B-203ENST00000554264 NRXN1Q9ULB1 1477 aa7.87□□□□□ -1.15
VPS33B-203ENST00000554264 DISP2A7MBM2 1401 aa7.87□□□□□ -1.15
VPS33B-203ENST00000554264 CCDC7Q96M83 1385 aa7.87□□□□□ -1.15
VPS33B-203ENST00000554264 KNDC1Q76NI1 1749 aa7.87□□□□□ -1.15
VPS33B-203ENST00000554264 PLCH1Q4KWH8 1693 aa7.87□□□□□ -1.15
VPS33B-203ENST00000554264 FAM83GA6ND36 823 aa7.87□□□□□ -1.15
VPS33B-203ENST00000554264 KHNYNO15037 678 aaKnown RBP7.87□□□□□ -1.15
VPS33B-203ENST00000554264 DGKZQ13574 1117 aa7.87□□□□□ -1.15
VPS33B-203ENST00000554264 R3HDM1Q15032 1099 aaKnown RBP7.87□□□□□ -1.15
VPS33B-203ENST00000554264 FIGNL1Q6PIW4 674 aa7.87□□□□□ -1.15
VPS33B-203ENST00000554264 COL26A1Q96A83 441 aa7.87□□□□□ -1.15
VPS33B-203ENST00000554264 VTI1AQ96AJ9 217 aa7.87□□□□□ -1.15
VPS33B-203ENST00000554264 TRERF1Q96PN7 1200 aa7.87□□□□□ -1.15
VPS33B-203ENST00000554264 ATXN7L1Q9ULK2 861 aaPredicted RBP7.87□□□□□ -1.15
VPS33B-203ENST00000554264 USTQ9Y2C2 406 aa7.87□□□□□ -1.15
VPS33B-203ENST00000554264 GJA3Q9Y6H8 435 aa7.87□□□□□ -1.15
VPS33B-203ENST00000554264 YTHDC2Q9H6S0 1430 aaKnown RBP7.86□□□□□ -1.15
VPS33B-203ENST00000554264 WASHC2AQ641Q2 1341 aa7.86□□□□□ -1.15
VPS33B-203ENST00000554264 FAM157BP0CG42 384 aa7.86□□□□□ -1.15
VPS33B-203ENST00000554264 FGFR3P22607 806 aa7.86□□□□□ -1.15
VPS33B-203ENST00000554264 SFSWAPQ12872 951 aaKnown RBP7.86□□□□□ -1.15
VPS33B-203ENST00000554264 TMEM132EQ6IEE7 984 aa7.86□□□□□ -1.15
VPS33B-203ENST00000554264 WHAMMQ8TF30 809 aa7.86□□□□□ -1.15
VPS33B-203ENST00000554264 MBIPQ9NS73 344 aa7.86□□□□□ -1.15
VPS33B-203ENST00000554264 BTG4Q9NY30 223 aa7.86□□□□□ -1.15
VPS33B-203ENST00000554264 PIK3C2GO75747 1445 aa7.86□□□□□ -1.15
VPS33B-203ENST00000554264 SMG6Q86US8 1419 aaKnown RBP7.86□□□□□ -1.15
VPS33B-203ENST00000554264 TNFRSF10BO14763 440 aa7.85□□□□□ -1.15
VPS33B-203ENST00000554264 SLURP2P0DP57 97 aa7.85□□□□□ -1.15
VPS33B-203ENST00000554264 HSPA5P11021 654 aaKnown RBP7.85□□□□□ -1.15
VPS33B-203ENST00000554264 CD33P20138 364 aa7.85□□□□□ -1.15
VPS33B-203ENST00000554264 MX2P20592 715 aa7.85□□□□□ -1.15
VPS33B-203ENST00000554264 GRNP28799 593 aaKnown RBP7.85□□□□□ -1.15
VPS33B-203ENST00000554264 C11orf91Q3C1V1 193 aa7.85□□□□□ -1.15
VPS33B-203ENST00000554264 RGL3Q3MIN7 710 aa7.85□□□□□ -1.15
VPS33B-203ENST00000554264 BTLAQ7Z6A9 289 aa7.85□□□□□ -1.15
VPS33B-203ENST00000554264 NEUROD4Q9HD90 331 aa7.85□□□□□ -1.15
VPS33B-203ENST00000554264 RGPD1P0DJD0 1748 aa7.85□□□□□ -1.15
VPS33B-203ENST00000554264 SPATA31E1Q6ZUB1 1445 aa7.85□□□□□ -1.15
VPS33B-203ENST00000554264 ANKARQ7Z5J8 1434 aa7.85□□□□□ -1.15
VPS33B-203ENST00000554264 PARD3Q8TEW0 1356 aa7.84□□□□□ -1.15
VPS33B-203ENST00000554264 SPATA31A5Q5VU36 1347 aa7.84□□□□□ -1.15
VPS33B-203ENST00000554264 SPATA31A7Q8IWB4 1347 aa7.84□□□□□ -1.15
VPS33B-203ENST00000554264 YY1P25490 414 aa7.84□□□□□ -1.15
VPS33B-203ENST00000554264 SRSF11Q05519 484 aaKnown RBP7.84□□□□□ -1.15
VPS33B-203ENST00000554264 TYRO3Q06418 890 aa7.84□□□□□ -1.15
VPS33B-203ENST00000554264 C16orf46Q6P387 395 aa7.84□□□□□ -1.15
VPS33B-203ENST00000554264 CEP63Q96MT8 703 aa7.84□□□□□ -1.15
VPS33B-203ENST00000554264 MPHOSPH9Q99550 1183 aa7.84□□□□□ -1.15
VPS33B-203ENST00000554264 PRKRIP1Q9H875 184 aaPredicted RBP7.84□□□□□ -1.15
VPS33B-203ENST00000554264 ANKIB1Q9P2G1 1089 aa7.84□□□□□ -1.15
VPS33B-203ENST00000554264 ADGRB2O60241 1585 aa7.84□□□□□ -1.15
VPS33B-203ENST00000554264 GPRASP1Q5JY77 1395 aa7.84□□□□□ -1.16
VPS33B-203ENST00000554264 ABCA3Q99758 1704 aa7.83□□□□□ -1.16
VPS33B-203ENST00000554264 TGFBR3LH3BV60 316 aa7.83□□□□□ -1.16
VPS33B-203ENST00000554264 OPLAHO14841 1288 aa7.83□□□□□ -1.16
VPS33B-203ENST00000554264 PTCD1O75127 700 aaKnown RBP7.83□□□□□ -1.16
VPS33B-203ENST00000554264 EZH2Q15910 746 aaKnown RBP7.83□□□□□ -1.16
VPS33B-203ENST00000554264 FAM196AQ6ZSG2 479 aa7.83□□□□□ -1.16
VPS33B-203ENST00000554264 ETFBKMTQ8IXQ9 262 aa7.83□□□□□ -1.16
VPS33B-203ENST00000554264 IFT43Q96FT9 208 aa7.83□□□□□ -1.16
VPS33B-203ENST00000554264 CAMKK2Q96RR4 588 aa7.83□□□□□ -1.16
VPS33B-203ENST00000554264 C14orf93Q9H972 538 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms